RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CDCA7Q9BWT1 371 aaPredicted RBP18.75■□□□□ 0.59
SDC2-203ENST00000519587 USP35Q9P2H5 1018 aa18.75■□□□□ 0.59
SDC2-203ENST00000519587 ADAMTS8Q9UP79 889 aa18.75■□□□□ 0.59
SDC2-203ENST00000519587 GLI3P10071 1580 aa18.74■□□□□ 0.59
SDC2-203ENST00000519587 TATP17735 454 aaPredicted RBP18.74■□□□□ 0.59
SDC2-203ENST00000519587 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
SDC2-203ENST00000519587 MEGF6O75095 1541 aa18.74■□□□□ 0.59
SDC2-203ENST00000519587 IL2RBP14784 551 aa18.73■□□□□ 0.59
SDC2-203ENST00000519587 PRKAR2BP31323 418 aa18.73■□□□□ 0.59
SDC2-203ENST00000519587 OVOS2A0A0G2JMS6 1433 aa18.73■□□□□ 0.59
SDC2-203ENST00000519587 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
SDC2-203ENST00000519587 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
SDC2-203ENST00000519587 DISP2A7MBM2 1401 aa18.72■□□□□ 0.59
SDC2-203ENST00000519587 LRRC37A3O60309 1634 aa18.71■□□□□ 0.59
SDC2-203ENST00000519587 THSD7AQ9UPZ6 1657 aa18.71■□□□□ 0.59
SDC2-203ENST00000519587 GJD4Q96KN9 370 aaPredicted RBP18.71■□□□□ 0.59
SDC2-203ENST00000519587 TNS2Q63HR2 1409 aa18.69■□□□□ 0.58
SDC2-203ENST00000519587 AMOTQ4VCS5 1084 aa18.69■□□□□ 0.58
SDC2-203ENST00000519587 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
SDC2-203ENST00000519587 SPG7Q9UQ90 795 aa18.69■□□□□ 0.58
SDC2-203ENST00000519587 CCDC146Q8IYE0 955 aa18.68■□□□□ 0.58
SDC2-203ENST00000519587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
SDC2-203ENST00000519587 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
SDC2-203ENST00000519587 A0A0G2JS52 829 aa18.67■□□□□ 0.58
SDC2-203ENST00000519587 MYT1Q01538 1121 aa18.67■□□□□ 0.58
SDC2-203ENST00000519587 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
SDC2-203ENST00000519587 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
SDC2-203ENST00000519587 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
SDC2-203ENST00000519587 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
SDC2-203ENST00000519587 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
SDC2-203ENST00000519587 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
SDC2-203ENST00000519587 C1orf141Q5JVX7 400 aa18.64■□□□□ 0.57
SDC2-203ENST00000519587 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
SDC2-203ENST00000519587 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.57
SDC2-203ENST00000519587 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
SDC2-203ENST00000519587 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
SDC2-203ENST00000519587 DDB1Q16531 1140 aa18.63■□□□□ 0.57
SDC2-203ENST00000519587 ZNF530Q6P9A1 599 aaPredicted RBP18.63■□□□□ 0.57
SDC2-203ENST00000519587 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
SDC2-203ENST00000519587 EXOC5O00471 708 aa18.62■□□□□ 0.57
SDC2-203ENST00000519587 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
SDC2-203ENST00000519587 MAP3K5Q99683 1374 aa18.62■□□□□ 0.57
SDC2-203ENST00000519587 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
SDC2-203ENST00000519587 BRWD3Q6RI45 1802 aa18.62■□□□□ 0.57
SDC2-203ENST00000519587 APAF1O14727 1248 aa18.61■□□□□ 0.57
SDC2-203ENST00000519587 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
SDC2-203ENST00000519587 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
SDC2-203ENST00000519587 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
SDC2-203ENST00000519587 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
SDC2-203ENST00000519587 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
SDC2-203ENST00000519587 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
SDC2-203ENST00000519587 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
SDC2-203ENST00000519587 IFNL2Q8IZJ0 200 aa18.59■□□□□ 0.57
SDC2-203ENST00000519587 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.57
SDC2-203ENST00000519587 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
SDC2-203ENST00000519587 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.56
SDC2-203ENST00000519587 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
SDC2-203ENST00000519587 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
SDC2-203ENST00000519587 GNAT3A8MTJ3 354 aa18.57■□□□□ 0.56
SDC2-203ENST00000519587 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
SDC2-203ENST00000519587 RIPK4P57078 832 aa18.57■□□□□ 0.56
SDC2-203ENST00000519587 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
SDC2-203ENST00000519587 PHKG2P15735 406 aa18.56■□□□□ 0.56
SDC2-203ENST00000519587 NEUROD2Q15784 382 aa18.56■□□□□ 0.56
SDC2-203ENST00000519587 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
SDC2-203ENST00000519587 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
SDC2-203ENST00000519587 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
SDC2-203ENST00000519587 CYP27B1O15528 508 aa18.55■□□□□ 0.56
SDC2-203ENST00000519587 PSDA5PKW4 1024 aaPredicted RBP18.54■□□□□ 0.56
SDC2-203ENST00000519587 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
SDC2-203ENST00000519587 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
SDC2-203ENST00000519587 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
SDC2-203ENST00000519587 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
SDC2-203ENST00000519587 NKX1-1Q15270 411 aaPredicted RBP18.52■□□□□ 0.56
SDC2-203ENST00000519587 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
SDC2-203ENST00000519587 MRC1P22897 1456 aa18.52■□□□□ 0.55
SDC2-203ENST00000519587 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
SDC2-203ENST00000519587 KAT6BQ8WYB5 2073 aa18.51■□□□□ 0.55
SDC2-203ENST00000519587 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
SDC2-203ENST00000519587 BCL9O00512 1426 aa18.5■□□□□ 0.55
SDC2-203ENST00000519587 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
SDC2-203ENST00000519587 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
SDC2-203ENST00000519587 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
SDC2-203ENST00000519587 ITGB4P16144 1822 aa18.49■□□□□ 0.55
SDC2-203ENST00000519587 TEFQ10587 303 aa18.49■□□□□ 0.55
SDC2-203ENST00000519587 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
SDC2-203ENST00000519587 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
SDC2-203ENST00000519587 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
SDC2-203ENST00000519587 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
SDC2-203ENST00000519587 NHSQ6T4R5 1651 aa18.49■□□□□ 0.55
SDC2-203ENST00000519587 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
SDC2-203ENST00000519587 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
SDC2-203ENST00000519587 MCM10Q7L590 875 aa18.48■□□□□ 0.55
SDC2-203ENST00000519587 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
SDC2-203ENST00000519587 SBF2Q86WG5 1849 aa18.47■□□□□ 0.55
SDC2-203ENST00000519587 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
SDC2-203ENST00000519587 BAG6P46379 1132 aa18.46■□□□□ 0.55
SDC2-203ENST00000519587 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
SDC2-203ENST00000519587 IL16Q14005 1332 aa18.46■□□□□ 0.55
SDC2-203ENST00000519587 CABP4P57796 275 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms