RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
SCARNA21.2-201ENST00000516600 COL18A1P39060 1754 aa8.67□□□□□ -1.02
SCARNA21.2-201ENST00000516600 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
SCARNA21.2-201ENST00000516600 PPIP5K1Q6PFW1 1433 aa8.67□□□□□ -1.02
SCARNA21.2-201ENST00000516600 MINK1Q8N4C8 1332 aaPredicted RBP8.67□□□□□ -1.02
SCARNA21.2-201ENST00000516600 CCDC7Q96M83 1385 aa8.67□□□□□ -1.02
SCARNA21.2-201ENST00000516600 CUL9Q8IWT3 2517 aa8.66□□□□□ -1.02
SCARNA21.2-201ENST00000516600 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
SCARNA21.2-201ENST00000516600 SYTL4Q96C24 671 aaPredicted RBP8.66□□□□□ -1.02
SCARNA21.2-201ENST00000516600 MCOLN1Q9GZU1 580 aa8.66□□□□□ -1.02
SCARNA21.2-201ENST00000516600 ROCK1Q13464 1354 aa8.65□□□□□ -1.02
SCARNA21.2-201ENST00000516600 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
SCARNA21.2-201ENST00000516600 LY75O60449 1722 aa8.65□□□□□ -1.03
SCARNA21.2-201ENST00000516600 VIRMAQ69YN4 1812 aaKnown RBP8.64□□□□□ -1.03
SCARNA21.2-201ENST00000516600 N4BP2Q86UW6 1770 aaPredicted RBP8.64□□□□□ -1.03
SCARNA21.2-201ENST00000516600 A0A0G2JLW4 131 aa8.64□□□□□ -1.03
SCARNA21.2-201ENST00000516600 TGFB2P61812 414 aa8.64□□□□□ -1.03
SCARNA21.2-201ENST00000516600 AXIN2Q9Y2T1 843 aa8.64□□□□□ -1.03
SCARNA21.2-201ENST00000516600 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
SCARNA21.2-201ENST00000516600 HABP4Q5JVS0 413 aaKnown RBP8.63□□□□□ -1.03
SCARNA21.2-201ENST00000516600 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
SCARNA21.2-201ENST00000516600 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 POLR3AO14802 1390 aaPredicted RBP8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 ACEP12821 1306 aa8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 GLTPD2A6NH11 291 aa8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 SOX10P56693 466 aa8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 RGL3Q3MIN7 710 aa8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 NUDT16Q96DE0 195 aaKnown RBP8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 ZNF219Q9P2Y4 722 aaPredicted RBP8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 SPATA31E1Q6ZUB1 1445 aa8.62□□□□□ -1.03
SCARNA21.2-201ENST00000516600 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 IL2RBP14784 551 aa8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 C14orf93Q9H972 538 aaKnown RBP8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 C5P01031 1676 aa8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 QRICH2Q9H0J4 1663 aa8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 CPSF1Q10570 1443 aaKnown RBP8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 KIF13BQ9NQT8 1826 aa8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
SCARNA21.2-201ENST00000516600 TMEM88BA6NKF7 163 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 PHF14O94880 888 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 DPEP1P16444 411 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 APLP2Q06481 763 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 DGKZQ13574 1117 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 SMIM5Q71RC9 77 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 NBPF15Q8N660 670 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 USP47Q96K76 1375 aa8.6□□□□□ -1.03
SCARNA21.2-201ENST00000516600 NLRP6P59044 892 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 AK7Q96M32 723 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 NSD3Q9BZ95 1437 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 ANKRD36BQ8N2N9 1353 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 SLIT3O75094 1523 aa8.59□□□□□ -1.03
SCARNA21.2-201ENST00000516600 RGPD5Q99666 1765 aa8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 ERBB3P21860 1342 aa8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 WDR33Q9C0J8 1336 aaKnown RBP8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 SBF1O95248 1867 aa8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 BRCA1P38398 1863 aaKnown RBP8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 MMP10P09238 476 aa8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 DEFB115Q30KQ5 88 aa8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 SLC17A8Q8NDX2 589 aa8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
SCARNA21.2-201ENST00000516600 PASKQ96RG2 1323 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 PITPNM2Q9BZ72 1349 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 RASSF10A6NK89 507 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 NLRP2Q9NX02 1062 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 PIM2Q9P1W9 311 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 TSKSQ9UJT2 592 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 NSD2O96028 1365 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
SCARNA21.2-201ENST00000516600 LMNB1P20700 586 aa8.56□□□□□ -1.04
SCARNA21.2-201ENST00000516600 FXR1P51114 621 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCARNA21.2-201ENST00000516600 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
SCARNA21.2-201ENST00000516600 CCDC87Q9NVE4 849 aa8.56□□□□□ -1.04
SCARNA21.2-201ENST00000516600 POTECB2RU33 542 aa8.55□□□□□ -1.04
SCARNA21.2-201ENST00000516600 RASSF7Q02833 373 aa8.55□□□□□ -1.04
SCARNA21.2-201ENST00000516600 ARHGEF25Q86VW2 580 aa8.55□□□□□ -1.04
SCARNA21.2-201ENST00000516600 CCDC61Q9Y6R9 512 aa8.55□□□□□ -1.04
SCARNA21.2-201ENST00000516600 C4BP0C0L5 1744 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 CASP8AP2Q9UKL3 1982 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 SOX12O15370 315 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 POTEIP0CG38 1075 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 SSFA2P28290 1259 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 AMIGO3Q86WK7 504 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 ABT1Q9ULW3 272 aaKnown RBP8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 TIAM2Q8IVF5 1701 aa8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 KDM6AO15550 1401 aaPredicted RBP8.54□□□□□ -1.04
SCARNA21.2-201ENST00000516600 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
SCARNA21.2-201ENST00000516600 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
SCARNA21.2-201ENST00000516600 KCNA3P22001 575 aa8.53□□□□□ -1.04
SCARNA21.2-201ENST00000516600 GRM1Q13255 1194 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 260.9 ms