RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 CALD1Q05682 793 aaKnown RBP8.63□□□□□ -1.03
CPNE4-212ENST00000514999 MTERF4Q7Z6M4 381 aaKnown RBP8.63□□□□□ -1.03
CPNE4-212ENST00000514999 ANKLE2Q86XL3 938 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 ZNF516Q92618 1163 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 SAMD9LQ8IVG5 1584 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 CPS1P31327 1500 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 SHANK2Q9UPX8 1470 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 CDC42BPAQ5VT25 1732 aa8.63□□□□□ -1.03
CPNE4-212ENST00000514999 CGNL1Q0VF96 1302 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 E2F4Q16254 413 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.62□□□□□ -1.03
CPNE4-212ENST00000514999 POGKQ9P215 609 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 SYCP2Q9BX26 1530 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 A2MP01023 1474 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 PZPP20742 1482 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 ABCC5O15440 1437 aa8.62□□□□□ -1.03
CPNE4-212ENST00000514999 ATP7AQ04656 1500 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 OSBPP22059 807 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 APLP1P51693 650 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 ANP32BQ92688 251 aaKnown RBP8.61□□□□□ -1.03
CPNE4-212ENST00000514999 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
CPNE4-212ENST00000514999 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 ADGRL2O95490 1459 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 CAMSAP2Q08AD1 1489 aa8.61□□□□□ -1.03
CPNE4-212ENST00000514999 ADGBQ8N7X0 1667 aa8.6□□□□□ -1.03
CPNE4-212ENST00000514999 ESPNB1AK53 854 aa8.6□□□□□ -1.03
CPNE4-212ENST00000514999 SKOR2Q2VWA4 1001 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-212ENST00000514999 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-212ENST00000514999 CDHR5Q9HBB8 845 aa8.6□□□□□ -1.03
CPNE4-212ENST00000514999 PODXL2Q9NZ53 605 aa8.6□□□□□ -1.03
CPNE4-212ENST00000514999 CHMP5Q9NZZ3 219 aa8.6□□□□□ -1.03
CPNE4-212ENST00000514999 CFDP1Q9UEE9 299 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-212ENST00000514999 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
CPNE4-212ENST00000514999 XRCC6P12956 609 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPNE4-212ENST00000514999 MCM4P33991 863 aa8.59□□□□□ -1.03
CPNE4-212ENST00000514999 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
CPNE4-212ENST00000514999 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPNE4-212ENST00000514999 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-212ENST00000514999 THEMISQ8N1K5 641 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-212ENST00000514999 TNRQ92752 1358 aa8.59□□□□□ -1.03
CPNE4-212ENST00000514999 LAMC1P11047 1609 aa8.58□□□□□ -1.04
CPNE4-212ENST00000514999 PLIN1O60240 522 aa8.58□□□□□ -1.04
CPNE4-212ENST00000514999 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
CPNE4-212ENST00000514999 PDE3AQ14432 1141 aa8.58□□□□□ -1.04
CPNE4-212ENST00000514999 TTC13Q8NBP0 860 aa8.58□□□□□ -1.04
CPNE4-212ENST00000514999 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
CPNE4-212ENST00000514999 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
CPNE4-212ENST00000514999 KIF3BO15066 747 aa8.57□□□□□ -1.04
CPNE4-212ENST00000514999 RNF40O75150 1001 aa8.57□□□□□ -1.04
CPNE4-212ENST00000514999 RGS3P49796 1198 aa8.57□□□□□ -1.04
CPNE4-212ENST00000514999 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-212ENST00000514999 ZNF326Q5BKZ1 582 aaKnown RBP8.57□□□□□ -1.04
CPNE4-212ENST00000514999 SPRYD3Q8NCJ5 442 aa8.57□□□□□ -1.04
CPNE4-212ENST00000514999 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
CPNE4-212ENST00000514999 KDM5DQ9BY66 1539 aa8.57□□□□□ -1.04
CPNE4-212ENST00000514999 NEURL4Q96JN8 1562 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 NPHP4O75161 1426 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-212ENST00000514999 GPATCH8Q9UKJ3 1502 aaKnown RBP8.56□□□□□ -1.04
CPNE4-212ENST00000514999 CCDC173Q0VFZ6 552 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 TBC1D32Q96NH3 1257 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 GBP4Q96PP9 640 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 GRPEL1Q9HAV7 217 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 NPDC1Q9NQX5 325 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-212ENST00000514999 RGS17Q9UGC6 210 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-212ENST00000514999 PLXNC1O60486 1568 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 VWDEQ8N2E2 1590 aa8.56□□□□□ -1.04
CPNE4-212ENST00000514999 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-212ENST00000514999 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
CPNE4-212ENST00000514999 TRAK2O60296 914 aa8.55□□□□□ -1.04
CPNE4-212ENST00000514999 DUSP27Q5VZP5 1158 aa8.55□□□□□ -1.04
CPNE4-212ENST00000514999 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
CPNE4-212ENST00000514999 NKTRP30414 1462 aaKnown RBP8.55□□□□□ -1.04
CPNE4-212ENST00000514999 FAM135AQ9P2D6 1515 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 EIF2AK4Q9P2K8 1649 aaKnown RBP8.54□□□□□ -1.04
CPNE4-212ENST00000514999 UGGT1Q9NYU2 1555 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 GPRASP1Q5JY77 1395 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 E9PSI1 815 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 HS1BP3Q53T59 392 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 SWT1Q5T5J6 900 aaKnown RBP8.54□□□□□ -1.04
CPNE4-212ENST00000514999 HSCBQ8IWL3 235 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 SLKQ9H2G2 1235 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-212ENST00000514999 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
CPNE4-212ENST00000514999 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-212ENST00000514999 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 TMF1P82094 1093 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 USP19O94966 1318 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 ZNF521Q96K83 1311 aa8.53□□□□□ -1.04
CPNE4-212ENST00000514999 RNF17Q9BXT8 1623 aaKnown RBP8.52□□□□□ -1.05
CPNE4-212ENST00000514999 GOLGA6L22H0YM25 854 aa8.52□□□□□ -1.05
CPNE4-212ENST00000514999 MSNP26038 577 aaKnown RBP8.52□□□□□ -1.05
CPNE4-212ENST00000514999 GGCXP38435 758 aa8.52□□□□□ -1.05
CPNE4-212ENST00000514999 COPS2P61201 443 aa8.52□□□□□ -1.05
CPNE4-212ENST00000514999 SLFN5Q08AF3 891 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms