RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
PAPD4-216ENST00000515298 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
PAPD4-216ENST00000515298 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
PAPD4-216ENST00000515298 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
PAPD4-216ENST00000515298 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
PAPD4-216ENST00000515298 FOXD1Q16676 465 aa19.83■□□□□ 0.77
PAPD4-216ENST00000515298 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
PAPD4-216ENST00000515298 ADRA2BP18089 450 aa19.01■□□□□ 0.63
PAPD4-216ENST00000515298 PIAS4Q8N2W9 510 aaPredicted RBP18.66■□□□□ 0.58
PAPD4-216ENST00000515298 MSH5O43196 834 aa18.29■□□□□ 0.52
PAPD4-216ENST00000515298 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
PAPD4-216ENST00000515298 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
PAPD4-216ENST00000515298 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
PAPD4-216ENST00000515298 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
PAPD4-216ENST00000515298 KCNA4P22459 653 aa17.03■□□□□ 0.32
PAPD4-216ENST00000515298 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
PAPD4-216ENST00000515298 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
PAPD4-216ENST00000515298 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
PAPD4-216ENST00000515298 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
PAPD4-216ENST00000515298 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
PAPD4-216ENST00000515298 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
PAPD4-216ENST00000515298 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
PAPD4-216ENST00000515298 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
PAPD4-216ENST00000515298 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
PAPD4-216ENST00000515298 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
PAPD4-216ENST00000515298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
PAPD4-216ENST00000515298 ZBTB22O15209 634 aa15.69■□□□□ 0.1
PAPD4-216ENST00000515298 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
PAPD4-216ENST00000515298 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
PAPD4-216ENST00000515298 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
PAPD4-216ENST00000515298 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
PAPD4-216ENST00000515298 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
PAPD4-216ENST00000515298 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
PAPD4-216ENST00000515298 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
PAPD4-216ENST00000515298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
PAPD4-216ENST00000515298 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
PAPD4-216ENST00000515298 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
PAPD4-216ENST00000515298 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
PAPD4-216ENST00000515298 APLP2Q06481 763 aa15.22■□□□□ 0.03
PAPD4-216ENST00000515298 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
PAPD4-216ENST00000515298 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
PAPD4-216ENST00000515298 CAPN15O75808 1086 aa15.11■□□□□ 0.01
PAPD4-216ENST00000515298 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
PAPD4-216ENST00000515298 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
PAPD4-216ENST00000515298 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
PAPD4-216ENST00000515298 DSG3P32926 999 aa14.9□□□□□ -0.02
PAPD4-216ENST00000515298 ABCB7O75027 752 aa14.83□□□□□ -0.04
PAPD4-216ENST00000515298 POLA2Q14181 598 aa14.79□□□□□ -0.04
PAPD4-216ENST00000515298 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
PAPD4-216ENST00000515298 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
PAPD4-216ENST00000515298 FBLN2P98095 1184 aa14.43□□□□□ -0.1
PAPD4-216ENST00000515298 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
PAPD4-216ENST00000515298 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
PAPD4-216ENST00000515298 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
PAPD4-216ENST00000515298 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
PAPD4-216ENST00000515298 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
PAPD4-216ENST00000515298 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
PAPD4-216ENST00000515298 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
PAPD4-216ENST00000515298 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
PAPD4-216ENST00000515298 FKBP8Q14318 412 aa14.02□□□□□ -0.17
PAPD4-216ENST00000515298 AKT1S1Q96B36 256 aa14□□□□□ -0.17
PAPD4-216ENST00000515298 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
PAPD4-216ENST00000515298 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
PAPD4-216ENST00000515298 PROM2Q8N271 834 aa13.87□□□□□ -0.19
PAPD4-216ENST00000515298 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
PAPD4-216ENST00000515298 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
PAPD4-216ENST00000515298 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
PAPD4-216ENST00000515298 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
PAPD4-216ENST00000515298 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
PAPD4-216ENST00000515298 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
PAPD4-216ENST00000515298 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
PAPD4-216ENST00000515298 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
PAPD4-216ENST00000515298 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
PAPD4-216ENST00000515298 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
PAPD4-216ENST00000515298 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
PAPD4-216ENST00000515298 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
PAPD4-216ENST00000515298 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
PAPD4-216ENST00000515298 MIER1Q8N108 512 aa13.34□□□□□ -0.27
PAPD4-216ENST00000515298 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
PAPD4-216ENST00000515298 POTEHQ6S545 545 aa13.26□□□□□ -0.29
PAPD4-216ENST00000515298 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
PAPD4-216ENST00000515298 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
PAPD4-216ENST00000515298 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
PAPD4-216ENST00000515298 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
PAPD4-216ENST00000515298 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
PAPD4-216ENST00000515298 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
PAPD4-216ENST00000515298 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
PAPD4-216ENST00000515298 NUBP1P53384 320 aa13.04□□□□□ -0.32
PAPD4-216ENST00000515298 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
PAPD4-216ENST00000515298 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
PAPD4-216ENST00000515298 HAX1O00165 279 aa13□□□□□ -0.33
PAPD4-216ENST00000515298 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
PAPD4-216ENST00000515298 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
PAPD4-216ENST00000515298 EVX2Q03828 476 aa12.93□□□□□ -0.34
PAPD4-216ENST00000515298 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
PAPD4-216ENST00000515298 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
PAPD4-216ENST00000515298 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
PAPD4-216ENST00000515298 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
PAPD4-216ENST00000515298 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
PAPD4-216ENST00000515298 GSE1Q14687 1217 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms