RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.94
PAPD4-216ENST00000515298 UCN2Q96RP3 112 aa9.15□□□□□ -0.94
PAPD4-216ENST00000515298 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
PAPD4-216ENST00000515298 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
PAPD4-216ENST00000515298 SKIP12755 728 aa9.13□□□□□ -0.95
PAPD4-216ENST00000515298 USP4Q13107 963 aa9.13□□□□□ -0.95
PAPD4-216ENST00000515298 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
PAPD4-216ENST00000515298 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
PAPD4-216ENST00000515298 SOS2Q07890 1332 aaPredicted RBP9.12□□□□□ -0.95
PAPD4-216ENST00000515298 CYP2U1Q7Z449 544 aa9.12□□□□□ -0.95
PAPD4-216ENST00000515298 ESF1Q9H501 851 aaKnown RBP9.12□□□□□ -0.95
PAPD4-216ENST00000515298 ZNF777Q9ULD5 760 aaPredicted RBP9.12□□□□□ -0.95
PAPD4-216ENST00000515298 TBC1D9Q6ZT07 1266 aa9.11□□□□□ -0.95
PAPD4-216ENST00000515298 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
PAPD4-216ENST00000515298 INSM2Q96T92 566 aaPredicted RBP9.11□□□□□ -0.95
PAPD4-216ENST00000515298 CTSOP43234 321 aaPredicted RBP9.1□□□□□ -0.95
PAPD4-216ENST00000515298 SIRT1Q96EB6 747 aa9.1□□□□□ -0.95
PAPD4-216ENST00000515298 A0A1W2PRU2 124 aa9.09□□□□□ -0.95
PAPD4-216ENST00000515298 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
PAPD4-216ENST00000515298 USP17L5A8MUK1 530 aa9.09□□□□□ -0.95
PAPD4-216ENST00000515298 ATP9BO43861 1147 aa9.09□□□□□ -0.95
PAPD4-216ENST00000515298 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
PAPD4-216ENST00000515298 DNMT3LQ9UJW3 386 aa9.09□□□□□ -0.95
PAPD4-216ENST00000515298 SOBPA7XYQ1 873 aa9.08□□□□□ -0.96
PAPD4-216ENST00000515298 GNRH1P01148 92 aa9.08□□□□□ -0.96
PAPD4-216ENST00000515298 NCOA4Q13772 614 aa9.08□□□□□ -0.96
PAPD4-216ENST00000515298 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
PAPD4-216ENST00000515298 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
PAPD4-216ENST00000515298 MAN1A2O60476 641 aa9.07□□□□□ -0.96
PAPD4-216ENST00000515298 EML3Q32P44 896 aa9.07□□□□□ -0.96
PAPD4-216ENST00000515298 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
PAPD4-216ENST00000515298 PLEKHM2Q8IWE5 1019 aa9.07□□□□□ -0.96
PAPD4-216ENST00000515298 DEPDC4Q8N2C3 294 aa9.07□□□□□ -0.96
PAPD4-216ENST00000515298 ARHGEF10LQ9HCE6 1279 aa9.07□□□□□ -0.96
PAPD4-216ENST00000515298 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
PAPD4-216ENST00000515298 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
PAPD4-216ENST00000515298 CLN3Q13286 438 aa9.06□□□□□ -0.96
PAPD4-216ENST00000515298 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
PAPD4-216ENST00000515298 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
PAPD4-216ENST00000515298 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
PAPD4-216ENST00000515298 TFIP11Q9UBB9 837 aaKnown RBP9.06□□□□□ -0.96
PAPD4-216ENST00000515298 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
PAPD4-216ENST00000515298 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
PAPD4-216ENST00000515298 MEN1O00255 615 aa9.05□□□□□ -0.96
PAPD4-216ENST00000515298 RNF144AP50876 292 aaPredicted RBP9.05□□□□□ -0.96
PAPD4-216ENST00000515298 PPP1R12CQ9BZL4 782 aa9.05□□□□□ -0.96
PAPD4-216ENST00000515298 RAB6BQ9NRW1 208 aa9.05□□□□□ -0.96
PAPD4-216ENST00000515298 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
PAPD4-216ENST00000515298 PCDHGA11Q9Y5H2 935 aa9.05□□□□□ -0.96
PAPD4-216ENST00000515298 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
PAPD4-216ENST00000515298 IL2RAP01589 272 aa9.04□□□□□ -0.96
PAPD4-216ENST00000515298 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.96
PAPD4-216ENST00000515298 XAGE2Q96GT9 111 aa9.04□□□□□ -0.96
PAPD4-216ENST00000515298 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
PAPD4-216ENST00000515298 MAFBQ9Y5Q3 323 aaPredicted RBP9.04□□□□□ -0.96
PAPD4-216ENST00000515298 GPC1P35052 558 aa9.03□□□□□ -0.96
PAPD4-216ENST00000515298 ZNF775Q96BV0 537 aaPredicted RBP9.03□□□□□ -0.96
PAPD4-216ENST00000515298 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
PAPD4-216ENST00000515298 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
PAPD4-216ENST00000515298 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
PAPD4-216ENST00000515298 SCNN1DP51172 638 aa9.02□□□□□ -0.97
PAPD4-216ENST00000515298 ESCO1Q5FWF5 840 aa9.02□□□□□ -0.97
PAPD4-216ENST00000515298 CNKSR1Q969H4 720 aa9.02□□□□□ -0.97
PAPD4-216ENST00000515298 GTF2IP78347 998 aa9.01□□□□□ -0.97
PAPD4-216ENST00000515298 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
PAPD4-216ENST00000515298 WASLO00401 505 aaPredicted RBP9□□□□□ -0.97
PAPD4-216ENST00000515298 INHAP05111 366 aa9□□□□□ -0.97
PAPD4-216ENST00000515298 GDF10P55107 478 aa9□□□□□ -0.97
PAPD4-216ENST00000515298 CENPCQ03188 943 aa9□□□□□ -0.97
PAPD4-216ENST00000515298 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
PAPD4-216ENST00000515298 TRIM50Q86XT4 487 aa9□□□□□ -0.97
PAPD4-216ENST00000515298 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
PAPD4-216ENST00000515298 MKRN1Q9UHC7 482 aaKnown RBP9□□□□□ -0.97
PAPD4-216ENST00000515298 TMEM229AB2RXF0 380 aa8.99□□□□□ -0.97
PAPD4-216ENST00000515298 CLDN10P78369 228 aa8.99□□□□□ -0.97
PAPD4-216ENST00000515298 CFAP70Q5T0N1 1121 aa8.99□□□□□ -0.97
PAPD4-216ENST00000515298 PRICKLE2Q7Z3G6 844 aa8.99□□□□□ -0.97
PAPD4-216ENST00000515298 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
PAPD4-216ENST00000515298 TERTO14746 1132 aaKnown RBP8.98□□□□□ -0.97
PAPD4-216ENST00000515298 ZBTB7BO15156 539 aaPredicted RBP8.98□□□□□ -0.97
PAPD4-216ENST00000515298 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
PAPD4-216ENST00000515298 PTSQ03393 145 aa8.98□□□□□ -0.97
PAPD4-216ENST00000515298 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
PAPD4-216ENST00000515298 ERICH6Q7L0X2 663 aa8.98□□□□□ -0.97
PAPD4-216ENST00000515298 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
PAPD4-216ENST00000515298 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
PAPD4-216ENST00000515298 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
PAPD4-216ENST00000515298 KIAA1024Q9UPX6 916 aa8.97□□□□□ -0.97
PAPD4-216ENST00000515298 SLC35F4A4IF30 521 aa8.96□□□□□ -0.98
PAPD4-216ENST00000515298 SPATA31C2B4DYI2 1134 aa8.96□□□□□ -0.98
PAPD4-216ENST00000515298 PSME1Q06323 249 aa8.96□□□□□ -0.98
PAPD4-216ENST00000515298 NFX1Q12986 1120 aaKnown RBP8.96□□□□□ -0.98
PAPD4-216ENST00000515298 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.98
PAPD4-216ENST00000515298 OGFOD1Q8N543 542 aa8.96□□□□□ -0.98
PAPD4-216ENST00000515298 SLC4A9Q96Q91 983 aa8.96□□□□□ -0.98
PAPD4-216ENST00000515298 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
PAPD4-216ENST00000515298 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
PAPD4-216ENST00000515298 RHOQP17081 205 aa8.95□□□□□ -0.98
PAPD4-216ENST00000515298 POU4F2Q12837 409 aa8.95□□□□□ -0.98
PAPD4-216ENST00000515298 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms