RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 OVOL3O00110 214 aa1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 ECM2O94769 699 aaPredicted RBP1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 FSHRP23945 695 aa1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 RELBQ01201 579 aa1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 C4orf48Q5BLP8 95 aa1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 LYSMD3Q7Z3D4 306 aa1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 CFHR5Q9BXR6 569 aa1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 ZNF395Q9H8N7 513 aaPredicted RBP1.8□□□□□ -2.12
RNU6-542P-201ENST00000516405 H7C1W4 665 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 CCNYL3P0C7X3 344 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 KRTAP5-9P26371 169 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 PTGDRQ13258 359 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 GRIPAP1Q4V328 841 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 PRRT3Q5FWE3 981 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 GGNQ86UU5 652 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 HS6ST3Q8IZP7 471 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 SYMPKQ92797 1274 aaKnown RBP1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 EVA1BQ9NVM1 165 aa1.79□□□□□ -2.12
RNU6-542P-201ENST00000516405 SUV39H1O43463 412 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 SELPP16109 830 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 KRTAP10-2P60368 255 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 DBX2Q6ZNG2 339 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 TTLL10Q6ZVT0 673 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 PRICKLE2Q7Z3G6 844 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 TXNRD3Q86VQ6 643 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 CILP2Q8IUL8 1156 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 CCDC116Q8IYX3 515 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 ASIC4Q96FT7 647 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 NACC1Q96RE7 527 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 TMPRSS5Q9H3S3 457 aa1.78□□□□□ -2.12
RNU6-542P-201ENST00000516405 NEURL1BA8MQ27 555 aa1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 IGHA2P01877 340 aa1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 SPINK2P20155 84 aa1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 KCNH2Q12809 1159 aa1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 PPP1R26Q5T8A7 1209 aaPredicted RBP1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 LCNL1Q6ZST4 164 aa1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 PAXIP1Q6ZW49 1069 aaPredicted RBP1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 GAS2L1Q99501 681 aaPredicted RBP1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 NUCKS1Q9H1E3 243 aaKnown RBP1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 DAXXQ9UER7 740 aaPredicted RBP1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 DYRK1BQ9Y463 629 aa1.77□□□□□ -2.13
RNU6-542P-201ENST00000516405 C9orf172C9J069 976 aa1.76□□□□□ -2.13
RNU6-542P-201ENST00000516405 CTBSQ01459 385 aa1.76□□□□□ -2.13
RNU6-542P-201ENST00000516405 UBAP2LQ14157 1087 aaKnown RBP1.76□□□□□ -2.13
RNU6-542P-201ENST00000516405 ABI1Q8IZP0 508 aa1.76□□□□□ -2.13
RNU6-542P-201ENST00000516405 KLF15Q9UIH9 416 aa1.76□□□□□ -2.13
RNU6-542P-201ENST00000516405 TGFB1P01137 390 aa1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 BMP4P12644 408 aa1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 FSTP19883 344 aa1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 METTL3Q86U44 580 aaKnown RBP1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 FCHSD1Q86WN1 690 aa1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 KDF1Q8NAX2 398 aaPredicted RBP1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 RYDENQ9NUL5 291 aaKnown RBP1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 LMCD1Q9NZU5 365 aa1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 RAPGEFL1Q9UHV5 662 aa1.75□□□□□ -2.13
RNU6-542P-201ENST00000516405 SPDYE3A6NKU9 549 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 ARAFP10398 606 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 ITGB5P18084 799 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 CFPP27918 469 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 GUCA2AQ02747 115 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 TRIM28Q13263 835 aaKnown RBP1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 SHISA2Q6UWI4 295 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 PRR23CQ6ZRP0 262 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 CBLL1Q75N03 491 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 NLRP7Q8WX94 980 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 DNAJC5Q9H3Z4 198 aa1.74□□□□□ -2.13
RNU6-542P-201ENST00000516405 WNT11O96014 354 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 OATP04181 439 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 MS4A1P11836 297 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 ECM1Q16610 540 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 PTPRNQ16849 979 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 VASH1Q7L8A9 365 aaPredicted RBP1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 SLC51AQ86UW1 340 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 DTX1Q86Y01 620 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 C1QL4Q86Z23 238 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 LENG1Q96BZ8 264 aaPredicted RBP1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 PGPEP1Q9NXJ5 209 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 MAP4K5Q9Y4K4 846 aa1.73□□□□□ -2.13
RNU6-542P-201ENST00000516405 RNF144AP50876 292 aaPredicted RBP1.72□□□□□ -2.13
RNU6-542P-201ENST00000516405 KRTAP5-4Q6L8H1 288 aa1.72□□□□□ -2.13
RNU6-542P-201ENST00000516405 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
RNU6-542P-201ENST00000516405 C1QTNF2Q9BXJ5 285 aa1.72□□□□□ -2.13
RNU6-542P-201ENST00000516405 ACSS3Q9H6R3 686 aa1.72□□□□□ -2.13
RNU6-542P-201ENST00000516405 KDM2AQ9Y2K7 1162 aa1.72□□□□□ -2.13
RNU6-542P-201ENST00000516405 GTPBP6O43824 516 aaPredicted RBP1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 PTGIRP43119 386 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 POU4F2Q12837 409 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 RETREG3Q86VR2 466 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 ABHD17AQ96GS6 310 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 C20orf173Q96LM9 149 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 PHF24Q9UPV7 400 aa1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.71□□□□□ -2.14
RNU6-542P-201ENST00000516405 F11P03951 625 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 JUNBP17275 347 aaPredicted RBP1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 FGFR3P22607 806 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 CTSWP56202 376 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 PKD2Q13563 968 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 COL19A1Q14993 1142 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 C8orf86Q6ZUL3 223 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms