RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 BRWD3Q6RI45 1802 aa28.12■■■□□ 2.09
NEIL3-202ENST00000513321 U2AF1L5P0DN76 240 aaPredicted RBP28.12■■■□□ 2.09
NEIL3-202ENST00000513321 U2AF1Q01081 240 aaKnown RBP eCLIP28.12■■■□□ 2.09
NEIL3-202ENST00000513321 FAM182BQ5T319 152 aa28.12■■■□□ 2.09
NEIL3-202ENST00000513321 LRRC37A3O60309 1634 aa28.1■■■□□ 2.09
NEIL3-202ENST00000513321 MARCH10Q8NA82 808 aaPredicted RBP28.09■■■□□ 2.09
NEIL3-202ENST00000513321 DDX54Q8TDD1 881 aaKnown RBP28.09■■■□□ 2.09
NEIL3-202ENST00000513321 TNS2Q63HR2 1409 aa28.09■■■□□ 2.09
NEIL3-202ENST00000513321 CCDC184Q52MB2 194 aa28.08■■■□□ 2.08
NEIL3-202ENST00000513321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.07■■■□□ 2.08
NEIL3-202ENST00000513321 SPG7Q9UQ90 795 aa28.07■■■□□ 2.08
NEIL3-202ENST00000513321 PLEKHO1Q53GL0 409 aaPredicted RBP28.04■■■□□ 2.08
NEIL3-202ENST00000513321 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
NEIL3-202ENST00000513321 FCHSD2O94868 740 aa28.03■■■□□ 2.08
NEIL3-202ENST00000513321 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
NEIL3-202ENST00000513321 AMOTQ4VCS5 1084 aa28.02■■■□□ 2.08
NEIL3-202ENST00000513321 PLEKHG2Q9H7P9 1386 aa28.02■■■□□ 2.08
NEIL3-202ENST00000513321 PRKAR2BP31323 418 aa28.02■■■□□ 2.08
NEIL3-202ENST00000513321 PCDH11XQ9BZA7 1347 aa28.01■■■□□ 2.07
NEIL3-202ENST00000513321 PCDH11YQ9BZA8 1340 aa28.01■■■□□ 2.07
NEIL3-202ENST00000513321 CYP27B1O15528 508 aa28.01■■■□□ 2.07
NEIL3-202ENST00000513321 MRS2Q9HD23 443 aa28.01■■■□□ 2.07
NEIL3-202ENST00000513321 WDR43Q15061 677 aaKnown RBP eCLIP28■■■□□ 2.07
NEIL3-202ENST00000513321 ZNF530Q6P9A1 599 aaPredicted RBP27.97■■■□□ 2.07
NEIL3-202ENST00000513321 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
NEIL3-202ENST00000513321 PHACTR3Q96KR7 559 aa27.97■■■□□ 2.07
NEIL3-202ENST00000513321 ADAMTS8Q9UP79 889 aa27.97■■■□□ 2.07
NEIL3-202ENST00000513321 PKD1L3Q7Z443 1732 aa27.96■■■□□ 2.07
NEIL3-202ENST00000513321 PHKG2P15735 406 aa27.96■■■□□ 2.07
NEIL3-202ENST00000513321 MTHFSDQ2M296 383 aaKnown RBP27.95■■■□□ 2.06
NEIL3-202ENST00000513321 PNNQ9H307 717 aaKnown RBP27.95■■■□□ 2.06
NEIL3-202ENST00000513321 SHANK3Q9BYB0 1731 aa27.94■■■□□ 2.06
NEIL3-202ENST00000513321 BCL9O00512 1426 aa27.93■■■□□ 2.06
NEIL3-202ENST00000513321 NKX1-1Q15270 411 aaPredicted RBP27.92■■■□□ 2.06
NEIL3-202ENST00000513321 C1orf141Q5JVX7 400 aa27.92■■■□□ 2.06
NEIL3-202ENST00000513321 PNISRQ8TF01 805 aaKnown RBP27.92■■■□□ 2.06
NEIL3-202ENST00000513321 PLEKHF1Q96S99 279 aa27.92■■■□□ 2.06
NEIL3-202ENST00000513321 TRIM37O94972 964 aa27.92■■■□□ 2.06
NEIL3-202ENST00000513321 ACSBG1Q96GR2 724 aa27.92■■■□□ 2.06
NEIL3-202ENST00000513321 NEFMP07197 916 aa27.91■■■□□ 2.06
NEIL3-202ENST00000513321 MIER1Q8N108 512 aa27.91■■■□□ 2.06
NEIL3-202ENST00000513321 UPF1Q92900 1129 aaKnown RBP eCLIP27.91■■■□□ 2.06
NEIL3-202ENST00000513321 EP400Q96L91 3159 aa27.9■■■□□ 2.06
NEIL3-202ENST00000513321 AKAP4Q5JQC9 854 aa27.89■■■□□ 2.06
NEIL3-202ENST00000513321 GAS2L2Q8NHY3 880 aa27.89■■■□□ 2.06
NEIL3-202ENST00000513321 KCNQ2O43526 872 aa27.88■■■□□ 2.05
NEIL3-202ENST00000513321 HSP90AB1P08238 724 aaKnown RBP27.88■■■□□ 2.05
NEIL3-202ENST00000513321 CCER2I3L3R5 266 aa27.87■■■□□ 2.05
NEIL3-202ENST00000513321 PRIM1P49642 420 aaKnown RBP27.87■■■□□ 2.05
NEIL3-202ENST00000513321 PTF1AQ7RTS3 328 aa27.87■■■□□ 2.05
NEIL3-202ENST00000513321 CCDC146Q8IYE0 955 aa27.87■■■□□ 2.05
NEIL3-202ENST00000513321 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
NEIL3-202ENST00000513321 SOCS7O14512 581 aa27.86■■■□□ 2.05
NEIL3-202ENST00000513321 MPRIPQ6WCQ1 1025 aa27.86■■■□□ 2.05
NEIL3-202ENST00000513321 CCDC125Q86Z20 511 aa27.86■■■□□ 2.05
NEIL3-202ENST00000513321 DCAF5Q96JK2 942 aa27.86■■■□□ 2.05
NEIL3-202ENST00000513321 BCL11BQ9C0K0 894 aaPredicted RBP27.86■■■□□ 2.05
NEIL3-202ENST00000513321 SYTL4Q96C24 671 aaPredicted RBP27.85■■■□□ 2.05
NEIL3-202ENST00000513321 RUNDC1Q96C34 613 aa27.84■■■□□ 2.05
NEIL3-202ENST00000513321 GNAT3A8MTJ3 354 aa27.82■■■□□ 2.04
NEIL3-202ENST00000513321 SF3B2Q13435 895 aaKnown RBP27.82■■■□□ 2.04
NEIL3-202ENST00000513321 FAM9BQ8IZU0 186 aa27.81■■■□□ 2.04
NEIL3-202ENST00000513321 LGR6Q9HBX8 967 aa27.81■■■□□ 2.04
NEIL3-202ENST00000513321 MAP3K5Q99683 1374 aa27.8■■■□□ 2.04
NEIL3-202ENST00000513321 APBA3O96018 575 aa27.8■■■□□ 2.04
NEIL3-202ENST00000513321 NFE2L2Q16236 605 aa27.8■■■□□ 2.04
NEIL3-202ENST00000513321 KDM6AO15550 1401 aaPredicted RBP27.8■■■□□ 2.04
NEIL3-202ENST00000513321 SBF2Q86WG5 1849 aa27.8■■■□□ 2.04
NEIL3-202ENST00000513321 KAT6BQ8WYB5 2073 aa27.79■■■□□ 2.04
NEIL3-202ENST00000513321 ERVV-2B6SEH9 535 aa27.79■■■□□ 2.04
NEIL3-202ENST00000513321 RNMTO43148 476 aaKnown RBP27.78■■■□□ 2.04
NEIL3-202ENST00000513321 IL17REQ8NFR9 667 aa27.77■■■□□ 2.04
NEIL3-202ENST00000513321 DOT1LQ8TEK3 1739 aa27.77■■■□□ 2.04
NEIL3-202ENST00000513321 TMPOP42166 694 aaKnown RBP27.76■■■□□ 2.03
NEIL3-202ENST00000513321 CABP4P57796 275 aa27.76■■■□□ 2.03
NEIL3-202ENST00000513321 TMOD3Q9NYL9 352 aa27.76■■■□□ 2.03
NEIL3-202ENST00000513321 NHSQ6T4R5 1651 aa27.75■■■□□ 2.03
NEIL3-202ENST00000513321 PIGBQ92521 554 aa27.75■■■□□ 2.03
NEIL3-202ENST00000513321 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
NEIL3-202ENST00000513321 HTATSF1O43719 755 aaKnown RBP27.74■■■□□ 2.03
NEIL3-202ENST00000513321 RIPK4P57078 832 aa27.74■■■□□ 2.03
NEIL3-202ENST00000513321 DEFB132Q7Z7B7 95 aa27.74■■■□□ 2.03
NEIL3-202ENST00000513321 RRP7AQ9Y3A4 280 aaKnown RBP27.74■■■□□ 2.03
NEIL3-202ENST00000513321 TOGARAM1Q9Y4F4 1720 aa27.74■■■□□ 2.03
NEIL3-202ENST00000513321 APAF1O14727 1248 aa27.73■■■□□ 2.03
NEIL3-202ENST00000513321 BAG6P46379 1132 aa27.73■■■□□ 2.03
NEIL3-202ENST00000513321 NEUROD2Q15784 382 aa27.73■■■□□ 2.03
NEIL3-202ENST00000513321 NFATC2IPQ8NCF5 419 aa27.73■■■□□ 2.03
NEIL3-202ENST00000513321 EN1Q05925 392 aaPredicted RBP27.72■■■□□ 2.03
NEIL3-202ENST00000513321 DCTN1Q14203 1278 aa27.72■■■□□ 2.03
NEIL3-202ENST00000513321 MCM10Q7L590 875 aa27.72■■■□□ 2.03
NEIL3-202ENST00000513321 TNS1Q9HBL0 1735 aaKnown RBP27.71■■■□□ 2.03
NEIL3-202ENST00000513321 SLC52A2Q9HAB3 445 aa27.71■■■□□ 2.03
NEIL3-202ENST00000513321 PLSCR1O15162 318 aa27.7■■■□□ 2.02
NEIL3-202ENST00000513321 TEFQ10587 303 aa27.68■■■□□ 2.02
NEIL3-202ENST00000513321 SCN11AQ9UI33 1791 aa27.68■■■□□ 2.02
NEIL3-202ENST00000513321 CEMIPQ8WUJ3 1361 aa27.68■■■□□ 2.02
NEIL3-202ENST00000513321 ITGB4P16144 1822 aa27.67■■■□□ 2.02
NEIL3-202ENST00000513321 CAMKK2Q96RR4 588 aa27.67■■■□□ 2.02
NEIL3-202ENST00000513321 ASAP1Q9ULH1 1129 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms