RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 FLT4P35916 1363 aa22.25■■□□□ 1.15
SNCAIP-220ENST00000514497 RRS1Q15050 365 aaKnown RBP22.25■■□□□ 1.15
SNCAIP-220ENST00000514497 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
SNCAIP-220ENST00000514497 AMPHP49418 695 aa22.23■■□□□ 1.15
SNCAIP-220ENST00000514497 LMO7Q8WWI1 1683 aa22.23■■□□□ 1.15
SNCAIP-220ENST00000514497 IP6K1Q92551 441 aa22.22■■□□□ 1.15
SNCAIP-220ENST00000514497 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 SOX12O15370 315 aa22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 FBLN1P23142 703 aa22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 PROM2Q8N271 834 aa22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 MTFR1LQ9H019 292 aa22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 STK32BQ9NY57 414 aa22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 COL3A1P02461 1466 aaPredicted RBP22.21■■□□□ 1.15
SNCAIP-220ENST00000514497 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
SNCAIP-220ENST00000514497 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
SNCAIP-220ENST00000514497 COL18A1P39060 1754 aa22.2■■□□□ 1.14
SNCAIP-220ENST00000514497 HOXC9P31274 260 aa22.19■■□□□ 1.14
SNCAIP-220ENST00000514497 CCDC184Q52MB2 194 aa22.19■■□□□ 1.14
SNCAIP-220ENST00000514497 PTF1AQ7RTS3 328 aa22.19■■□□□ 1.14
SNCAIP-220ENST00000514497 LRRC37A3O60309 1634 aa22.19■■□□□ 1.14
SNCAIP-220ENST00000514497 GPR162Q16538 588 aa22.18■■□□□ 1.14
SNCAIP-220ENST00000514497 SGIP1Q9BQI5 828 aa22.18■■□□□ 1.14
SNCAIP-220ENST00000514497 SLC15A2Q16348 729 aa22.17■■□□□ 1.14
SNCAIP-220ENST00000514497 ARXQ96QS3 562 aa22.17■■□□□ 1.14
SNCAIP-220ENST00000514497 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
SNCAIP-220ENST00000514497 FAM208AQ9UK61 1670 aaKnown RBP22.15■■□□□ 1.14
SNCAIP-220ENST00000514497 DDB1Q16531 1140 aa22.15■■□□□ 1.14
SNCAIP-220ENST00000514497 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
SNCAIP-220ENST00000514497 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
SNCAIP-220ENST00000514497 IL13P35225 146 aa22.14■■□□□ 1.13
SNCAIP-220ENST00000514497 TXNRD1Q16881 649 aa22.14■■□□□ 1.13
SNCAIP-220ENST00000514497 HSP90AB2PQ58FF8 381 aa22.14■■□□□ 1.13
SNCAIP-220ENST00000514497 CRB1P82279 1406 aa22.14■■□□□ 1.13
SNCAIP-220ENST00000514497 MAP3K5Q99683 1374 aa22.13■■□□□ 1.13
SNCAIP-220ENST00000514497 SHANK3Q9BYB0 1731 aa22.13■■□□□ 1.13
SNCAIP-220ENST00000514497 PNNQ9H307 717 aaKnown RBP22.12■■□□□ 1.13
SNCAIP-220ENST00000514497 EIF4A2Q14240 407 aaKnown RBP22.11■■□□□ 1.13
SNCAIP-220ENST00000514497 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
SNCAIP-220ENST00000514497 WNK3Q9BYP7 1800 aa22.1■■□□□ 1.13
SNCAIP-220ENST00000514497 PELP1Q8IZL8 1130 aaKnown RBP22.09■■□□□ 1.13
SNCAIP-220ENST00000514497 ZBTB7CA1YPR0 619 aa22.08■■□□□ 1.13
SNCAIP-220ENST00000514497 FCHSD2O94868 740 aa22.08■■□□□ 1.13
SNCAIP-220ENST00000514497 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.13
SNCAIP-220ENST00000514497 ERBB3P21860 1342 aa22.07■■□□□ 1.12
SNCAIP-220ENST00000514497 MARCH10Q8NA82 808 aaPredicted RBP22.07■■□□□ 1.12
SNCAIP-220ENST00000514497 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
SNCAIP-220ENST00000514497 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
SNCAIP-220ENST00000514497 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNCAIP-220ENST00000514497 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
SNCAIP-220ENST00000514497 ADAMTS8Q9UP79 889 aa22.06■■□□□ 1.12
SNCAIP-220ENST00000514497 BCL9O00512 1426 aa22.06■■□□□ 1.12
SNCAIP-220ENST00000514497 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
SNCAIP-220ENST00000514497 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
SNCAIP-220ENST00000514497 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
SNCAIP-220ENST00000514497 TOM1L2Q6ZVM7 507 aa22.04■■□□□ 1.12
SNCAIP-220ENST00000514497 KDRP35968 1356 aa22.03■■□□□ 1.12
SNCAIP-220ENST00000514497 PLEKHG2Q9H7P9 1386 aa22.03■■□□□ 1.12
SNCAIP-220ENST00000514497 NCAPD2Q15021 1401 aa22.03■■□□□ 1.12
SNCAIP-220ENST00000514497 EYA1Q99502 592 aa22.02■■□□□ 1.12
SNCAIP-220ENST00000514497 WDR17Q8IZU2 1322 aa22.02■■□□□ 1.12
SNCAIP-220ENST00000514497 RGPD2P0DJD1 1756 aa22.02■■□□□ 1.11
SNCAIP-220ENST00000514497 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
SNCAIP-220ENST00000514497 NEFMP07197 916 aa22■■□□□ 1.11
SNCAIP-220ENST00000514497 RUNDC1Q96C34 613 aa22■■□□□ 1.11
SNCAIP-220ENST00000514497 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
SNCAIP-220ENST00000514497 PAPPAQ13219 1627 aa21.99■■□□□ 1.11
SNCAIP-220ENST00000514497 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
SNCAIP-220ENST00000514497 CDCA7Q9BWT1 371 aaPredicted RBP21.99■■□□□ 1.11
SNCAIP-220ENST00000514497 CSB-PGBD3P0DP91 1061 aa21.98■■□□□ 1.11
SNCAIP-220ENST00000514497 RSPH6AQ9H0K4 717 aa21.98■■□□□ 1.11
SNCAIP-220ENST00000514497 HSPA6P17066 643 aa21.97■■□□□ 1.11
SNCAIP-220ENST00000514497 NBPF6Q5VWK0 638 aa21.97■■□□□ 1.11
SNCAIP-220ENST00000514497 SULT6B1Q6IMI4 303 aa21.97■■□□□ 1.11
SNCAIP-220ENST00000514497 NBPF4Q96M43 638 aa21.97■■□□□ 1.11
SNCAIP-220ENST00000514497 PLEKHF1Q96S99 279 aa21.96■■□□□ 1.11
SNCAIP-220ENST00000514497 CARD10Q9BWT7 1032 aa21.96■■□□□ 1.11
SNCAIP-220ENST00000514497 NHSQ6T4R5 1651 aa21.95■■□□□ 1.1
SNCAIP-220ENST00000514497 POLD1P28340 1107 aa21.95■■□□□ 1.1
SNCAIP-220ENST00000514497 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
SNCAIP-220ENST00000514497 ATP10DQ9P241 1426 aa21.95■■□□□ 1.1
SNCAIP-220ENST00000514497 HMOX1P09601 288 aa21.94■■□□□ 1.1
SNCAIP-220ENST00000514497 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
SNCAIP-220ENST00000514497 GRIN3BO60391 1043 aa21.93■■□□□ 1.1
SNCAIP-220ENST00000514497 PRKAR2BP31323 418 aa21.93■■□□□ 1.1
SNCAIP-220ENST00000514497 ZNF827Q17R98 1081 aa21.93■■□□□ 1.1
SNCAIP-220ENST00000514497 NLGN2Q8NFZ4 835 aa21.93■■□□□ 1.1
SNCAIP-220ENST00000514497 COL24A1Q17RW2 1714 aa21.92■■□□□ 1.1
SNCAIP-220ENST00000514497 EXOC5O00471 708 aa21.92■■□□□ 1.1
SNCAIP-220ENST00000514497 GPBP1L1Q9HC44 474 aaPredicted RBP21.92■■□□□ 1.1
SNCAIP-220ENST00000514497 KAT6BQ8WYB5 2073 aa21.91■■□□□ 1.1
SNCAIP-220ENST00000514497 QSER1Q2KHR3 1735 aa21.9■■□□□ 1.1
SNCAIP-220ENST00000514497 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
SNCAIP-220ENST00000514497 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
SNCAIP-220ENST00000514497 SLC16A10Q8TF71 515 aa21.9■■□□□ 1.1
SNCAIP-220ENST00000514497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.9■■□□□ 1.1
SNCAIP-220ENST00000514497 BTAF1O14981 1849 aa21.9■■□□□ 1.1
SNCAIP-220ENST00000514497 AMOTQ4VCS5 1084 aa21.89■■□□□ 1.09
SNCAIP-220ENST00000514497 RAPGEF4Q8WZA2 1011 aa21.89■■□□□ 1.09
SNCAIP-220ENST00000514497 ACSBG1Q96GR2 724 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms