RNA–Protein interactions for RNA: ENST00000514467.5

SNCAIP-219, Transcript of synuclein alpha interacting protein, humanhuman

TSL 3

Gene SNCAIP, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-219ENST00000514467 RXRBP28702 533 aa17.88■□□□□ 0.45
SNCAIP-219ENST00000514467 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
SNCAIP-219ENST00000514467 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
SNCAIP-219ENST00000514467 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
SNCAIP-219ENST00000514467 RGS12O14924 1447 aa17.87■□□□□ 0.45
SNCAIP-219ENST00000514467 A0A0G2JS52 829 aa17.86■□□□□ 0.45
SNCAIP-219ENST00000514467 MYT1Q01538 1121 aa17.86■□□□□ 0.45
SNCAIP-219ENST00000514467 PNISRQ8TF01 805 aaKnown RBP17.86■□□□□ 0.45
SNCAIP-219ENST00000514467 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-219ENST00000514467 TNS2Q63HR2 1409 aa17.86■□□□□ 0.45
SNCAIP-219ENST00000514467 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
SNCAIP-219ENST00000514467 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
SNCAIP-219ENST00000514467 ONECUT3O60422 494 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-219ENST00000514467 FCHSD2O94868 740 aa17.84■□□□□ 0.45
SNCAIP-219ENST00000514467 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
SNCAIP-219ENST00000514467 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
SNCAIP-219ENST00000514467 DDB1Q16531 1140 aa17.82■□□□□ 0.44
SNCAIP-219ENST00000514467 FAM9BQ8IZU0 186 aa17.82■□□□□ 0.44
SNCAIP-219ENST00000514467 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
SNCAIP-219ENST00000514467 PLEKHF1Q96S99 279 aa17.81■□□□□ 0.44
SNCAIP-219ENST00000514467 SBF2Q86WG5 1849 aa17.8■□□□□ 0.44
SNCAIP-219ENST00000514467 EXOC5O00471 708 aa17.8■□□□□ 0.44
SNCAIP-219ENST00000514467 ZCRB1Q8TBF4 217 aaKnown RBP17.8■□□□□ 0.44
SNCAIP-219ENST00000514467 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
SNCAIP-219ENST00000514467 SCN11AQ9UI33 1791 aa17.8■□□□□ 0.44
SNCAIP-219ENST00000514467 DOT1LQ8TEK3 1739 aa17.8■□□□□ 0.44
SNCAIP-219ENST00000514467 TOGARAM1Q9Y4F4 1720 aa17.79■□□□□ 0.44
SNCAIP-219ENST00000514467 PLEKHO1Q53GL0 409 aaPredicted RBP17.79■□□□□ 0.44
SNCAIP-219ENST00000514467 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
SNCAIP-219ENST00000514467 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
SNCAIP-219ENST00000514467 PCDH11XQ9BZA7 1347 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 PCDH11YQ9BZA8 1340 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 KAT6BQ8WYB5 2073 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 EP400Q96L91 3159 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 NEFMP07197 916 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNCAIP-219ENST00000514467 ITGB4P16144 1822 aa17.77■□□□□ 0.44
SNCAIP-219ENST00000514467 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
SNCAIP-219ENST00000514467 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
SNCAIP-219ENST00000514467 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
SNCAIP-219ENST00000514467 ZNF530Q6P9A1 599 aaPredicted RBP17.76■□□□□ 0.43
SNCAIP-219ENST00000514467 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
SNCAIP-219ENST00000514467 ADAMTS7Q9UKP4 1686 aa17.76■□□□□ 0.43
SNCAIP-219ENST00000514467 CYP27B1O15528 508 aa17.75■□□□□ 0.43
SNCAIP-219ENST00000514467 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
SNCAIP-219ENST00000514467 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
SNCAIP-219ENST00000514467 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
SNCAIP-219ENST00000514467 PHKG2P15735 406 aa17.73■□□□□ 0.43
SNCAIP-219ENST00000514467 C1orf141Q5JVX7 400 aa17.73■□□□□ 0.43
SNCAIP-219ENST00000514467 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
SNCAIP-219ENST00000514467 NHSQ6T4R5 1651 aa17.73■□□□□ 0.43
SNCAIP-219ENST00000514467 SIPA1L3O60292 1781 aaPredicted RBP17.73■□□□□ 0.43
SNCAIP-219ENST00000514467 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
SNCAIP-219ENST00000514467 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
SNCAIP-219ENST00000514467 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
SNCAIP-219ENST00000514467 FAM182BQ5T319 152 aa17.72■□□□□ 0.43
SNCAIP-219ENST00000514467 KDM6AO15550 1401 aaPredicted RBP17.71■□□□□ 0.43
SNCAIP-219ENST00000514467 SENP3-EIF4A1A0A087X0R7 540 aa17.7■□□□□ 0.42
SNCAIP-219ENST00000514467 APAF1O14727 1248 aa17.7■□□□□ 0.42
SNCAIP-219ENST00000514467 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
SNCAIP-219ENST00000514467 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
SNCAIP-219ENST00000514467 BTAF1O14981 1849 aa17.69■□□□□ 0.42
SNCAIP-219ENST00000514467 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
SNCAIP-219ENST00000514467 BCL9O00512 1426 aa17.68■□□□□ 0.42
SNCAIP-219ENST00000514467 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
SNCAIP-219ENST00000514467 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
SNCAIP-219ENST00000514467 NEUROD2Q15784 382 aa17.68■□□□□ 0.42
SNCAIP-219ENST00000514467 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
SNCAIP-219ENST00000514467 RIPK4P57078 832 aa17.67■□□□□ 0.42
SNCAIP-219ENST00000514467 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
SNCAIP-219ENST00000514467 MRC1P22897 1456 aa17.67■□□□□ 0.42
SNCAIP-219ENST00000514467 DCAF5Q96JK2 942 aa17.66■□□□□ 0.42
SNCAIP-219ENST00000514467 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-219ENST00000514467 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
SNCAIP-219ENST00000514467 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
SNCAIP-219ENST00000514467 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
SNCAIP-219ENST00000514467 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
SNCAIP-219ENST00000514467 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
SNCAIP-219ENST00000514467 MCM10Q7L590 875 aa17.64■□□□□ 0.41
SNCAIP-219ENST00000514467 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-219ENST00000514467 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 IL17REQ8NFR9 667 aa17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 KDM3BQ7LBC6 1761 aa17.63■□□□□ 0.41
SNCAIP-219ENST00000514467 ERVV-2B6SEH9 535 aa17.61■□□□□ 0.41
SNCAIP-219ENST00000514467 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
SNCAIP-219ENST00000514467 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-219ENST00000514467 KCNQ2O43526 872 aa17.6■□□□□ 0.41
SNCAIP-219ENST00000514467 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-219ENST00000514467 UBR2Q8IWV8 1755 aa17.6■□□□□ 0.41
SNCAIP-219ENST00000514467 LY75O60449 1722 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 TRIM37O94972 964 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 CABP4P57796 275 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
SNCAIP-219ENST00000514467 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms