RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 ITGB4P16144 1822 aa16.86■□□□□ 0.29
IGHV3-6-201ENST00000518407 NHSQ6T4R5 1651 aa16.85■□□□□ 0.29
IGHV3-6-201ENST00000518407 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
IGHV3-6-201ENST00000518407 CCDC184Q52MB2 194 aa16.85■□□□□ 0.29
IGHV3-6-201ENST00000518407 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
IGHV3-6-201ENST00000518407 A0A0G2JS52 829 aa16.84■□□□□ 0.29
IGHV3-6-201ENST00000518407 MYT1Q01538 1121 aa16.84■□□□□ 0.29
IGHV3-6-201ENST00000518407 DDB1Q16531 1140 aa16.84■□□□□ 0.29
IGHV3-6-201ENST00000518407 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
IGHV3-6-201ENST00000518407 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
IGHV3-6-201ENST00000518407 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
IGHV3-6-201ENST00000518407 HMOX1P09601 288 aa16.83■□□□□ 0.28
IGHV3-6-201ENST00000518407 TATP17735 454 aaPredicted RBP16.83■□□□□ 0.28
IGHV3-6-201ENST00000518407 KRT27Q7Z3Y8 459 aa16.83■□□□□ 0.28
IGHV3-6-201ENST00000518407 KAT6BQ8WYB5 2073 aa16.83■□□□□ 0.28
IGHV3-6-201ENST00000518407 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
IGHV3-6-201ENST00000518407 BCL9O00512 1426 aa16.82■□□□□ 0.28
IGHV3-6-201ENST00000518407 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
IGHV3-6-201ENST00000518407 BTAF1O14981 1849 aa16.8■□□□□ 0.28
IGHV3-6-201ENST00000518407 SIPA1L3O60292 1781 aaPredicted RBP16.8■□□□□ 0.28
IGHV3-6-201ENST00000518407 EXOC5O00471 708 aa16.8■□□□□ 0.28
IGHV3-6-201ENST00000518407 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
IGHV3-6-201ENST00000518407 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
IGHV3-6-201ENST00000518407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
IGHV3-6-201ENST00000518407 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-6-201ENST00000518407 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
IGHV3-6-201ENST00000518407 PCDH11XQ9BZA7 1347 aa16.78■□□□□ 0.28
IGHV3-6-201ENST00000518407 PCDH11YQ9BZA8 1340 aa16.78■□□□□ 0.28
IGHV3-6-201ENST00000518407 RGPD3A6NKT7 1758 aaPredicted RBP16.78■□□□□ 0.28
IGHV3-6-201ENST00000518407 RGPD4Q7Z3J3 1758 aa16.78■□□□□ 0.28
IGHV3-6-201ENST00000518407 CYP27B1O15528 508 aa16.77■□□□□ 0.28
IGHV3-6-201ENST00000518407 FCHSD2O94868 740 aa16.77■□□□□ 0.28
IGHV3-6-201ENST00000518407 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
IGHV3-6-201ENST00000518407 PDE3BQ13370 1112 aa16.77■□□□□ 0.28
IGHV3-6-201ENST00000518407 FAM182BQ5T319 152 aa16.77■□□□□ 0.28
IGHV3-6-201ENST00000518407 PLEKHF1Q96S99 279 aa16.76■□□□□ 0.27
IGHV3-6-201ENST00000518407 MRS2Q9HD23 443 aa16.76■□□□□ 0.27
IGHV3-6-201ENST00000518407 SPG7Q9UQ90 795 aa16.76■□□□□ 0.27
IGHV3-6-201ENST00000518407 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
IGHV3-6-201ENST00000518407 KDM6AO15550 1401 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-6-201ENST00000518407 PHKG2P15735 406 aa16.74■□□□□ 0.27
IGHV3-6-201ENST00000518407 PLEKHO1Q53GL0 409 aaPredicted RBP16.74■□□□□ 0.27
IGHV3-6-201ENST00000518407 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
IGHV3-6-201ENST00000518407 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
IGHV3-6-201ENST00000518407 PAPPAQ13219 1627 aa16.74■□□□□ 0.27
IGHV3-6-201ENST00000518407 MRC1P22897 1456 aa16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 LY75O60449 1722 aa16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
IGHV3-6-201ENST00000518407 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-6-201ENST00000518407 MIER1Q8N108 512 aa16.72■□□□□ 0.27
IGHV3-6-201ENST00000518407 RREB1Q92766 1687 aa16.72■□□□□ 0.27
IGHV3-6-201ENST00000518407 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
IGHV3-6-201ENST00000518407 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
IGHV3-6-201ENST00000518407 MAP3K5Q99683 1374 aa16.69■□□□□ 0.26
IGHV3-6-201ENST00000518407 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
IGHV3-6-201ENST00000518407 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
IGHV3-6-201ENST00000518407 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
IGHV3-6-201ENST00000518407 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
IGHV3-6-201ENST00000518407 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
IGHV3-6-201ENST00000518407 KDM3BQ7LBC6 1761 aa16.67■□□□□ 0.26
IGHV3-6-201ENST00000518407 C1orf141Q5JVX7 400 aa16.67■□□□□ 0.26
IGHV3-6-201ENST00000518407 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
IGHV3-6-201ENST00000518407 NUP188Q5SRE5 1749 aa16.67■□□□□ 0.26
IGHV3-6-201ENST00000518407 HSP90AB1P08238 724 aaKnown RBP16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 MAPK8IP3Q9UPT6 1336 aa16.66■□□□□ 0.26
IGHV3-6-201ENST00000518407 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
IGHV3-6-201ENST00000518407 CEMIPQ8WUJ3 1361 aa16.65■□□□□ 0.26
IGHV3-6-201ENST00000518407 KCNQ2O43526 872 aa16.65■□□□□ 0.26
IGHV3-6-201ENST00000518407 TRIM37O94972 964 aa16.65■□□□□ 0.26
IGHV3-6-201ENST00000518407 NFE2L2Q16236 605 aa16.65■□□□□ 0.26
IGHV3-6-201ENST00000518407 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
IGHV3-6-201ENST00000518407 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
IGHV3-6-201ENST00000518407 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
IGHV3-6-201ENST00000518407 RNMTO43148 476 aaKnown RBP16.63■□□□□ 0.25
IGHV3-6-201ENST00000518407 NEFMP07197 916 aa16.63■□□□□ 0.25
IGHV3-6-201ENST00000518407 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
IGHV3-6-201ENST00000518407 LGR6Q9HBX8 967 aa16.63■□□□□ 0.25
IGHV3-6-201ENST00000518407 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
IGHV3-6-201ENST00000518407 ERVV-2B6SEH9 535 aa16.62■□□□□ 0.25
IGHV3-6-201ENST00000518407 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
IGHV3-6-201ENST00000518407 C5P01031 1676 aa16.62■□□□□ 0.25
IGHV3-6-201ENST00000518407 TJP1Q07157 1748 aa16.62■□□□□ 0.25
IGHV3-6-201ENST00000518407 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
IGHV3-6-201ENST00000518407 FAM9BQ8IZU0 186 aa16.61■□□□□ 0.25
IGHV3-6-201ENST00000518407 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
IGHV3-6-201ENST00000518407 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
IGHV3-6-201ENST00000518407 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
IGHV3-6-201ENST00000518407 SOCS7O14512 581 aa16.59■□□□□ 0.25
IGHV3-6-201ENST00000518407 APAF1O14727 1248 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms