RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
NR1I3-234ENST00000515621 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
NR1I3-234ENST00000515621 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
NR1I3-234ENST00000515621 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
NR1I3-234ENST00000515621 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-234ENST00000515621 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 GNAI1P63096 354 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
NR1I3-234ENST00000515621 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 LRRC37A3O60309 1634 aa11.81□□□□□ -0.52
NR1I3-234ENST00000515621 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
NR1I3-234ENST00000515621 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-234ENST00000515621 PRDM11Q9NQV5 511 aa11.8□□□□□ -0.52
NR1I3-234ENST00000515621 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
NR1I3-234ENST00000515621 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-234ENST00000515621 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
NR1I3-234ENST00000515621 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
NR1I3-234ENST00000515621 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
NR1I3-234ENST00000515621 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
NR1I3-234ENST00000515621 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-234ENST00000515621 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
NR1I3-234ENST00000515621 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
NR1I3-234ENST00000515621 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-234ENST00000515621 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NR1I3-234ENST00000515621 PLEKHO1Q53GL0 409 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-234ENST00000515621 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
NR1I3-234ENST00000515621 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
NR1I3-234ENST00000515621 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
NR1I3-234ENST00000515621 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
NR1I3-234ENST00000515621 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
NR1I3-234ENST00000515621 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
NR1I3-234ENST00000515621 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
NR1I3-234ENST00000515621 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
NR1I3-234ENST00000515621 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
NR1I3-234ENST00000515621 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
NR1I3-234ENST00000515621 CRB1P82279 1406 aa11.76□□□□□ -0.53
NR1I3-234ENST00000515621 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
NR1I3-234ENST00000515621 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
NR1I3-234ENST00000515621 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
NR1I3-234ENST00000515621 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
NR1I3-234ENST00000515621 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
NR1I3-234ENST00000515621 JCADQ9P266 1359 aa11.75□□□□□ -0.53
NR1I3-234ENST00000515621 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
NR1I3-234ENST00000515621 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
NR1I3-234ENST00000515621 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
NR1I3-234ENST00000515621 CHL1O00533 1208 aa11.74□□□□□ -0.53
NR1I3-234ENST00000515621 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-234ENST00000515621 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-234ENST00000515621 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
NR1I3-234ENST00000515621 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-234ENST00000515621 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
NR1I3-234ENST00000515621 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
NR1I3-234ENST00000515621 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
NR1I3-234ENST00000515621 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
NR1I3-234ENST00000515621 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
NR1I3-234ENST00000515621 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
NR1I3-234ENST00000515621 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
NR1I3-234ENST00000515621 MEGF6O75095 1541 aa11.71□□□□□ -0.53
NR1I3-234ENST00000515621 MRC1P22897 1456 aa11.71□□□□□ -0.53
NR1I3-234ENST00000515621 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NR1I3-234ENST00000515621 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
NR1I3-234ENST00000515621 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
NR1I3-234ENST00000515621 AAMPQ13685 434 aa11.71□□□□□ -0.53
NR1I3-234ENST00000515621 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-234ENST00000515621 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NR1I3-234ENST00000515621 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NR1I3-234ENST00000515621 MS4A1P11836 297 aa11.7□□□□□ -0.54
NR1I3-234ENST00000515621 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
NR1I3-234ENST00000515621 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-234ENST00000515621 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
NR1I3-234ENST00000515621 SLIT2O94813 1529 aa11.7□□□□□ -0.54
NR1I3-234ENST00000515621 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
NR1I3-234ENST00000515621 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
NR1I3-234ENST00000515621 HOXB7P09629 217 aa11.69□□□□□ -0.54
NR1I3-234ENST00000515621 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
NR1I3-234ENST00000515621 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
NR1I3-234ENST00000515621 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-234ENST00000515621 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
NR1I3-234ENST00000515621 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
NR1I3-234ENST00000515621 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
NR1I3-234ENST00000515621 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
NR1I3-234ENST00000515621 MCM10Q7L590 875 aa11.68□□□□□ -0.54
NR1I3-234ENST00000515621 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
NR1I3-234ENST00000515621 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
NR1I3-234ENST00000515621 NRAPQ86VF7 1730 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms