RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 H7C1W4 665 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 CCNYL3P0C7X3 344 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 NRG1Q02297 640 aaPredicted RBP2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 GRIPAP1Q4V328 841 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 LYSMD3Q7Z3D4 306 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 CADPS2Q86UW7 1296 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 TXNRD3Q86VQ6 643 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 HLA-CQ95604 372 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 SSBP4Q9BWG4 385 aaPredicted RBP2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 TMPRSS5Q9H3S3 457 aa2.59□□□□□ -1.99
RNU6-539P-201ENST00000516665 IGHA2P01877 340 aa2.58□□□□□ -2
RNU6-539P-201ENST00000516665 PRICKLE2Q7Z3G6 844 aa2.58□□□□□ -2
RNU6-539P-201ENST00000516665 CCDC116Q8IYX3 515 aa2.58□□□□□ -2
RNU6-539P-201ENST00000516665 PXYLP1Q8TE99 480 aa2.58□□□□□ -2
RNU6-539P-201ENST00000516665 NEURL1BA8MQ27 555 aa2.57□□□□□ -2
RNU6-539P-201ENST00000516665 THBS1P07996 1170 aa2.57□□□□□ -2
RNU6-539P-201ENST00000516665 C4orf48Q5BLP8 95 aa2.57□□□□□ -2
RNU6-539P-201ENST00000516665 DBX2Q6ZNG2 339 aa2.57□□□□□ -2
RNU6-539P-201ENST00000516665 HS6ST3Q8IZP7 471 aa2.57□□□□□ -2
RNU6-539P-201ENST00000516665 ASIC4Q96FT7 647 aa2.57□□□□□ -2
RNU6-539P-201ENST00000516665 GAS2L1Q99501 681 aaPredicted RBP2.57□□□□□ -2
RNU6-539P-201ENST00000516665 BMP4P12644 408 aa2.56□□□□□ -2
RNU6-539P-201ENST00000516665 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
RNU6-539P-201ENST00000516665 SYMPKQ92797 1274 aaKnown RBP2.56□□□□□ -2
RNU6-539P-201ENST00000516665 CFHR5Q9BXR6 569 aa2.56□□□□□ -2
RNU6-539P-201ENST00000516665 NUCKS1Q9H1E3 243 aaKnown RBP2.56□□□□□ -2
RNU6-539P-201ENST00000516665 SPDYE3A6NKU9 549 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 SPINK2P20155 84 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 PTGDRQ13258 359 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 PPP1R26Q5T8A7 1209 aaPredicted RBP2.55□□□□□ -2
RNU6-539P-201ENST00000516665 LCNL1Q6ZST4 164 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 TTLL10Q6ZVT0 673 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 GGNQ86UU5 652 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 LMCD1Q9NZU5 365 aa2.55□□□□□ -2
RNU6-539P-201ENST00000516665 TGFB1P01137 390 aa2.54□□□□□ -2
RNU6-539P-201ENST00000516665 SELPP16109 830 aa2.54□□□□□ -2
RNU6-539P-201ENST00000516665 PAXIP1Q6ZW49 1069 aaPredicted RBP2.54□□□□□ -2
RNU6-539P-201ENST00000516665 ABI1Q8IZP0 508 aa2.54□□□□□ -2
RNU6-539P-201ENST00000516665 RYDENQ9NUL5 291 aaKnown RBP2.54□□□□□ -2
RNU6-539P-201ENST00000516665 EVA1BQ9NVM1 165 aa2.54□□□□□ -2
RNU6-539P-201ENST00000516665 C9orf172C9J069 976 aa2.53□□□□□ -2
RNU6-539P-201ENST00000516665 FSTP19883 344 aa2.53□□□□□ -2
RNU6-539P-201ENST00000516665 KRTAP10-2P60368 255 aa2.53□□□□□ -2
RNU6-539P-201ENST00000516665 KCNH2Q12809 1159 aa2.53□□□□□ -2
RNU6-539P-201ENST00000516665 DAXXQ9UER7 740 aaPredicted RBP2.53□□□□□ -2
RNU6-539P-201ENST00000516665 DYRK1BQ9Y463 629 aa2.53□□□□□ -2
RNU6-539P-201ENST00000516665 MS4A1P11836 297 aa2.52□□□□□ -2.01
RNU6-539P-201ENST00000516665 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
RNU6-539P-201ENST00000516665 NLRP7Q8WX94 980 aa2.52□□□□□ -2.01
RNU6-539P-201ENST00000516665 PGPEP1Q9NXJ5 209 aa2.52□□□□□ -2.01
RNU6-539P-201ENST00000516665 CTBSQ01459 385 aa2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 GUCA2AQ02747 115 aa2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 TRIM28Q13263 835 aaKnown RBP2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 PKN1Q16512 942 aa2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 SHISA2Q6UWI4 295 aa2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 PRR23CQ6ZRP0 262 aa2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 VASH1Q7L8A9 365 aaPredicted RBP2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 METTL3Q86U44 580 aaKnown RBP2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 CILP2Q8IUL8 1156 aa2.51□□□□□ -2.01
RNU6-539P-201ENST00000516665 WNT11O96014 354 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 ARAFP10398 606 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 ITGB5P18084 799 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 PTPRNQ16849 979 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 FCHSD1Q86WN1 690 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 ACSS3Q9H6R3 686 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 RAPGEFL1Q9UHV5 662 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 PHF24Q9UPV7 400 aa2.5□□□□□ -2.01
RNU6-539P-201ENST00000516665 AGERQ15109 404 aa2.49□□□□□ -2.01
RNU6-539P-201ENST00000516665 ZDHHC13Q8IUH4 622 aa2.49□□□□□ -2.01
RNU6-539P-201ENST00000516665 KLF15Q9UIH9 416 aa2.49□□□□□ -2.01
RNU6-539P-201ENST00000516665 KDM2AQ9Y2K7 1162 aa2.49□□□□□ -2.01
RNU6-539P-201ENST00000516665 MAP4K5Q9Y4K4 846 aa2.49□□□□□ -2.01
RNU6-539P-201ENST00000516665 OATP04181 439 aa2.48□□□□□ -2.01
RNU6-539P-201ENST00000516665 CTSWP56202 376 aa2.48□□□□□ -2.01
RNU6-539P-201ENST00000516665 UBAP2LQ14157 1087 aaKnown RBP2.48□□□□□ -2.01
RNU6-539P-201ENST00000516665 ECM1Q16610 540 aa2.48□□□□□ -2.01
RNU6-539P-201ENST00000516665 RETREG3Q86VR2 466 aa2.48□□□□□ -2.01
RNU6-539P-201ENST00000516665 C1QL4Q86Z23 238 aa2.48□□□□□ -2.01
RNU6-539P-201ENST00000516665 FGFR3P22607 806 aa2.47□□□□□ -2.01
RNU6-539P-201ENST00000516665 CFPP27918 469 aa2.47□□□□□ -2.01
RNU6-539P-201ENST00000516665 CBLL1Q75N03 491 aa2.47□□□□□ -2.01
RNU6-539P-201ENST00000516665 DTX1Q86Y01 620 aa2.47□□□□□ -2.01
RNU6-539P-201ENST00000516665 SULF1Q8IWU6 871 aa2.47□□□□□ -2.01
RNU6-539P-201ENST00000516665 ABHD17AQ96GS6 310 aa2.47□□□□□ -2.01
RNU6-539P-201ENST00000516665 PTGIRP43119 386 aa2.46□□□□□ -2.02
RNU6-539P-201ENST00000516665 KDF1Q8NAX2 398 aaPredicted RBP2.46□□□□□ -2.02
RNU6-539P-201ENST00000516665 LENG1Q96BZ8 264 aaPredicted RBP2.46□□□□□ -2.02
RNU6-539P-201ENST00000516665 MYRFLQ96LU7 910 aa2.46□□□□□ -2.02
RNU6-539P-201ENST00000516665 C1QTNF2Q9BXJ5 285 aa2.46□□□□□ -2.02
RNU6-539P-201ENST00000516665 FARP2O94887 1054 aaPredicted RBP2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 INHBBP09529 407 aa2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 JUNBP17275 347 aaPredicted RBP2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 RNF144AP50876 292 aaPredicted RBP2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 POU4F2Q12837 409 aa2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 ATXN7L1Q9ULK2 861 aaPredicted RBP2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.45□□□□□ -2.02
RNU6-539P-201ENST00000516665 KDM4AO75164 1064 aa2.44□□□□□ -2.02
RNU6-539P-201ENST00000516665 F11P03951 625 aa2.44□□□□□ -2.02
RNU6-539P-201ENST00000516665 ADH6P28332 368 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms