RNA–Protein interactions for RNA: ENST00000520411.1

AP003469.1-201, humanhuman

TSL 3

Gene AP003469.1, Length 498 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003469.1-201ENST00000520411 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 PATL2C9JE40 543 aaKnown RBP6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 SKOR1P84550 965 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 RASSF7Q02833 373 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 AGERQ15109 404 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 RC3H1Q5TC82 1133 aaKnown RBP6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 TRMT44Q8IYL2 757 aaKnown RBP6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 FOXJ1Q92949 421 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 SLC10A4Q96EP9 437 aa6.68□□□□□ -1.34
AP003469.1-201ENST00000520411 ATP5J2-PTCD1G3V325 749 aa6.67□□□□□ -1.34
AP003469.1-201ENST00000520411 ALDH1A1P00352 501 aa6.67□□□□□ -1.34
AP003469.1-201ENST00000520411 NBPF20Q3BBV1 942 aa6.67□□□□□ -1.34
AP003469.1-201ENST00000520411 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
AP003469.1-201ENST00000520411 RNF20Q5VTR2 975 aa6.67□□□□□ -1.34
AP003469.1-201ENST00000520411 TMEM88BA6NKF7 163 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 BRD1O95696 1058 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 WNT7BP56706 349 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 SH3BP2P78314 561 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 NCOA4Q13772 614 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 EML3Q32P44 896 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 CDCA8Q53HL2 280 aa6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 MKRN1Q9UHC7 482 aaKnown RBP6.66□□□□□ -1.34
AP003469.1-201ENST00000520411 ESPNB1AK53 854 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L15C9J2P7 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L10C9JJH3 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L13C9JLJ4 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L12C9JPN9 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L11C9JVI0 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L21D6R901 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L18D6R9N7 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L22D6RA61 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L17D6RBQ6 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L19D6RCP7 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L20D6RJB6 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 CAPN5O15484 640 aaPredicted RBP6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 VSIG8P0DPA2 414 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 KCNA1Q09470 495 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 USP17L24Q0WX57 530 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 AEBP1Q8IUX7 1158 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 SEPT12Q8IYM1 358 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 DEPDC4Q8N2C3 294 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 ZFP42Q96MM3 310 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 ZMIZ1Q9ULJ6 1067 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 DOLKQ9UPQ8 538 aa6.65□□□□□ -1.34
AP003469.1-201ENST00000520411 VARSP26640 1264 aaKnown RBP6.64□□□□□ -1.35
AP003469.1-201ENST00000520411 B4GALNT3Q6L9W6 998 aa6.64□□□□□ -1.35
AP003469.1-201ENST00000520411 LARP1Q6PKG0 1096 aaKnown RBP6.64□□□□□ -1.35
AP003469.1-201ENST00000520411 TRIM50Q86XT4 487 aa6.64□□□□□ -1.35
AP003469.1-201ENST00000520411 NOVA2Q9UNW9 492 aaKnown RBP6.64□□□□□ -1.35
AP003469.1-201ENST00000520411 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
AP003469.1-201ENST00000520411 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 ATP1A2P50993 1020 aa6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 PTK7Q13308 1070 aa6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 NOD1Q9Y239 953 aa6.63□□□□□ -1.35
AP003469.1-201ENST00000520411 RASA1P20936 1047 aa6.62□□□□□ -1.35
AP003469.1-201ENST00000520411 CRTC2Q53ET0 693 aaPredicted RBP6.62□□□□□ -1.35
AP003469.1-201ENST00000520411 TMEM164Q5U3C3 297 aa6.62□□□□□ -1.35
AP003469.1-201ENST00000520411 SIRT1Q96EB6 747 aa6.62□□□□□ -1.35
AP003469.1-201ENST00000520411 OGFOD1Q8N543 542 aa6.61□□□□□ -1.35
AP003469.1-201ENST00000520411 STK32AQ8WU08 396 aa6.61□□□□□ -1.35
AP003469.1-201ENST00000520411 CDCA7Q9BWT1 371 aaPredicted RBP6.61□□□□□ -1.35
AP003469.1-201ENST00000520411 SIAH2O43255 324 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 TSGA10IPQ3SY00 556 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 OXLD1Q5BKU9 147 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 SIX5Q8N196 739 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 LARGE2Q8N3Y3 721 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 FAM200AQ8TCP9 573 aa6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 KCTD15Q96SI1 283 aaPredicted RBP6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 DNAAF2Q9NVR5 837 aaKnown RBP6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 CCDC9Q9Y3X0 531 aaKnown RBP6.6□□□□□ -1.35
AP003469.1-201ENST00000520411 GTF2IP78347 998 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 CLDN10P78369 228 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 USP4Q13107 963 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 SWI5Q1ZZU3 235 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 MPNDQ8N594 471 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 TRIM52Q96A61 297 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 CDK15Q96Q40 435 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
AP003469.1-201ENST00000520411 CARNS1A5YM72 827 aa6.58□□□□□ -1.36
AP003469.1-201ENST00000520411 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
AP003469.1-201ENST00000520411 VASH1Q7L8A9 365 aaPredicted RBP6.58□□□□□ -1.36
AP003469.1-201ENST00000520411 ADAMTS8Q9UP79 889 aa6.58□□□□□ -1.36
AP003469.1-201ENST00000520411 DPYDQ12882 1025 aa6.57□□□□□ -1.36
AP003469.1-201ENST00000520411 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
AP003469.1-201ENST00000520411 ZNF594Q96JF6 807 aaPredicted RBP6.57□□□□□ -1.36
AP003469.1-201ENST00000520411 RBM19Q9Y4C8 960 aaKnown RBP6.57□□□□□ -1.36
AP003469.1-201ENST00000520411 WASF2Q9Y6W5 498 aa6.57□□□□□ -1.36
AP003469.1-201ENST00000520411 ZBTB7BO15156 539 aaPredicted RBP6.56□□□□□ -1.36
AP003469.1-201ENST00000520411 DKK1O94907 266 aa6.56□□□□□ -1.36
AP003469.1-201ENST00000520411 MYCP01106 439 aaPredicted RBP6.56□□□□□ -1.36
AP003469.1-201ENST00000520411 FAM69CQ0P6D2 419 aa6.56□□□□□ -1.36
AP003469.1-201ENST00000520411 GNEQ9Y223 722 aaKnown RBP6.56□□□□□ -1.36
AP003469.1-201ENST00000520411 PCDHGA11Q9Y5H2 935 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms