RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 NUTM1Q86Y26 1132 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 SPIRE2Q8WWL2 714 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
CPS1-210ENST00000518043 RSPH6AQ9H0K4 717 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 TNRQ92752 1358 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 PPP4CP60510 307 aa9.86□□□□□ -0.83
CPS1-210ENST00000518043 IDI1Q13907 227 aa9.86□□□□□ -0.83
CPS1-210ENST00000518043 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
CPS1-210ENST00000518043 THSD4Q6ZMP0 1018 aa9.86□□□□□ -0.83
CPS1-210ENST00000518043 GOPCQ9HD26 462 aa9.86□□□□□ -0.83
CPS1-210ENST00000518043 TSR3Q9UJK0 312 aaKnown RBP9.86□□□□□ -0.83
CPS1-210ENST00000518043 ZNF142P52746 1687 aaPredicted RBP9.86□□□□□ -0.83
CPS1-210ENST00000518043 KIAA1210Q9ULL0 1709 aa9.85□□□□□ -0.83
CPS1-210ENST00000518043 KDM4AO75164 1064 aa9.85□□□□□ -0.83
CPS1-210ENST00000518043 CEBPAP49715 358 aaPredicted RBP9.85□□□□□ -0.83
CPS1-210ENST00000518043 MYSM1Q5VVJ2 828 aa9.85□□□□□ -0.83
CPS1-210ENST00000518043 LAMC1P11047 1609 aa9.85□□□□□ -0.83
CPS1-210ENST00000518043 SLC52A1Q9NWF4 448 aa9.84□□□□□ -0.83
CPS1-210ENST00000518043 SETD1AO15047 1707 aaKnown RBP9.84□□□□□ -0.83
CPS1-210ENST00000518043 PTPRMP28827 1452 aa9.84□□□□□ -0.83
CPS1-210ENST00000518043 NLRP1Q9C000 1473 aa9.84□□□□□ -0.83
CPS1-210ENST00000518043 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
CPS1-210ENST00000518043 NRXN3Q9Y4C0 1643 aa9.83□□□□□ -0.84
CPS1-210ENST00000518043 RGL3Q3MIN7 710 aa9.83□□□□□ -0.84
CPS1-210ENST00000518043 KMT5BQ4FZB7 885 aa9.83□□□□□ -0.84
CPS1-210ENST00000518043 GPRASP1Q5JY77 1395 aa9.83□□□□□ -0.84
CPS1-210ENST00000518043 USP46P62068 366 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
CPS1-210ENST00000518043 DCAF11Q8TEB1 546 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 POLR3EQ9NVU0 708 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 WBP1LQ9NX94 342 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
CPS1-210ENST00000518043 IQGAP1P46940 1657 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
CPS1-210ENST00000518043 ADGRB1O14514 1584 aa9.81□□□□□ -0.84
CPS1-210ENST00000518043 ARHGAP23Q9P227 1491 aa9.81□□□□□ -0.84
CPS1-210ENST00000518043 FUT2Q10981 343 aa9.81□□□□□ -0.84
CPS1-210ENST00000518043 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
CPS1-210ENST00000518043 PRR14Q9BWN1 585 aa9.81□□□□□ -0.84
CPS1-210ENST00000518043 ADGRF5Q8IZF2 1346 aa9.81□□□□□ -0.84
CPS1-210ENST00000518043 MOXD2PA6NHM9 499 aa9.8□□□□□ -0.84
CPS1-210ENST00000518043 HOXA2O43364 376 aa9.8□□□□□ -0.84
CPS1-210ENST00000518043 ACTN4O43707 911 aaKnown RBP9.8□□□□□ -0.84
CPS1-210ENST00000518043 CLK2P49760 499 aaKnown RBP9.8□□□□□ -0.84
CPS1-210ENST00000518043 APLP1P51693 650 aa9.8□□□□□ -0.84
CPS1-210ENST00000518043 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
CPS1-210ENST00000518043 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
CPS1-210ENST00000518043 ESF1Q9H501 851 aaKnown RBP9.8□□□□□ -0.84
CPS1-210ENST00000518043 SETD1BQ9UPS6 1966 aaKnown RBP9.8□□□□□ -0.84
CPS1-210ENST00000518043 SLIT1O75093 1534 aa9.8□□□□□ -0.84
CPS1-210ENST00000518043 NDUFV2P19404 249 aa9.79□□□□□ -0.84
CPS1-210ENST00000518043 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
CPS1-210ENST00000518043 LIMD1Q9UGP4 676 aa9.79□□□□□ -0.84
CPS1-210ENST00000518043 SETBP1Q9Y6X0 1596 aa9.79□□□□□ -0.84
CPS1-210ENST00000518043 RPGRIP1LQ68CZ1 1315 aa9.79□□□□□ -0.84
CPS1-210ENST00000518043 SPTLC1O15269 473 aa9.78□□□□□ -0.84
CPS1-210ENST00000518043 ATP6V1AP38606 617 aa9.78□□□□□ -0.84
CPS1-210ENST00000518043 PTPN5P54829 565 aa9.78□□□□□ -0.84
CPS1-210ENST00000518043 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
CPS1-210ENST00000518043 RIMS2Q9UQ26 1411 aa9.78□□□□□ -0.84
CPS1-210ENST00000518043 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
CPS1-210ENST00000518043 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
CPS1-210ENST00000518043 HLA-CQ95604 372 aa9.77□□□□□ -0.85
CPS1-210ENST00000518043 TMEM2Q9UHN6 1383 aa9.76□□□□□ -0.85
CPS1-210ENST00000518043 GJA5P36382 358 aa9.76□□□□□ -0.85
CPS1-210ENST00000518043 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
CPS1-210ENST00000518043 RNF166Q96A37 237 aaPredicted RBP9.76□□□□□ -0.85
CPS1-210ENST00000518043 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
CPS1-210ENST00000518043 ALKQ9UM73 1620 aa9.75□□□□□ -0.85
CPS1-210ENST00000518043 FDX1P10109 184 aa9.75□□□□□ -0.85
CPS1-210ENST00000518043 GUCA2AQ02747 115 aa9.75□□□□□ -0.85
CPS1-210ENST00000518043 TUSC1Q2TAM9 212 aa9.75□□□□□ -0.85
CPS1-210ENST00000518043 PUS10Q3MIT2 529 aaKnown RBP9.75□□□□□ -0.85
CPS1-210ENST00000518043 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
CPS1-210ENST00000518043 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPS1-210ENST00000518043 MED14O60244 1454 aa9.74□□□□□ -0.85
CPS1-210ENST00000518043 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
CPS1-210ENST00000518043 MORN1Q5T089 497 aa9.74□□□□□ -0.85
CPS1-210ENST00000518043 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
CPS1-210ENST00000518043 PCDHB3Q9Y5E6 796 aa9.74□□□□□ -0.85
CPS1-210ENST00000518043 PCDHB15Q9Y5E8 787 aa9.74□□□□□ -0.85
CPS1-210ENST00000518043 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
CPS1-210ENST00000518043 ROCK2O75116 1388 aaKnown RBP9.74□□□□□ -0.85
CPS1-210ENST00000518043 USP47Q96K76 1375 aa9.74□□□□□ -0.85
CPS1-210ENST00000518043 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
CPS1-210ENST00000518043 HSPA5P11021 654 aaKnown RBP9.73□□□□□ -0.85
CPS1-210ENST00000518043 CSPP1Q1MSJ5 1256 aa9.73□□□□□ -0.85
CPS1-210ENST00000518043 CFAP70Q5T0N1 1121 aa9.73□□□□□ -0.85
CPS1-210ENST00000518043 C14orf93Q9H972 538 aaKnown RBP9.73□□□□□ -0.85
CPS1-210ENST00000518043 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
CPS1-210ENST00000518043 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
CPS1-210ENST00000518043 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.85
CPS1-210ENST00000518043 LTKP29376 864 aa9.71□□□□□ -0.86
CPS1-210ENST00000518043 HIRIP3Q9BW71 556 aaPredicted RBP9.71□□□□□ -0.86
CPS1-210ENST00000518043 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
CPS1-210ENST00000518043 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
CPS1-210ENST00000518043 QPCTQ16769 361 aa9.7□□□□□ -0.86
CPS1-210ENST00000518043 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms