RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, humanhuman

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-222ENST00000515159 SIGLEC1Q9BZZ2 1709 aa5.59□□□□□ -1.51
SLC38A9-222ENST00000515159 ATP10DQ9P241 1426 aa5.59□□□□□ -1.52
SLC38A9-222ENST00000515159 ZRANB2O95218 330 aaKnown RBP eCLIP5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 XPCQ01831 940 aaPredicted RBP5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 MSL3Q8N5Y2 521 aaKnown RBP5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 KDRP35968 1356 aa5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 RLBP1P12271 317 aa5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 TULP4Q9NRJ4 1543 aa5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 CPSF1Q10570 1443 aaKnown RBP5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 CDCA8Q53HL2 280 aa5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 TMEM63CQ9P1W3 806 aa5.58□□□□□ -1.52
SLC38A9-222ENST00000515159 TDRD9Q8NDG6 1382 aaKnown RBP5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 CCDC93Q567U6 631 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 AXDND1Q5T1B0 1012 aaPredicted RBP5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 OSCARQ8IYS5 282 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 R3HCC1Q9Y3T6 440 aaKnown RBP5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 FER1L4A9Z1Z3 1794 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 FMN2Q9NZ56 1722 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 KIF24Q5T7B8 1368 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 PRIM1P49642 420 aaKnown RBP5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 PKD2Q13563 968 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 UVSSAQ2YD98 709 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 NBPF20Q3BBV1 942 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 EGFL6Q8IUX8 553 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 SUGP1Q8IWZ8 645 aaKnown RBP5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 TSPYL1Q9H0U9 437 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 ABCC1P33527 1531 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 TOPAZ1Q8N9V7 1692 aa5.57□□□□□ -1.52
SLC38A9-222ENST00000515159 RIMS1Q86UR5 1692 aaKnown RBP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 ZFYVE16Q7Z3T8 1539 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 RBM43Q6ZSC3 357 aaKnown RBP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 ZNF622Q969S3 477 aaKnown RBP eCLIP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 NSFL1CQ9UNZ2 370 aaKnown RBP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 C3P01024 1663 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 NPHP4O75161 1426 aaPredicted RBP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 PPP2R1AP30153 589 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 IRX3P78415 501 aaPredicted RBP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 NYAP1Q6ZVC0 841 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 BRMS1Q9HCU9 246 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 POLKQ9UBT6 870 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 ADAMTS8Q9UP79 889 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 ANP32BQ92688 251 aaKnown RBP5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 C22orf23Q9BZE7 217 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 USP25Q9UHP3 1055 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 FHOD1Q9Y613 1164 aa5.56□□□□□ -1.52
SLC38A9-222ENST00000515159 VGLL3A8MV65 326 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 RARSP54136 660 aaKnown RBP5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 NUCB1Q02818 461 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 CUL4AQ13619 759 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 CT47A1Q5JQC4 288 aaPredicted RBP5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 GAS2L2Q8NHY3 880 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 CHMP4AQ9BY43 222 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 FAM13BQ9NYF5 915 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 PSD3Q9NYI0 1048 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 PDZRN3Q9UPQ7 1066 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 GUCY2CP25092 1073 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 BMP2KLQ5H9B9 411 aa5.55□□□□□ -1.52
SLC38A9-222ENST00000515159 C21orf2O43822 256 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 SALL3Q9BXA9 1300 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 RAD51AP2Q09MP3 1159 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 L2HGDHQ9H9P8 463 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 TTC21BQ7Z4L5 1316 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 KIAA0232Q92628 1395 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 C4AP0C0L4 1744 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 C4BP0C0L5 1744 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 SPDYE2BA6NHP3 402 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 BCAR3O75815 825 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 SPDYE6P0CI01 402 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 U2AF2P26368 475 aaKnown RBP eCLIP5.54□□□□□ -1.523e-6■□□□□ 9.1
SLC38A9-222ENST00000515159 NOLC1Q14978 699 aaKnown RBP eCLIP5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 SPDYE2Q495Y8 402 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 REXO1L1PQ8IX06 675 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 MKL1Q969V6 931 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 USP26Q9BXU7 913 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 FAM135BQ49AJ0 1406 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 PEAK1Q9H792 1746 aa5.54□□□□□ -1.52
SLC38A9-222ENST00000515159 E9PSI1 815 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 DHX16O60231 1041 aaKnown RBP5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 PNPLA6Q8IY17 1366 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 XAGE2Q96GT9 111 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 NCAPGQ9BPX3 1015 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 SLX1AQ9BQ83 275 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 MLH3Q9UHC1 1453 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 CLGNO14967 610 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 PRR29P0C7W0 189 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 GOLGA2Q08379 1002 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 RPAINQ86UA6 219 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 BSDC1Q9NW68 430 aaPredicted RBP5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 KIF3AQ9Y496 699 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 CEMIPQ8WUJ3 1361 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 K7ELQ4 463 aaPredicted RBP5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 CT47B1P0C2W7 299 aaPredicted RBP5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 SSFA2P28290 1259 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 KMT5BQ4FZB7 885 aa5.53□□□□□ -1.52
SLC38A9-222ENST00000515159 PMFBP1Q8TBY8 1022 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms