RNA–Protein interactions for RNA: ENST00000521690.1

LAMA4-216, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-216ENST00000521690 MEGF6O75095 1541 aa21.65■■□□□ 1.06
LAMA4-216ENST00000521690 OVOS2A0A0G2JMS6 1433 aa21.64■■□□□ 1.06
LAMA4-216ENST00000521690 DISP2A7MBM2 1401 aa21.64■■□□□ 1.06
LAMA4-216ENST00000521690 APAF1O14727 1248 aa21.64■■□□□ 1.05
LAMA4-216ENST00000521690 PLEKHO1Q53GL0 409 aaPredicted RBP21.64■■□□□ 1.05
LAMA4-216ENST00000521690 USP35Q9P2H5 1018 aa21.64■■□□□ 1.05
LAMA4-216ENST00000521690 PKD1L3Q7Z443 1732 aa21.63■■□□□ 1.05
LAMA4-216ENST00000521690 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
LAMA4-216ENST00000521690 TMPOP42166 694 aaKnown RBP21.62■■□□□ 1.05
LAMA4-216ENST00000521690 NFE2L2Q16236 605 aa21.62■■□□□ 1.05
LAMA4-216ENST00000521690 SPG7Q9UQ90 795 aa21.62■■□□□ 1.05
LAMA4-216ENST00000521690 HNRNPUQ00839 825 aaKnown RBP eCLIP21.61■■□□□ 1.05
LAMA4-216ENST00000521690 GJD4Q96KN9 370 aaPredicted RBP21.61■■□□□ 1.05
LAMA4-216ENST00000521690 MTHFSDQ2M296 383 aaKnown RBP21.6■■□□□ 1.05
LAMA4-216ENST00000521690 QTRT2Q9H974 415 aaKnown RBP21.6■■□□□ 1.05
LAMA4-216ENST00000521690 GLI3P10071 1580 aa21.59■■□□□ 1.05
LAMA4-216ENST00000521690 CCDC27Q2M243 656 aa21.59■■□□□ 1.05
LAMA4-216ENST00000521690 LMOD3Q0VAK6 560 aa21.58■■□□□ 1.05
LAMA4-216ENST00000521690 ZCRB1Q8TBF4 217 aaKnown RBP21.58■■□□□ 1.05
LAMA4-216ENST00000521690 RIPK4P57078 832 aa21.57■■□□□ 1.04
LAMA4-216ENST00000521690 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
LAMA4-216ENST00000521690 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
LAMA4-216ENST00000521690 DLG5Q8TDM6 1919 aa21.56■■□□□ 1.04
LAMA4-216ENST00000521690 THSD7AQ9UPZ6 1657 aa21.56■■□□□ 1.04
LAMA4-216ENST00000521690 ZBED9Q6R2W3 1325 aa21.55■■□□□ 1.04
LAMA4-216ENST00000521690 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
LAMA4-216ENST00000521690 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
LAMA4-216ENST00000521690 ONECUT3O60422 494 aaPredicted RBP21.55■■□□□ 1.04
LAMA4-216ENST00000521690 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
LAMA4-216ENST00000521690 ZNF530Q6P9A1 599 aaPredicted RBP21.55■■□□□ 1.04
LAMA4-216ENST00000521690 RRP7AQ9Y3A4 280 aaKnown RBP21.55■■□□□ 1.04
LAMA4-216ENST00000521690 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
LAMA4-216ENST00000521690 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
LAMA4-216ENST00000521690 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
LAMA4-216ENST00000521690 EXOC5O00471 708 aa21.54■■□□□ 1.04
LAMA4-216ENST00000521690 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
LAMA4-216ENST00000521690 FAM98CQ17RN3 349 aaKnown RBP21.54■■□□□ 1.04
LAMA4-216ENST00000521690 C1orf141Q5JVX7 400 aa21.54■■□□□ 1.04
LAMA4-216ENST00000521690 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
LAMA4-216ENST00000521690 SHANK3Q9BYB0 1731 aa21.54■■□□□ 1.04
LAMA4-216ENST00000521690 LRRC37A3O60309 1634 aa21.54■■□□□ 1.04
LAMA4-216ENST00000521690 IFNL2Q8IZJ0 200 aa21.53■■□□□ 1.04
LAMA4-216ENST00000521690 HSP90AB1P08238 724 aaKnown RBP21.52■■□□□ 1.04
LAMA4-216ENST00000521690 RBM6P78332 1123 aaKnown RBP21.52■■□□□ 1.04
LAMA4-216ENST00000521690 DDB1Q16531 1140 aa21.52■■□□□ 1.04
LAMA4-216ENST00000521690 RTF1Q92541 710 aaKnown RBP21.52■■□□□ 1.04
LAMA4-216ENST00000521690 TRIM35Q9UPQ4 493 aa21.52■■□□□ 1.04
LAMA4-216ENST00000521690 PHKG2P15735 406 aa21.51■■□□□ 1.03
LAMA4-216ENST00000521690 WWC1Q8IX03 1113 aa21.51■■□□□ 1.03
LAMA4-216ENST00000521690 ZNF521Q96K83 1311 aa21.51■■□□□ 1.03
LAMA4-216ENST00000521690 ADAMTS7Q9UKP4 1686 aa21.5■■□□□ 1.03
LAMA4-216ENST00000521690 CYP27B1O15528 508 aa21.49■■□□□ 1.03
LAMA4-216ENST00000521690 CALD1Q05682 793 aaKnown RBP21.49■■□□□ 1.03
LAMA4-216ENST00000521690 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
LAMA4-216ENST00000521690 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
LAMA4-216ENST00000521690 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
LAMA4-216ENST00000521690 NKX1-1Q15270 411 aaPredicted RBP21.48■■□□□ 1.03
LAMA4-216ENST00000521690 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
LAMA4-216ENST00000521690 PDE3BQ13370 1112 aa21.47■■□□□ 1.03
LAMA4-216ENST00000521690 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
LAMA4-216ENST00000521690 CEMIPQ8WUJ3 1361 aa21.47■■□□□ 1.03
LAMA4-216ENST00000521690 RXRBP28702 533 aa21.46■■□□□ 1.03
LAMA4-216ENST00000521690 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
LAMA4-216ENST00000521690 IL16Q14005 1332 aa21.46■■□□□ 1.03
LAMA4-216ENST00000521690 A0A0G2JS52 829 aa21.45■■□□□ 1.02
LAMA4-216ENST00000521690 MYT1Q01538 1121 aa21.45■■□□□ 1.02
LAMA4-216ENST00000521690 SCN11AQ9UI33 1791 aa21.45■■□□□ 1.02
LAMA4-216ENST00000521690 GOLGA2Q08379 1002 aa21.44■■□□□ 1.02
LAMA4-216ENST00000521690 SEPT12Q8IYM1 358 aa21.44■■□□□ 1.02
LAMA4-216ENST00000521690 IL17REQ8NFR9 667 aa21.44■■□□□ 1.02
LAMA4-216ENST00000521690 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
LAMA4-216ENST00000521690 RNMTO43148 476 aaKnown RBP21.43■■□□□ 1.02
LAMA4-216ENST00000521690 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
LAMA4-216ENST00000521690 MCM10Q7L590 875 aa21.43■■□□□ 1.02
LAMA4-216ENST00000521690 KDM6AO15550 1401 aaPredicted RBP21.43■■□□□ 1.02
LAMA4-216ENST00000521690 DCTN1Q14203 1278 aa21.42■■□□□ 1.02
LAMA4-216ENST00000521690 POTEAQ6S8J7 498 aa21.42■■□□□ 1.02
LAMA4-216ENST00000521690 MRC1P22897 1456 aa21.41■■□□□ 1.02
LAMA4-216ENST00000521690 MARCH10Q8NA82 808 aaPredicted RBP21.41■■□□□ 1.02
LAMA4-216ENST00000521690 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
LAMA4-216ENST00000521690 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
LAMA4-216ENST00000521690 LGR6Q9HBX8 967 aa21.4■■□□□ 1.02
LAMA4-216ENST00000521690 BABAM1Q9NWV8 329 aa21.4■■□□□ 1.02
LAMA4-216ENST00000521690 BCL9O00512 1426 aa21.39■■□□□ 1.02
LAMA4-216ENST00000521690 E9PSI1 815 aa21.39■■□□□ 1.01
LAMA4-216ENST00000521690 TEFQ10587 303 aa21.39■■□□□ 1.01
LAMA4-216ENST00000521690 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
LAMA4-216ENST00000521690 GNAI1P63096 354 aa21.38■■□□□ 1.01
LAMA4-216ENST00000521690 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
LAMA4-216ENST00000521690 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
LAMA4-216ENST00000521690 SLFN5Q08AF3 891 aa21.37■■□□□ 1.01
LAMA4-216ENST00000521690 TAF7Q15545 349 aaPredicted RBP21.37■■□□□ 1.01
LAMA4-216ENST00000521690 MYH16Q9H6N6 1097 aa21.37■■□□□ 1.01
LAMA4-216ENST00000521690 TOGARAM1Q9Y4F4 1720 aa21.36■■□□□ 1.01
LAMA4-216ENST00000521690 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
LAMA4-216ENST00000521690 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
LAMA4-216ENST00000521690 RGS12O14924 1447 aa21.36■■□□□ 1.01
LAMA4-216ENST00000521690 BRWD3Q6RI45 1802 aa21.36■■□□□ 1.01
LAMA4-216ENST00000521690 CHL1O00533 1208 aa21.35■■□□□ 1.01
LAMA4-216ENST00000521690 CABP4P57796 275 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms