RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 DZIP3Q86Y13 1208 aaKnown RBP8.94□□□□□ -0.98
PCM1-205ENST00000517836 IRF7Q92985 503 aa8.94□□□□□ -0.98
PCM1-205ENST00000517836 TSEN34Q9BSV6 310 aaKnown RBP8.94□□□□□ -0.98
PCM1-205ENST00000517836 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
PCM1-205ENST00000517836 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
PCM1-205ENST00000517836 Q6ZVU0 165 aa8.93□□□□□ -0.98
PCM1-205ENST00000517836 NPAS3Q8IXF0 933 aa8.93□□□□□ -0.98
PCM1-205ENST00000517836 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
PCM1-205ENST00000517836 ATP9BO43861 1147 aa8.92□□□□□ -0.98
PCM1-205ENST00000517836 RELBQ01201 579 aa8.92□□□□□ -0.98
PCM1-205ENST00000517836 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
PCM1-205ENST00000517836 CDV3Q9UKY7 258 aaKnown RBP8.92□□□□□ -0.98
PCM1-205ENST00000517836 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 TTLL8A6PVC2 850 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 ERVH48-1M5A8F1 160 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 PPFIA3O75145 1194 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 SLFNL1Q499Z3 407 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 PBXIP1Q96AQ6 731 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
PCM1-205ENST00000517836 ZNF395Q9H8N7 513 aaPredicted RBP8.91□□□□□ -0.98
PCM1-205ENST00000517836 ACIN1Q9UKV3 1341 aaKnown RBP8.9□□□□□ -0.98
PCM1-205ENST00000517836 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
PCM1-205ENST00000517836 DHX9Q08211 1270 aaKnown RBP8.9□□□□□ -0.98
PCM1-205ENST00000517836 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
PCM1-205ENST00000517836 ZNF784Q8NCA9 323 aaPredicted RBP8.9□□□□□ -0.98
PCM1-205ENST00000517836 MAFBQ9Y5Q3 323 aaPredicted RBP8.9□□□□□ -0.98
PCM1-205ENST00000517836 SPINT1O43278 529 aa8.89□□□□□ -0.99
PCM1-205ENST00000517836 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
PCM1-205ENST00000517836 ADD1P35611 737 aaKnown RBP8.89□□□□□ -0.99
PCM1-205ENST00000517836 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
PCM1-205ENST00000517836 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
PCM1-205ENST00000517836 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
PCM1-205ENST00000517836 INSM2Q96T92 566 aaPredicted RBP8.89□□□□□ -0.99
PCM1-205ENST00000517836 LILRA1O75019 489 aa8.88□□□□□ -0.99
PCM1-205ENST00000517836 SKIP12755 728 aa8.88□□□□□ -0.99
PCM1-205ENST00000517836 RFX1P22670 979 aa8.88□□□□□ -0.99
PCM1-205ENST00000517836 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
PCM1-205ENST00000517836 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
PCM1-205ENST00000517836 ESPNB1AK53 854 aa8.87□□□□□ -0.99
PCM1-205ENST00000517836 PIK3CDO00329 1044 aa8.87□□□□□ -0.99
PCM1-205ENST00000517836 LZTS3O60299 673 aaPredicted RBP8.87□□□□□ -0.99
PCM1-205ENST00000517836 PTSQ03393 145 aa8.87□□□□□ -0.99
PCM1-205ENST00000517836 MAP7D1Q3KQU3 841 aa8.87□□□□□ -0.99
PCM1-205ENST00000517836 PLEKHM2Q8IWE5 1019 aa8.87□□□□□ -0.99
PCM1-205ENST00000517836 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
PCM1-205ENST00000517836 KDF1Q8NAX2 398 aaPredicted RBP8.87□□□□□ -0.99
PCM1-205ENST00000517836 USP17L5A8MUK1 530 aa8.86□□□□□ -0.99
PCM1-205ENST00000517836 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
PCM1-205ENST00000517836 SRPK2P78362 688 aaKnown RBP8.86□□□□□ -0.99
PCM1-205ENST00000517836 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.993e-7■■■□□ 16.7
PCM1-205ENST00000517836 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
PCM1-205ENST00000517836 CYLDQ9NQC7 956 aa8.86□□□□□ -0.99
PCM1-205ENST00000517836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.85□□□□□ -0.99
PCM1-205ENST00000517836 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
PCM1-205ENST00000517836 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
PCM1-205ENST00000517836 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 FAM181BA6NEQ2 426 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 VSIG8P0DPA2 414 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 PDE4CQ08493 712 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
PCM1-205ENST00000517836 VRTNQ9H8Y1 702 aa8.84□□□□□ -0.99
PCM1-205ENST00000517836 POLMQ9NP87 494 aaPredicted RBP8.84□□□□□ -0.99
PCM1-205ENST00000517836 ADH1AP07327 375 aa8.83□□□□□ -1
PCM1-205ENST00000517836 ZSCAN1Q8NBB4 408 aa8.83□□□□□ -1
PCM1-205ENST00000517836 DOLKQ9UPQ8 538 aa8.82□□□□□ -1
PCM1-205ENST00000517836 ATG7O95352 703 aa8.81□□□□□ -1
PCM1-205ENST00000517836 PDIA4P13667 645 aaKnown RBP8.81□□□□□ -1
PCM1-205ENST00000517836 PTGIRP43119 386 aa8.81□□□□□ -1
PCM1-205ENST00000517836 EML3Q32P44 896 aa8.81□□□□□ -1
PCM1-205ENST00000517836 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
PCM1-205ENST00000517836 TRIM52Q96A61 297 aa8.81□□□□□ -1
PCM1-205ENST00000517836 ATP5J2-PTCD1G3V325 749 aa8.8□□□□□ -1
PCM1-205ENST00000517836 NCOA4Q13772 614 aa8.8□□□□□ -1
PCM1-205ENST00000517836 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
PCM1-205ENST00000517836 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
PCM1-205ENST00000517836 RETREG2Q8NC44 543 aa8.8□□□□□ -1
PCM1-205ENST00000517836 RNF217Q8TC41 542 aa8.8□□□□□ -1
PCM1-205ENST00000517836 SIRT1Q96EB6 747 aa8.8□□□□□ -1
PCM1-205ENST00000517836 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
PCM1-205ENST00000517836 KRT76Q01546 638 aa8.79□□□□□ -1
PCM1-205ENST00000517836 TRIM50Q86XT4 487 aa8.79□□□□□ -1
PCM1-205ENST00000517836 DEPDC4Q8N2C3 294 aa8.79□□□□□ -1
PCM1-205ENST00000517836 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
PCM1-205ENST00000517836 SLC35F4A4IF30 521 aa8.78□□□□□ -1
PCM1-205ENST00000517836 ELOAQ14241 798 aaKnown RBP8.78□□□□□ -1
PCM1-205ENST00000517836 MKRN1Q9UHC7 482 aaKnown RBP8.78□□□□□ -1
PCM1-205ENST00000517836 NOD1Q9Y239 953 aa8.78□□□□□ -1
PCM1-205ENST00000517836 USTQ9Y2C2 406 aa8.78□□□□□ -1
PCM1-205ENST00000517836 SENP3-EIF4A1A0A087X0R7 540 aa8.77□□□□□ -1.01
PCM1-205ENST00000517836 FAM196BA6NMK8 535 aa8.77□□□□□ -1.01
PCM1-205ENST00000517836 SCTRP47872 440 aa8.77□□□□□ -1.01
PCM1-205ENST00000517836 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
PCM1-205ENST00000517836 TRAIPQ9BWF2 469 aa8.77□□□□□ -1.01
PCM1-205ENST00000517836 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
PCM1-205ENST00000517836 ATP1A2P50993 1020 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 USP4Q13107 963 aa8.76□□□□□ -1.01
PCM1-205ENST00000517836 TSGA10IPQ3SY00 556 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms