RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
PVT1-210ENST00000521122 CCDC7Q96M83 1385 aa13.36□□□□□ -0.27
PVT1-210ENST00000521122 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
PVT1-210ENST00000521122 QRICH2Q9H0J4 1663 aa13.36□□□□□ -0.27
PVT1-210ENST00000521122 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
PVT1-210ENST00000521122 VEGFBP49765 207 aa13.35□□□□□ -0.27
PVT1-210ENST00000521122 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
PVT1-210ENST00000521122 CCNL1Q9UK58 526 aaPredicted RBP13.35□□□□□ -0.27
PVT1-210ENST00000521122 KIAA1551Q9HCM1 1747 aa13.35□□□□□ -0.27
PVT1-210ENST00000521122 A0A0C4DFX4 3053 aa13.35□□□□□ -0.27
PVT1-210ENST00000521122 C14orf93Q9H972 538 aaKnown RBP13.34□□□□□ -0.27
PVT1-210ENST00000521122 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
PVT1-210ENST00000521122 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
PVT1-210ENST00000521122 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
PVT1-210ENST00000521122 KIF13BQ9NQT8 1826 aa13.32□□□□□ -0.28
PVT1-210ENST00000521122 DLL1O00548 723 aa13.32□□□□□ -0.28
PVT1-210ENST00000521122 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
PVT1-210ENST00000521122 TGFB2P61812 414 aa13.32□□□□□ -0.28
PVT1-210ENST00000521122 ACEP12821 1306 aa13.32□□□□□ -0.28
PVT1-210ENST00000521122 FCHSD2O94868 740 aa13.31□□□□□ -0.28
PVT1-210ENST00000521122 GCC1Q96CN9 775 aa13.31□□□□□ -0.28
PVT1-210ENST00000521122 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
PVT1-210ENST00000521122 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
PVT1-210ENST00000521122 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
PVT1-210ENST00000521122 MCOLN1Q9GZU1 580 aa13.3□□□□□ -0.28
PVT1-210ENST00000521122 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
PVT1-210ENST00000521122 SLIT3O75094 1523 aa13.29□□□□□ -0.28
PVT1-210ENST00000521122 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
PVT1-210ENST00000521122 SBF1O95248 1867 aa13.29□□□□□ -0.28
PVT1-210ENST00000521122 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
PVT1-210ENST00000521122 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
PVT1-210ENST00000521122 SPATA31E1Q6ZUB1 1445 aa13.29□□□□□ -0.28
PVT1-210ENST00000521122 RGPD5Q99666 1765 aa13.28□□□□□ -0.28
PVT1-210ENST00000521122 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
PVT1-210ENST00000521122 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
PVT1-210ENST00000521122 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
PVT1-210ENST00000521122 NSD2O96028 1365 aa13.26□□□□□ -0.29
PVT1-210ENST00000521122 C5P01031 1676 aa13.26□□□□□ -0.29
PVT1-210ENST00000521122 ERBB3P21860 1342 aa13.26□□□□□ -0.29
PVT1-210ENST00000521122 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
PVT1-210ENST00000521122 IL2RBP14784 551 aa13.25□□□□□ -0.29
PVT1-210ENST00000521122 HABP4Q5JVS0 413 aaKnown RBP13.25□□□□□ -0.29
PVT1-210ENST00000521122 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
PVT1-210ENST00000521122 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
PVT1-210ENST00000521122 ANKRD36BQ8N2N9 1353 aa13.24□□□□□ -0.29
PVT1-210ENST00000521122 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
PVT1-210ENST00000521122 DPEP1P16444 411 aa13.24□□□□□ -0.29
PVT1-210ENST00000521122 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
PVT1-210ENST00000521122 PRIM1P49642 420 aaKnown RBP13.24□□□□□ -0.29
PVT1-210ENST00000521122 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
PVT1-210ENST00000521122 DCAF5Q96JK2 942 aa13.24□□□□□ -0.29
PVT1-210ENST00000521122 POTECB2RU33 542 aa13.23□□□□□ -0.29
PVT1-210ENST00000521122 NLRP6P59044 892 aa13.23□□□□□ -0.29
PVT1-210ENST00000521122 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
PVT1-210ENST00000521122 PASKQ96RG2 1323 aa13.22□□□□□ -0.29
PVT1-210ENST00000521122 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
PVT1-210ENST00000521122 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
PVT1-210ENST00000521122 TAF1LQ8IZX4 1826 aa13.21□□□□□ -0.29
PVT1-210ENST00000521122 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
PVT1-210ENST00000521122 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
PVT1-210ENST00000521122 KDM6AO15550 1401 aaPredicted RBP13.21□□□□□ -0.3
PVT1-210ENST00000521122 USP47Q96K76 1375 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 DOT1LQ8TEK3 1739 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 MMP10P09238 476 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 KCNA3P22001 575 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 SOX10P56693 466 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 APLP2Q06481 763 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
PVT1-210ENST00000521122 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
PVT1-210ENST00000521122 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
PVT1-210ENST00000521122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
PVT1-210ENST00000521122 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
PVT1-210ENST00000521122 PHF14O94880 888 aa13.19□□□□□ -0.3
PVT1-210ENST00000521122 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
PVT1-210ENST00000521122 ADGRB1O14514 1584 aa13.19□□□□□ -0.3
PVT1-210ENST00000521122 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
PVT1-210ENST00000521122 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
PVT1-210ENST00000521122 AK7Q96M32 723 aa13.18□□□□□ -0.3
PVT1-210ENST00000521122 PIM2Q9P1W9 311 aa13.18□□□□□ -0.3
PVT1-210ENST00000521122 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
PVT1-210ENST00000521122 SZT2Q5T011 3432 aa13.17□□□□□ -0.3
PVT1-210ENST00000521122 DGKZQ13574 1117 aa13.17□□□□□ -0.3
PVT1-210ENST00000521122 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
PVT1-210ENST00000521122 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 SSFA2P28290 1259 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 THSD7BQ9C0I4 1608 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 CASP8AP2Q9UKL3 1982 aa13.16□□□□□ -0.3
PVT1-210ENST00000521122 LMNB1P20700 586 aa13.15□□□□□ -0.3
PVT1-210ENST00000521122 FXR1P51114 621 aaKnown RBP eCLIP13.15□□□□□ -0.3
PVT1-210ENST00000521122 KCNH5Q8NCM2 988 aa13.15□□□□□ -0.3
PVT1-210ENST00000521122 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
PVT1-210ENST00000521122 RASSF7Q02833 373 aa13.14□□□□□ -0.31
PVT1-210ENST00000521122 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
PVT1-210ENST00000521122 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
PVT1-210ENST00000521122 NBPF15Q8N660 670 aa13.13□□□□□ -0.31
PVT1-210ENST00000521122 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms