RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
CDH12-204ENST00000518209 SNRKQ9NRH2 765 aa7.55□□□□□ -1.2
CDH12-204ENST00000518209 PTSQ03393 145 aa7.54□□□□□ -1.2
CDH12-204ENST00000518209 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
CDH12-204ENST00000518209 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
CDH12-204ENST00000518209 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
CDH12-204ENST00000518209 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
CDH12-204ENST00000518209 NDUFB9Q9Y6M9 179 aa7.54□□□□□ -1.2
CDH12-204ENST00000518209 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
CDH12-204ENST00000518209 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
CDH12-204ENST00000518209 BEND7Q8N7W2 519 aaPredicted RBP7.52□□□□□ -1.21
CDH12-204ENST00000518209 KRTAP4-12Q9BQ66 201 aa7.52□□□□□ -1.21
CDH12-204ENST00000518209 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
CDH12-204ENST00000518209 SUPT5HO00267 1087 aaKnown RBP7.51□□□□□ -1.21
CDH12-204ENST00000518209 ADAMTS2O95450 1211 aa7.51□□□□□ -1.21
CDH12-204ENST00000518209 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
CDH12-204ENST00000518209 LYPD4Q6UWN0 246 aa7.51□□□□□ -1.21
CDH12-204ENST00000518209 MEIOBQ8N635 442 aa7.51□□□□□ -1.21
CDH12-204ENST00000518209 ZNF592Q92610 1267 aa7.51□□□□□ -1.21
CDH12-204ENST00000518209 ZNF330Q9Y3S2 320 aaPredicted RBP7.51□□□□□ -1.21
CDH12-204ENST00000518209 FBXO45P0C2W1 286 aa7.5□□□□□ -1.21
CDH12-204ENST00000518209 MCCD1P59942 119 aaPredicted RBP7.5□□□□□ -1.21
CDH12-204ENST00000518209 NR1H3Q13133 447 aa7.5□□□□□ -1.21
CDH12-204ENST00000518209 INTS6LQ5JSJ4 861 aaKnown RBP7.5□□□□□ -1.21
CDH12-204ENST00000518209 SV2AQ7L0J3 742 aa7.5□□□□□ -1.21
CDH12-204ENST00000518209 PODNQ7Z5L7 613 aa7.5□□□□□ -1.21
CDH12-204ENST00000518209 CCDC155Q8N6L0 562 aa7.5□□□□□ -1.21
CDH12-204ENST00000518209 BAG6P46379 1132 aa7.49□□□□□ -1.21
CDH12-204ENST00000518209 TRIM52Q96A61 297 aa7.49□□□□□ -1.21
CDH12-204ENST00000518209 PCDHB9Q9Y5E1 797 aa7.49□□□□□ -1.21
CDH12-204ENST00000518209 TTLL8A6PVC2 850 aa7.48□□□□□ -1.21
CDH12-204ENST00000518209 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
CDH12-204ENST00000518209 SRSF11Q05519 484 aaKnown RBP7.48□□□□□ -1.21
CDH12-204ENST00000518209 SEPT12Q8IYM1 358 aa7.48□□□□□ -1.21
CDH12-204ENST00000518209 VWA5B2Q8N398 1253 aa7.48□□□□□ -1.21
CDH12-204ENST00000518209 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
CDH12-204ENST00000518209 ESPNB1AK53 854 aa7.47□□□□□ -1.21
CDH12-204ENST00000518209 GPR37L1O60883 481 aa7.47□□□□□ -1.21
CDH12-204ENST00000518209 ITGA6P23229 1130 aa7.47□□□□□ -1.21
CDH12-204ENST00000518209 RAB15P59190 212 aa7.47□□□□□ -1.21
CDH12-204ENST00000518209 CCDC125Q86Z20 511 aa7.47□□□□□ -1.21
CDH12-204ENST00000518209 CNTNAP5Q8WYK1 1306 aa7.47□□□□□ -1.21
CDH12-204ENST00000518209 CDC14CA4D256 554 aa7.46□□□□□ -1.22
CDH12-204ENST00000518209 Q6ZVU0 165 aa7.46□□□□□ -1.22
CDH12-204ENST00000518209 TBC1D2BQ9UPU7 963 aa7.46□□□□□ -1.22
CDH12-204ENST00000518209 ERVH48-1M5A8F1 160 aa7.45□□□□□ -1.22
CDH12-204ENST00000518209 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
CDH12-204ENST00000518209 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
CDH12-204ENST00000518209 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
CDH12-204ENST00000518209 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
CDH12-204ENST00000518209 SLC35F4A4IF30 521 aa7.44□□□□□ -1.22
CDH12-204ENST00000518209 FURINP09958 794 aa7.44□□□□□ -1.22
CDH12-204ENST00000518209 CBLBQ13191 982 aa7.44□□□□□ -1.22
CDH12-204ENST00000518209 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
CDH12-204ENST00000518209 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
CDH12-204ENST00000518209 ZNF784Q8NCA9 323 aaPredicted RBP7.43□□□□□ -1.22
CDH12-204ENST00000518209 EIF4G2P78344 907 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDH12-204ENST00000518209 MCM6Q14566 821 aa7.42□□□□□ -1.22
CDH12-204ENST00000518209 GDPD2Q9HCC8 539 aa7.42□□□□□ -1.22
CDH12-204ENST00000518209 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
CDH12-204ENST00000518209 ABL2P42684 1182 aa7.41□□□□□ -1.22
CDH12-204ENST00000518209 SPINT1O43278 529 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 LILRA1O75019 489 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 ADD1P35611 737 aaKnown RBP7.4□□□□□ -1.22
CDH12-204ENST00000518209 RELBQ01201 579 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 FLIIQ13045 1269 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 IRF5Q13568 498 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 WASHC4Q2M389 1173 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 AGBL1Q96MI9 1066 aa7.4□□□□□ -1.22
CDH12-204ENST00000518209 ADH1AP07327 375 aa7.39□□□□□ -1.23
CDH12-204ENST00000518209 CYLDQ9NQC7 956 aa7.39□□□□□ -1.23
CDH12-204ENST00000518209 CEP126Q9P2H0 1117 aa7.39□□□□□ -1.23
CDH12-204ENST00000518209 ALYREFQ86V81 257 aaKnown RBP7.38□□□□□ -1.23
CDH12-204ENST00000518209 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
CDH12-204ENST00000518209 PTGIRP43119 386 aa7.37□□□□□ -1.23
CDH12-204ENST00000518209 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
CDH12-204ENST00000518209 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
CDH12-204ENST00000518209 WWC1Q8IX03 1113 aa7.37□□□□□ -1.23
CDH12-204ENST00000518209 ZNF395Q9H8N7 513 aaPredicted RBP7.37□□□□□ -1.23
CDH12-204ENST00000518209 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
CDH12-204ENST00000518209 PCDHB11Q9Y5F2 797 aa7.37□□□□□ -1.23
CDH12-204ENST00000518209 RAD21O60216 631 aa7.36□□□□□ -1.23
CDH12-204ENST00000518209 BCRP11274 1271 aa7.36□□□□□ -1.23
CDH12-204ENST00000518209 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
CDH12-204ENST00000518209 INSM2Q96T92 566 aaPredicted RBP7.36□□□□□ -1.23
CDH12-204ENST00000518209 ZMYND15Q9H091 742 aa7.36□□□□□ -1.23
CDH12-204ENST00000518209 ATP5J2-PTCD1G3V325 749 aa7.35□□□□□ -1.23
CDH12-204ENST00000518209 CTSOP43234 321 aaPredicted RBP7.35□□□□□ -1.23
CDH12-204ENST00000518209 SLFNL1Q499Z3 407 aa7.35□□□□□ -1.23
CDH12-204ENST00000518209 KDF1Q8NAX2 398 aaPredicted RBP7.35□□□□□ -1.23
CDH12-204ENST00000518209 POLMQ9NP87 494 aaPredicted RBP7.35□□□□□ -1.23
CDH12-204ENST00000518209 KRBA1A5PL33 1030 aa7.34□□□□□ -1.23
CDH12-204ENST00000518209 UBTFP17480 764 aaKnown RBP7.34□□□□□ -1.23
CDH12-204ENST00000518209 SOX11P35716 441 aa7.34□□□□□ -1.23
CDH12-204ENST00000518209 SEMA3FQ13275 785 aa7.34□□□□□ -1.23
CDH12-204ENST00000518209 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
CDH12-204ENST00000518209 GAS6Q14393 721 aa7.33□□□□□ -1.24
CDH12-204ENST00000518209 CYP2U1Q7Z449 544 aa7.33□□□□□ -1.24
CDH12-204ENST00000518209 PHTF2Q8N3S3 785 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms