RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 GIPC2Q8TF65 315 aa11.76□□□□□ -0.53
RFC1-214ENST00000512726 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
RFC1-214ENST00000512726 TUT1Q9H6E5 874 aaKnown RBP11.76□□□□□ -0.53
RFC1-214ENST00000512726 ESPNB1AK53 854 aa11.75□□□□□ -0.53
RFC1-214ENST00000512726 ZNF211Q13398 564 aaPredicted RBP11.75□□□□□ -0.53
RFC1-214ENST00000512726 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
RFC1-214ENST00000512726 ZNF326Q5BKZ1 582 aaKnown RBP11.75□□□□□ -0.53
RFC1-214ENST00000512726 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
RFC1-214ENST00000512726 KIAA1522Q9P206 1035 aaPredicted RBP11.75□□□□□ -0.53
RFC1-214ENST00000512726 NPAS4Q8IUM7 802 aa11.74□□□□□ -0.53
RFC1-214ENST00000512726 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
RFC1-214ENST00000512726 MTRQ99707 1265 aa11.74□□□□□ -0.53
RFC1-214ENST00000512726 IGSF5Q9NSI5 407 aa11.74□□□□□ -0.53
RFC1-214ENST00000512726 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
RFC1-214ENST00000512726 SHROOM4Q9ULL8 1493 aa11.74□□□□□ -0.53
RFC1-214ENST00000512726 M0R2N6 131 aa11.73□□□□□ -0.53
RFC1-214ENST00000512726 C21orf2O43822 256 aa11.72□□□□□ -0.53
RFC1-214ENST00000512726 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
RFC1-214ENST00000512726 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
RFC1-214ENST00000512726 GTF3C2Q8WUA4 911 aaPredicted RBP11.72□□□□□ -0.53
RFC1-214ENST00000512726 C1QTNF2Q9BXJ5 285 aa11.72□□□□□ -0.53
RFC1-214ENST00000512726 ANO2Q9NQ90 1003 aa11.72□□□□□ -0.53
RFC1-214ENST00000512726 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.53
RFC1-214ENST00000512726 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
RFC1-214ENST00000512726 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
RFC1-214ENST00000512726 MAPK1P28482 360 aa11.7□□□□□ -0.54
RFC1-214ENST00000512726 WEE1P30291 646 aa11.7□□□□□ -0.54
RFC1-214ENST00000512726 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
RFC1-214ENST00000512726 IL21Q9HBE4 155 aa11.7□□□□□ -0.54
RFC1-214ENST00000512726 FKBP4Q02790 459 aaKnown RBP eCLIP11.69□□□□□ -0.54
RFC1-214ENST00000512726 ZSCAN29Q8IWY8 852 aaPredicted RBP11.69□□□□□ -0.54
RFC1-214ENST00000512726 MKNK1Q9BUB5 465 aa11.69□□□□□ -0.54
RFC1-214ENST00000512726 LGR5O75473 907 aa11.68□□□□□ -0.54
RFC1-214ENST00000512726 TSEN2Q8NCE0 465 aaKnown RBP11.68□□□□□ -0.54
RFC1-214ENST00000512726 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
RFC1-214ENST00000512726 USP35Q9P2H5 1018 aa11.68□□□□□ -0.54
RFC1-214ENST00000512726 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
RFC1-214ENST00000512726 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
RFC1-214ENST00000512726 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
RFC1-214ENST00000512726 KCTD12Q96CX2 325 aaKnown RBP11.67□□□□□ -0.54
RFC1-214ENST00000512726 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
RFC1-214ENST00000512726 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
RFC1-214ENST00000512726 DNMT3AQ9Y6K1 912 aaPredicted RBP11.67□□□□□ -0.54
RFC1-214ENST00000512726 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
RFC1-214ENST00000512726 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
RFC1-214ENST00000512726 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
RFC1-214ENST00000512726 COL26A1Q96A83 441 aa11.66□□□□□ -0.54
RFC1-214ENST00000512726 S1PR4O95977 384 aa11.65□□□□□ -0.54
RFC1-214ENST00000512726 RAB15P59190 212 aa11.65□□□□□ -0.54
RFC1-214ENST00000512726 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFC1-214ENST00000512726 KCTD15Q96SI1 283 aaPredicted RBP11.65□□□□□ -0.54
RFC1-214ENST00000512726 TCF3P15923 654 aa11.64□□□□□ -0.55
RFC1-214ENST00000512726 SH3BP2P78314 561 aa11.64□□□□□ -0.55
RFC1-214ENST00000512726 TRIM52Q96A61 297 aa11.64□□□□□ -0.55
RFC1-214ENST00000512726 COL19A1Q14993 1142 aa11.63□□□□□ -0.55
RFC1-214ENST00000512726 ZNF358Q9NW07 568 aa11.63□□□□□ -0.55
RFC1-214ENST00000512726 IGFBP4P22692 258 aa11.62□□□□□ -0.55
RFC1-214ENST00000512726 VAMP1P23763 118 aa11.62□□□□□ -0.55
RFC1-214ENST00000512726 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
RFC1-214ENST00000512726 ECM1Q16610 540 aa11.62□□□□□ -0.55
RFC1-214ENST00000512726 BACH1O14867 736 aa11.61□□□□□ -0.55
RFC1-214ENST00000512726 FOXO3O43524 673 aa11.61□□□□□ -0.55
RFC1-214ENST00000512726 FBXO33Q7Z6M2 555 aa11.61□□□□□ -0.55
RFC1-214ENST00000512726 HELQQ8TDG4 1101 aa11.61□□□□□ -0.55
RFC1-214ENST00000512726 ZBTB24O43167 697 aaPredicted RBP11.6□□□□□ -0.55
RFC1-214ENST00000512726 MTMR3Q13615 1198 aa11.6□□□□□ -0.55
RFC1-214ENST00000512726 CAPN12Q6ZSI9 719 aa11.6□□□□□ -0.55
RFC1-214ENST00000512726 VASH1Q7L8A9 365 aaPredicted RBP11.6□□□□□ -0.55
RFC1-214ENST00000512726 MAP4K5Q9Y4K4 846 aa11.6□□□□□ -0.55
RFC1-214ENST00000512726 FAM13AO94988 1023 aa11.59□□□□□ -0.55
RFC1-214ENST00000512726 VARSP26640 1264 aaKnown RBP11.59□□□□□ -0.55
RFC1-214ENST00000512726 SCTRP47872 440 aa11.59□□□□□ -0.55
RFC1-214ENST00000512726 RGL4Q8IZJ4 473 aa11.59□□□□□ -0.55
RFC1-214ENST00000512726 PURBQ96QR8 312 aaKnown RBP11.59□□□□□ -0.55
RFC1-214ENST00000512726 ERVH48-1M5A8F1 160 aa11.58□□□□□ -0.56
RFC1-214ENST00000512726 NAA30Q147X3 362 aaPredicted RBP11.58□□□□□ -0.56
RFC1-214ENST00000512726 INTS6LQ5JSJ4 861 aaKnown RBP11.58□□□□□ -0.56
RFC1-214ENST00000512726 CC2D2BQ6DHV5 1058 aa11.58□□□□□ -0.56
RFC1-214ENST00000512726 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
RFC1-214ENST00000512726 VTI1AQ96AJ9 217 aa11.58□□□□□ -0.56
RFC1-214ENST00000512726 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.56
RFC1-214ENST00000512726 TMEM229AB2RXF0 380 aa11.57□□□□□ -0.56
RFC1-214ENST00000512726 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
RFC1-214ENST00000512726 EAPPQ56P03 285 aaPredicted RBP11.57□□□□□ -0.56
RFC1-214ENST00000512726 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
RFC1-214ENST00000512726 SCG3Q8WXD2 468 aaKnown RBP11.57□□□□□ -0.56
RFC1-214ENST00000512726 PTPN5P54829 565 aa11.56□□□□□ -0.56
RFC1-214ENST00000512726 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
RFC1-214ENST00000512726 NPR3P17342 541 aa11.55□□□□□ -0.56
RFC1-214ENST00000512726 GDF10P55107 478 aa11.55□□□□□ -0.56
RFC1-214ENST00000512726 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
RFC1-214ENST00000512726 WNT7BP56706 349 aa11.54□□□□□ -0.56
RFC1-214ENST00000512726 TAGLNQ01995 201 aaKnown RBP11.54□□□□□ -0.56
RFC1-214ENST00000512726 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
RFC1-214ENST00000512726 SCNN1DP51172 638 aa11.53□□□□□ -0.56
RFC1-214ENST00000512726 TRIM32Q13049 653 aa11.53□□□□□ -0.56
RFC1-214ENST00000512726 RBCK1Q9BYM8 510 aa11.53□□□□□ -0.56
RFC1-214ENST00000512726 NDUFB5O43674 189 aa11.52□□□□□ -0.57
RFC1-214ENST00000512726 DHX9Q08211 1270 aaKnown RBP11.52□□□□□ -0.57
RFC1-214ENST00000512726 OSBPL3Q9H4L5 887 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms