RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CDK11BP21127 795 aaKnown RBP4.07□□□□□ -1.76
SKP1-204ENST00000517691 PLA2G4EQ3MJ16 856 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 TSKSQ9UJT2 592 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 MTMR7Q9Y216 660 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 FRMPD1Q5SYB0 1578 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 CCDC141Q6ZP82 1450 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 MLH3Q9UHC1 1453 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 KIF3BO15066 747 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 ABCC5O15440 1437 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 MAP3K7O43318 606 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 C9orf84Q5VXU9 1444 aa4.07□□□□□ -1.76
SKP1-204ENST00000517691 RICTORQ6R327 1708 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 RTEL1-TNFRSF6BF6WH68 1400 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 MARSP56192 900 aaKnown RBP4.06□□□□□ -1.76
SKP1-204ENST00000517691 MDM2Q00987 491 aaPredicted RBP4.06□□□□□ -1.76
SKP1-204ENST00000517691 FLIIQ13045 1269 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 FAM161AQ3B820 660 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 TYW1BQ6NUM6 668 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 CHMP4AQ9BY43 222 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 PTPN23Q9H3S7 1636 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 ZMYM4Q5VZL5 1548 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 DHX29Q7Z478 1369 aaKnown RBP4.06□□□□□ -1.76
SKP1-204ENST00000517691 ANKRD30AQ9BXX3 1397 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 KDM5CP41229 1560 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 DAPK1P53355 1430 aa4.06□□□□□ -1.76
SKP1-204ENST00000517691 PROCP04070 461 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 SSTR3P32745 418 aaPredicted RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 CLCN1P35523 988 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 FOXD4L5Q5VV16 416 aaPredicted RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 FOXD4L4Q8WXT5 416 aaPredicted RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 PRR14Q9BWN1 585 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 A2MP01023 1474 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 TCOF1Q13428 1488 aaKnown RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 ATP7AQ04656 1500 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 HECW2Q9P2P5 1572 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 KIF15Q9NS87 1388 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 CD2BP2O95400 341 aaKnown RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 YBX3P16989 372 aaKnown RBP eCLIP4.05□□□□□ -1.761e-12■■□□□ 14.1
SKP1-204ENST00000517691 CEBPAP49715 358 aaPredicted RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 HDGFP51858 240 aaKnown RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 SH3D19Q5HYK7 790 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 CCDC82Q8N4S0 544 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 NLRP7Q8WX94 980 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 PCMTD1Q96MG8 357 aaPredicted RBP4.05□□□□□ -1.76
SKP1-204ENST00000517691 GPCPD1Q9NPB8 672 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 ARHGEF40Q8TER5 1519 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 WASHC2CQ9Y4E1 1318 aa4.05□□□□□ -1.76
SKP1-204ENST00000517691 RBM25P49756 843 aaKnown RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 PROCA1Q8NCQ7 364 aaPredicted RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 ARHGEF5Q12774 1597 aa4.04□□□□□ -1.76
SKP1-204ENST00000517691 DIP2CQ9Y2E4 1556 aa4.04□□□□□ -1.76
SKP1-204ENST00000517691 PPEF1O14829 653 aaPredicted RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 HSP90B1P14625 803 aaKnown RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 SMPD1P17405 629 aa4.04□□□□□ -1.76
SKP1-204ENST00000517691 SKIV2LQ15477 1246 aaKnown RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 METTL3Q86U44 580 aaKnown RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 TTC13Q8NBP0 860 aa4.04□□□□□ -1.76
SKP1-204ENST00000517691 CLUAP1Q96AJ1 413 aa4.04□□□□□ -1.76
SKP1-204ENST00000517691 FAM217BQ9NTX9 383 aaPredicted RBP4.04□□□□□ -1.76
SKP1-204ENST00000517691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.03□□□□□ -1.76
SKP1-204ENST00000517691 PTPRKQ15262 1439 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 NCOA1Q15788 1441 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 ABCA6Q8N139 1617 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 KIDINS220Q9ULH0 1771 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 A6NJR5 290 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 AEBP1Q8IUX7 1158 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 PXYLP1Q8TE99 480 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 BEGAINQ9BUH8 593 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 ADGRG1Q9Y653 693 aa4.03□□□□□ -1.76
SKP1-204ENST00000517691 RRBP1Q9P2E9 1410 aaKnown RBP4.03□□□□□ -1.76
SKP1-204ENST00000517691 INO80Q9ULG1 1556 aaPredicted RBP4.03□□□□□ -1.76
SKP1-204ENST00000517691 S1PR4O95977 384 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 MCM6Q14566 821 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 PADI6Q6TGC4 694 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 SNIP1Q8TAD8 396 aaKnown RBP4.02□□□□□ -1.77
SKP1-204ENST00000517691 TRIM52Q96A61 297 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 CDCA7LQ96GN5 454 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 ARID1BQ8NFD5 2236 aaPredicted RBP4.02□□□□□ -1.77
SKP1-204ENST00000517691 ZMYM3Q14202 1370 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 KANK1Q14678 1352 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 SHANK2Q9UPX8 1470 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 DNMT1P26358 1616 aaKnown RBP4.02□□□□□ -1.77
SKP1-204ENST00000517691 TRAK2O60296 914 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 OATP04181 439 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 HMGB1P09429 215 aaKnown RBP4.02□□□□□ -1.77
SKP1-204ENST00000517691 FBXO31Q5XUX0 539 aaPredicted RBP4.02□□□□□ -1.77
SKP1-204ENST00000517691 PUS7Q96PZ0 661 aaKnown RBP4.02□□□□□ -1.77
SKP1-204ENST00000517691 POLR3EQ9NVU0 708 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 ROCK1Q13464 1354 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 ANKRD50Q9ULJ7 1429 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 PTPRMP28827 1452 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 AGLP35573 1532 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 DUOX2Q9NRD8 1548 aa4.02□□□□□ -1.77
SKP1-204ENST00000517691 MAST1Q9Y2H9 1570 aa4.01□□□□□ -1.77
SKP1-204ENST00000517691 CNTLNQ9NXG0 1405 aa4.01□□□□□ -1.77
SKP1-204ENST00000517691 MYSM1Q5VVJ2 828 aa4.01□□□□□ -1.77
SKP1-204ENST00000517691 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.01□□□□□ -1.77
SKP1-204ENST00000517691 REREQ9P2R6 1566 aa4.01□□□□□ -1.77
SKP1-204ENST00000517691 ADGRL2O95490 1459 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms