RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 INSRP06213 1382 aa10.37□□□□□ -0.75
CSGALNACT1-206ENST00000518542 ERBB3P21860 1342 aa10.36□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CRB1P82279 1406 aa10.36□□□□□ -0.75
CSGALNACT1-206ENST00000518542 HSP90AB2PQ58FF8 381 aa10.36□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
CSGALNACT1-206ENST00000518542 NLRP2Q9NX02 1062 aa10.36□□□□□ -0.75
CSGALNACT1-206ENST00000518542 PARD3Q8TEW0 1356 aa10.36□□□□□ -0.75
CSGALNACT1-206ENST00000518542 SPATA31A5Q5VU36 1347 aa10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 SPATA31A7Q8IWB4 1347 aa10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 PPP2R1AP30153 589 aa10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CFAP53Q96M91 514 aa10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 THRAP3Q9Y2W1 955 aaKnown RBP10.35□□□□□ -0.75
CSGALNACT1-206ENST00000518542 SPATA31A1Q5TZJ5 1347 aa10.34□□□□□ -0.75
CSGALNACT1-206ENST00000518542 RGPD2P0DJD1 1756 aa10.34□□□□□ -0.75
CSGALNACT1-206ENST00000518542 ANP32CO43423 234 aa10.34□□□□□ -0.75
CSGALNACT1-206ENST00000518542 TCP11L2Q8N4U5 519 aa10.34□□□□□ -0.75
CSGALNACT1-206ENST00000518542 CARD10Q9BWT7 1032 aa10.34□□□□□ -0.75
CSGALNACT1-206ENST00000518542 A0A0G2JS52 829 aa10.33□□□□□ -0.76
CSGALNACT1-206ENST00000518542 MYT1Q01538 1121 aa10.33□□□□□ -0.76
CSGALNACT1-206ENST00000518542 DEFB132Q7Z7B7 95 aa10.33□□□□□ -0.76
CSGALNACT1-206ENST00000518542 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
CSGALNACT1-206ENST00000518542 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
CSGALNACT1-206ENST00000518542 MYBBP1AQ9BQG0 1328 aaKnown RBP10.33□□□□□ -0.76
CSGALNACT1-206ENST00000518542 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-206ENST00000518542 EIF4A2Q14240 407 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-206ENST00000518542 FAM98CQ17RN3 349 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-206ENST00000518542 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
CSGALNACT1-206ENST00000518542 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
CSGALNACT1-206ENST00000518542 ONECUT3O60422 494 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-206ENST00000518542 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
CSGALNACT1-206ENST00000518542 NBPF6Q5VWK0 638 aa10.31□□□□□ -0.76
CSGALNACT1-206ENST00000518542 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
CSGALNACT1-206ENST00000518542 NBPF4Q96M43 638 aa10.31□□□□□ -0.76
CSGALNACT1-206ENST00000518542 WNK3Q9BYP7 1800 aa10.3□□□□□ -0.76
CSGALNACT1-206ENST00000518542 IL2RBP14784 551 aa10.3□□□□□ -0.76
CSGALNACT1-206ENST00000518542 NUDCQ9Y266 331 aa10.3□□□□□ -0.76
CSGALNACT1-206ENST00000518542 IL13P35225 146 aa10.29□□□□□ -0.76
CSGALNACT1-206ENST00000518542 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
CSGALNACT1-206ENST00000518542 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
CSGALNACT1-206ENST00000518542 RAPGEF4Q8WZA2 1011 aa10.29□□□□□ -0.76
CSGALNACT1-206ENST00000518542 EYA1Q99502 592 aa10.29□□□□□ -0.76
CSGALNACT1-206ENST00000518542 THSD7AQ9UPZ6 1657 aa10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 PARP4Q9UKK3 1724 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 PRKAR2AP13861 404 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 PIP4P2Q8N4L2 257 aa10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 ZBTB47Q9UFB7 747 aaPredicted RBP10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
CSGALNACT1-206ENST00000518542 EXOC5O00471 708 aa10.27□□□□□ -0.77
CSGALNACT1-206ENST00000518542 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PDE3BQ13370 1112 aa10.27□□□□□ -0.77
CSGALNACT1-206ENST00000518542 DDB1Q16531 1140 aa10.27□□□□□ -0.77
CSGALNACT1-206ENST00000518542 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-206ENST00000518542 RGPD1P0DJD0 1748 aa10.27□□□□□ -0.77
CSGALNACT1-206ENST00000518542 DISP2A7MBM2 1401 aa10.26□□□□□ -0.77
CSGALNACT1-206ENST00000518542 NCAPD2Q15021 1401 aa10.26□□□□□ -0.77
CSGALNACT1-206ENST00000518542 SULT6B1Q6IMI4 303 aa10.26□□□□□ -0.77
CSGALNACT1-206ENST00000518542 KRT27Q7Z3Y8 459 aa10.26□□□□□ -0.77
CSGALNACT1-206ENST00000518542 TNS1Q9HBL0 1735 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
CSGALNACT1-206ENST00000518542 U2AF1L5P0DN76 240 aaPredicted RBP10.25□□□□□ -0.77
CSGALNACT1-206ENST00000518542 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
CSGALNACT1-206ENST00000518542 U2AF1Q01081 240 aaKnown RBP eCLIP10.25□□□□□ -0.77
CSGALNACT1-206ENST00000518542 ZCRB1Q8TBF4 217 aaKnown RBP10.25□□□□□ -0.77
CSGALNACT1-206ENST00000518542 LRRC37A3O60309 1634 aa10.25□□□□□ -0.77
CSGALNACT1-206ENST00000518542 HMOX1P09601 288 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 KDRP35968 1356 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PLEKHG2Q9H7P9 1386 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
CSGALNACT1-206ENST00000518542 MEGF6O75095 1541 aa10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 FCHSD2O94868 740 aa10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 NEFMP07197 916 aa10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 WDR43Q15061 677 aaKnown RBP eCLIP10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PLEKHO1Q53GL0 409 aaPredicted RBP10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.77
CSGALNACT1-206ENST00000518542 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PKD1L3Q7Z443 1732 aa10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 SF3B2Q13435 895 aaKnown RBP10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 AMOTQ4VCS5 1084 aa10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 DDX54Q8TDD1 881 aaKnown RBP10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 MRS2Q9HD23 443 aa10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PCDH11XQ9BZA7 1347 aa10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PCDH11YQ9BZA8 1340 aa10.22□□□□□ -0.77
CSGALNACT1-206ENST00000518542 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.77
CSGALNACT1-206ENST00000518542 PRKAR2BP31323 418 aa10.2□□□□□ -0.78
CSGALNACT1-206ENST00000518542 C1orf141Q5JVX7 400 aa10.2□□□□□ -0.78
CSGALNACT1-206ENST00000518542 IFNL2Q8IZJ0 200 aa10.2□□□□□ -0.78
CSGALNACT1-206ENST00000518542 MARCH10Q8NA82 808 aaPredicted RBP10.2□□□□□ -0.78
CSGALNACT1-206ENST00000518542 SHANK3Q9BYB0 1731 aa10.2□□□□□ -0.78
CSGALNACT1-206ENST00000518542 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
CSGALNACT1-206ENST00000518542 BAG6P46379 1132 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms