RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 GPR153Q6NV75 609 aa13.68□□□□□ -0.22
MSR1-210ENST00000519060 NUDT16Q96DE0 195 aaKnown RBP13.68□□□□□ -0.22
MSR1-210ENST00000519060 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
MSR1-210ENST00000519060 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
MSR1-210ENST00000519060 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
MSR1-210ENST00000519060 STAC3Q96MF2 364 aa13.67□□□□□ -0.22
MSR1-210ENST00000519060 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
MSR1-210ENST00000519060 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
MSR1-210ENST00000519060 DPYSL4O14531 572 aa13.66□□□□□ -0.22
MSR1-210ENST00000519060 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
MSR1-210ENST00000519060 ARSIQ5FYB1 569 aa13.66□□□□□ -0.22
MSR1-210ENST00000519060 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
MSR1-210ENST00000519060 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
MSR1-210ENST00000519060 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
MSR1-210ENST00000519060 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.22
MSR1-210ENST00000519060 CDK19Q9BWU1 502 aa13.65□□□□□ -0.22
MSR1-210ENST00000519060 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
MSR1-210ENST00000519060 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
MSR1-210ENST00000519060 ST18O60284 1047 aa13.64□□□□□ -0.23
MSR1-210ENST00000519060 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
MSR1-210ENST00000519060 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
MSR1-210ENST00000519060 STRN4Q9NRL3 753 aa13.64□□□□□ -0.23
MSR1-210ENST00000519060 KIAA0232Q92628 1395 aa13.63□□□□□ -0.23
MSR1-210ENST00000519060 TRIM37O94972 964 aa13.63□□□□□ -0.23
MSR1-210ENST00000519060 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
MSR1-210ENST00000519060 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
MSR1-210ENST00000519060 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
MSR1-210ENST00000519060 TRPM3Q9HCF6 1732 aaPredicted RBP13.63□□□□□ -0.23
MSR1-210ENST00000519060 ADGRB2O60241 1585 aa13.62□□□□□ -0.23
MSR1-210ENST00000519060 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
MSR1-210ENST00000519060 EVA1CP58658 441 aa13.62□□□□□ -0.23
MSR1-210ENST00000519060 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
MSR1-210ENST00000519060 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
MSR1-210ENST00000519060 COL14A1Q05707 1796 aaKnown RBP13.61□□□□□ -0.23
MSR1-210ENST00000519060 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
MSR1-210ENST00000519060 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
MSR1-210ENST00000519060 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
MSR1-210ENST00000519060 ACEP12821 1306 aa13.61□□□□□ -0.23
MSR1-210ENST00000519060 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
MSR1-210ENST00000519060 APBA3O96018 575 aa13.6□□□□□ -0.23
MSR1-210ENST00000519060 SPDYE16A6NNV3 312 aaPredicted RBP13.59□□□□□ -0.23
MSR1-210ENST00000519060 EVI5O60447 810 aa13.59□□□□□ -0.23
MSR1-210ENST00000519060 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
MSR1-210ENST00000519060 NUDT7P0C024 238 aa13.58□□□□□ -0.24
MSR1-210ENST00000519060 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
MSR1-210ENST00000519060 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
MSR1-210ENST00000519060 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
MSR1-210ENST00000519060 DISP2A7MBM2 1401 aa13.57□□□□□ -0.24
MSR1-210ENST00000519060 PDIA6Q15084 440 aa13.57□□□□□ -0.24
MSR1-210ENST00000519060 NBPF1Q3BBV0 1214 aa13.57□□□□□ -0.24
MSR1-210ENST00000519060 LCE2DQ5TA82 110 aaPredicted RBP13.57□□□□□ -0.24
MSR1-210ENST00000519060 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
MSR1-210ENST00000519060 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
MSR1-210ENST00000519060 LRP5O75197 1615 aa13.57□□□□□ -0.24
MSR1-210ENST00000519060 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
MSR1-210ENST00000519060 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
MSR1-210ENST00000519060 ATP7BP35670 1465 aa13.55□□□□□ -0.24
MSR1-210ENST00000519060 GCP02774 474 aa13.55□□□□□ -0.24
MSR1-210ENST00000519060 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
MSR1-210ENST00000519060 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
MSR1-210ENST00000519060 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
MSR1-210ENST00000519060 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
MSR1-210ENST00000519060 CRYBG1Q9Y4K1 1723 aa13.53□□□□□ -0.24
MSR1-210ENST00000519060 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
MSR1-210ENST00000519060 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
MSR1-210ENST00000519060 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.25
MSR1-210ENST00000519060 USP19O94966 1318 aa13.52□□□□□ -0.25
MSR1-210ENST00000519060 CPDO75976 1380 aa13.52□□□□□ -0.25
MSR1-210ENST00000519060 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
MSR1-210ENST00000519060 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
MSR1-210ENST00000519060 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
MSR1-210ENST00000519060 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
MSR1-210ENST00000519060 ZBTB7CA1YPR0 619 aa13.49□□□□□ -0.25
MSR1-210ENST00000519060 PTGER2P43116 358 aa13.49□□□□□ -0.25
MSR1-210ENST00000519060 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
MSR1-210ENST00000519060 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
MSR1-210ENST00000519060 TNS1Q9HBL0 1735 aaKnown RBP13.48□□□□□ -0.25
MSR1-210ENST00000519060 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
MSR1-210ENST00000519060 EMP3P54852 163 aa13.48□□□□□ -0.25
MSR1-210ENST00000519060 SEMA3EO15041 775 aa13.47□□□□□ -0.25
MSR1-210ENST00000519060 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
MSR1-210ENST00000519060 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
MSR1-210ENST00000519060 PLSCR1O15162 318 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 KCNQ2O43526 872 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 NBR1Q14596 966 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 ITSN1Q15811 1721 aa13.46□□□□□ -0.25
MSR1-210ENST00000519060 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
MSR1-210ENST00000519060 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
MSR1-210ENST00000519060 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
MSR1-210ENST00000519060 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
MSR1-210ENST00000519060 ERBB3P21860 1342 aa13.44□□□□□ -0.26
MSR1-210ENST00000519060 COL5A2P05997 1499 aaPredicted RBP13.44□□□□□ -0.26
MSR1-210ENST00000519060 DDB1Q16531 1140 aa13.44□□□□□ -0.26
MSR1-210ENST00000519060 YY1P25490 414 aa13.43□□□□□ -0.26
MSR1-210ENST00000519060 CRB1P82279 1406 aa13.43□□□□□ -0.26
MSR1-210ENST00000519060 NRKQ7Z2Y5 1582 aa13.43□□□□□ -0.26
MSR1-210ENST00000519060 MARCH10Q8NA82 808 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms