RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 AMPHP49418 695 aa11.99□□□□□ -0.49
SPARC-204ENST00000521569 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
SPARC-204ENST00000521569 BTAF1O14981 1849 aa11.98□□□□□ -0.49
SPARC-204ENST00000521569 FAM208AQ9UK61 1670 aaKnown RBP11.98□□□□□ -0.49
SPARC-204ENST00000521569 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
SPARC-204ENST00000521569 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
SPARC-204ENST00000521569 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
SPARC-204ENST00000521569 INSRP06213 1382 aa11.97□□□□□ -0.49
SPARC-204ENST00000521569 GRIN3BO60391 1043 aa11.97□□□□□ -0.49
SPARC-204ENST00000521569 GPR162Q16538 588 aa11.97□□□□□ -0.49
SPARC-204ENST00000521569 FLAD1Q8NFF5 587 aa11.97□□□□□ -0.49
SPARC-204ENST00000521569 CCNL1Q9UK58 526 aaPredicted RBP11.97□□□□□ -0.49
SPARC-204ENST00000521569 LTN1O94822 1766 aa11.97□□□□□ -0.49
SPARC-204ENST00000521569 MEGF6O75095 1541 aa11.96□□□□□ -0.49
SPARC-204ENST00000521569 USP47Q96K76 1375 aa11.96□□□□□ -0.49
SPARC-204ENST00000521569 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
SPARC-204ENST00000521569 CDCA8Q53HL2 280 aa11.96□□□□□ -0.49
SPARC-204ENST00000521569 LTV1Q96GA3 475 aaPredicted RBP11.96□□□□□ -0.49
SPARC-204ENST00000521569 CD2APQ9Y5K6 639 aa11.96□□□□□ -0.49
SPARC-204ENST00000521569 TMF1P82094 1093 aa11.95□□□□□ -0.5
SPARC-204ENST00000521569 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
SPARC-204ENST00000521569 RAPGEF4Q8WZA2 1011 aa11.95□□□□□ -0.5
SPARC-204ENST00000521569 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
SPARC-204ENST00000521569 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
SPARC-204ENST00000521569 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
SPARC-204ENST00000521569 FLT4P35916 1363 aa11.94□□□□□ -0.5
SPARC-204ENST00000521569 PLEKHG2Q9H7P9 1386 aa11.94□□□□□ -0.5
SPARC-204ENST00000521569 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
SPARC-204ENST00000521569 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
SPARC-204ENST00000521569 FBLN1P23142 703 aa11.94□□□□□ -0.5
SPARC-204ENST00000521569 RRS1Q15050 365 aaKnown RBP11.94□□□□□ -0.5
SPARC-204ENST00000521569 TATP17735 454 aaPredicted RBP11.93□□□□□ -0.5
SPARC-204ENST00000521569 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
SPARC-204ENST00000521569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
SPARC-204ENST00000521569 LY75O60449 1722 aa11.92□□□□□ -0.5
SPARC-204ENST00000521569 CYP27B1O15528 508 aa11.92□□□□□ -0.5
SPARC-204ENST00000521569 KCNQ4P56696 695 aa11.92□□□□□ -0.5
SPARC-204ENST00000521569 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
SPARC-204ENST00000521569 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
SPARC-204ENST00000521569 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
SPARC-204ENST00000521569 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPARC-204ENST00000521569 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
SPARC-204ENST00000521569 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
SPARC-204ENST00000521569 CHD4Q14839 1912 aa11.91□□□□□ -0.5
SPARC-204ENST00000521569 GIGYF1O75420 1035 aaPredicted RBP11.9□□□□□ -0.5
SPARC-204ENST00000521569 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
SPARC-204ENST00000521569 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
SPARC-204ENST00000521569 WASHC2AQ641Q2 1341 aa11.89□□□□□ -0.51
SPARC-204ENST00000521569 SSFA2P28290 1259 aa11.89□□□□□ -0.51
SPARC-204ENST00000521569 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
SPARC-204ENST00000521569 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
SPARC-204ENST00000521569 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
SPARC-204ENST00000521569 USHBP1Q8N6Y0 703 aa11.88□□□□□ -0.51
SPARC-204ENST00000521569 PIGBQ92521 554 aa11.88□□□□□ -0.51
SPARC-204ENST00000521569 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
SPARC-204ENST00000521569 ADCY9O60503 1353 aa11.87□□□□□ -0.51
SPARC-204ENST00000521569 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
SPARC-204ENST00000521569 DOT1LQ8TEK3 1739 aa11.86□□□□□ -0.51
SPARC-204ENST00000521569 LOC102724428A0A0B4J2F2 783 aa11.85□□□□□ -0.51
SPARC-204ENST00000521569 MSH5O43196 834 aa11.85□□□□□ -0.51
SPARC-204ENST00000521569 SIK1P57059 783 aa11.85□□□□□ -0.51
SPARC-204ENST00000521569 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
SPARC-204ENST00000521569 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
SPARC-204ENST00000521569 KAT6BQ8WYB5 2073 aa11.85□□□□□ -0.51
SPARC-204ENST00000521569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
SPARC-204ENST00000521569 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
SPARC-204ENST00000521569 AK7Q96M32 723 aa11.84□□□□□ -0.51
SPARC-204ENST00000521569 EYA1Q99502 592 aa11.84□□□□□ -0.51
SPARC-204ENST00000521569 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.51
SPARC-204ENST00000521569 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
SPARC-204ENST00000521569 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
SPARC-204ENST00000521569 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
SPARC-204ENST00000521569 POLKQ9UBT6 870 aa11.83□□□□□ -0.52
SPARC-204ENST00000521569 PHKG2P15735 406 aa11.82□□□□□ -0.52
SPARC-204ENST00000521569 ADRA2BP18089 450 aa11.82□□□□□ -0.52
SPARC-204ENST00000521569 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
SPARC-204ENST00000521569 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
SPARC-204ENST00000521569 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
SPARC-204ENST00000521569 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
SPARC-204ENST00000521569 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
SPARC-204ENST00000521569 ERVV-2B6SEH9 535 aa11.81□□□□□ -0.52
SPARC-204ENST00000521569 TGFB2P61812 414 aa11.81□□□□□ -0.52
SPARC-204ENST00000521569 C5P01031 1676 aa11.81□□□□□ -0.52
SPARC-204ENST00000521569 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
SPARC-204ENST00000521569 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
SPARC-204ENST00000521569 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
SPARC-204ENST00000521569 GPBP1L1Q9HC44 474 aaPredicted RBP11.8□□□□□ -0.52
SPARC-204ENST00000521569 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
SPARC-204ENST00000521569 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
SPARC-204ENST00000521569 IGSF1Q8N6C5 1336 aa11.8□□□□□ -0.52
SPARC-204ENST00000521569 RGPD2P0DJD1 1756 aa11.79□□□□□ -0.52
SPARC-204ENST00000521569 ITPK1Q13572 414 aa11.79□□□□□ -0.52
SPARC-204ENST00000521569 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
SPARC-204ENST00000521569 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
SPARC-204ENST00000521569 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
SPARC-204ENST00000521569 KDRP35968 1356 aa11.79□□□□□ -0.52
SPARC-204ENST00000521569 ANKRD26Q9UPS8 1709 aa11.78□□□□□ -0.52
SPARC-204ENST00000521569 HSPA6P17066 643 aa11.78□□□□□ -0.52
SPARC-204ENST00000521569 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
SPARC-204ENST00000521569 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms