RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 C1QTNF2Q9BXJ5 285 aa8.03□□□□□ -1.12
CLDND1-228ENST00000513873 SOX11P35716 441 aa8.02□□□□□ -1.13
CLDND1-228ENST00000513873 CDK15Q96Q40 435 aa8.02□□□□□ -1.13
CLDND1-228ENST00000513873 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
CLDND1-228ENST00000513873 A6NJR5 290 aa8.01□□□□□ -1.13
CLDND1-228ENST00000513873 ZIC2O95409 532 aaPredicted RBP8.01□□□□□ -1.13
CLDND1-228ENST00000513873 MAP3K10Q02779 954 aa8.01□□□□□ -1.13
CLDND1-228ENST00000513873 NR5A1Q13285 461 aa8.01□□□□□ -1.13
CLDND1-228ENST00000513873 IRF5Q13568 498 aa8.01□□□□□ -1.13
CLDND1-228ENST00000513873 GPR161Q8N6U8 529 aaKnown RBP8.01□□□□□ -1.13
CLDND1-228ENST00000513873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
CLDND1-228ENST00000513873 RNF20Q5VTR2 975 aa8□□□□□ -1.13
CLDND1-228ENST00000513873 KCTD15Q96SI1 283 aaPredicted RBP8□□□□□ -1.13
CLDND1-228ENST00000513873 OCSTAMPQ9BR26 566 aa8□□□□□ -1.13
CLDND1-228ENST00000513873 ZMYND15Q9H091 742 aa8□□□□□ -1.13
CLDND1-228ENST00000513873 ARHGEF15O94989 841 aa7.99□□□□□ -1.13
CLDND1-228ENST00000513873 FSHRP23945 695 aa7.99□□□□□ -1.13
CLDND1-228ENST00000513873 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
CLDND1-228ENST00000513873 ENAMQ9NRM1 1142 aa7.99□□□□□ -1.13
CLDND1-228ENST00000513873 PHF20L1A8MW92 1017 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 GPR37L1O60883 481 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 RAB15P59190 212 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 PLA2G4EQ3MJ16 856 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 ESF1Q9H501 851 aaKnown RBP7.98□□□□□ -1.13
CLDND1-228ENST00000513873 ERCC6Q03468 1493 aa7.98□□□□□ -1.13
CLDND1-228ENST00000513873 K7ELQ4 463 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-228ENST00000513873 NANOS1Q8WY41 292 aaKnown RBP7.97□□□□□ -1.13
CLDND1-228ENST00000513873 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-228ENST00000513873 GRM5P41594 1212 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 SLFNL1Q499Z3 407 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 SEPT12Q8IYM1 358 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 Q8N3U1 123 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 WHAMMQ8TF30 809 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 PGPEP1Q9NXJ5 209 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 DNMT3LQ9UJW3 386 aa7.96□□□□□ -1.14
CLDND1-228ENST00000513873 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-228ENST00000513873 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
CLDND1-228ENST00000513873 CEP126Q9P2H0 1117 aa7.95□□□□□ -1.14
CLDND1-228ENST00000513873 EMILIN1Q9Y6C2 1016 aa7.95□□□□□ -1.14
CLDND1-228ENST00000513873 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
CLDND1-228ENST00000513873 TRAK2O60296 914 aa7.94□□□□□ -1.14
CLDND1-228ENST00000513873 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
CLDND1-228ENST00000513873 PTSQ03393 145 aa7.94□□□□□ -1.14
CLDND1-228ENST00000513873 RNFT1Q5M7Z0 435 aa7.94□□□□□ -1.14
CLDND1-228ENST00000513873 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
CLDND1-228ENST00000513873 HDGFL1Q5TGJ6 251 aa7.93□□□□□ -1.14
CLDND1-228ENST00000513873 PODNQ7Z5L7 613 aa7.93□□□□□ -1.14
CLDND1-228ENST00000513873 TSEN34Q9BSV6 310 aaKnown RBP7.93□□□□□ -1.14
CLDND1-228ENST00000513873 ZCCHC6Q5VYS8 1495 aaKnown RBP7.93□□□□□ -1.14
CLDND1-228ENST00000513873 TTLL8A6PVC2 850 aa7.92□□□□□ -1.14
CLDND1-228ENST00000513873 ESPNB1AK53 854 aa7.92□□□□□ -1.14
CLDND1-228ENST00000513873 INTS6LQ5JSJ4 861 aaKnown RBP7.92□□□□□ -1.14
CLDND1-228ENST00000513873 PPP1R26Q5T8A7 1209 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-228ENST00000513873 SV2AQ7L0J3 742 aa7.92□□□□□ -1.14
CLDND1-228ENST00000513873 RNF135Q8IUD6 432 aa7.92□□□□□ -1.14
CLDND1-228ENST00000513873 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-228ENST00000513873 MEIOBQ8N635 442 aa7.92□□□□□ -1.14
CLDND1-228ENST00000513873 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
CLDND1-228ENST00000513873 CDC14CA4D256 554 aa7.91□□□□□ -1.14
CLDND1-228ENST00000513873 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
CLDND1-228ENST00000513873 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
CLDND1-228ENST00000513873 ZNF777Q9ULD5 760 aaPredicted RBP7.91□□□□□ -1.14
CLDND1-228ENST00000513873 SCRIBQ14160 1630 aa7.9□□□□□ -1.14
CLDND1-228ENST00000513873 KRTAP9-6A0A140TA67 174 aa7.9□□□□□ -1.14
CLDND1-228ENST00000513873 POM121CA8CG34 1229 aa7.9□□□□□ -1.14
CLDND1-228ENST00000513873 NR3C2P08235 984 aa7.9□□□□□ -1.14
CLDND1-228ENST00000513873 BEND7Q8N7W2 519 aaPredicted RBP7.9□□□□□ -1.14
CLDND1-228ENST00000513873 ALG2Q9H553 416 aa7.9□□□□□ -1.14
CLDND1-228ENST00000513873 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
CLDND1-228ENST00000513873 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
CLDND1-228ENST00000513873 MYCP01106 439 aaPredicted RBP7.89□□□□□ -1.15
CLDND1-228ENST00000513873 VWA5B2Q8N398 1253 aa7.89□□□□□ -1.15
CLDND1-228ENST00000513873 GLMNQ92990 594 aa7.89□□□□□ -1.15
CLDND1-228ENST00000513873 SIRT1Q96EB6 747 aa7.89□□□□□ -1.15
CLDND1-228ENST00000513873 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
CLDND1-228ENST00000513873 ADAMTS2O95450 1211 aa7.88□□□□□ -1.15
CLDND1-228ENST00000513873 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
CLDND1-228ENST00000513873 SKIP12755 728 aa7.87□□□□□ -1.15
CLDND1-228ENST00000513873 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
CLDND1-228ENST00000513873 DCAF1Q9Y4B6 1507 aa7.87□□□□□ -1.15
CLDND1-228ENST00000513873 PROCP04070 461 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 ITGA6P23229 1130 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 USP4Q13107 963 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 LYPD4Q6UWN0 246 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 NFATC2IPQ8NCF5 419 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 TMPRSS4Q9NRS4 437 aa7.86□□□□□ -1.15
CLDND1-228ENST00000513873 FIGNL2A6NMB9 653 aa7.85□□□□□ -1.15
CLDND1-228ENST00000513873 LZTS3O60299 673 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-228ENST00000513873 SRSF11Q05519 484 aaKnown RBP7.85□□□□□ -1.15
CLDND1-228ENST00000513873 CC2D2BQ6DHV5 1058 aa7.85□□□□□ -1.15
CLDND1-228ENST00000513873 ZNF784Q8NCA9 323 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-228ENST00000513873 OXLD1Q5BKU9 147 aa7.84□□□□□ -1.15
CLDND1-228ENST00000513873 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms