RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
SUB1-210ENST00000511988 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
SUB1-210ENST00000511988 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
SUB1-210ENST00000511988 KCNQ2O43526 872 aa13.49□□□□□ -0.25
SUB1-210ENST00000511988 FCHSD2O94868 740 aa13.49□□□□□ -0.25
SUB1-210ENST00000511988 CAMKK2Q96RR4 588 aa13.49□□□□□ -0.25
SUB1-210ENST00000511988 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
SUB1-210ENST00000511988 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
SUB1-210ENST00000511988 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
SUB1-210ENST00000511988 EYA1Q99502 592 aa13.48□□□□□ -0.25
SUB1-210ENST00000511988 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
SUB1-210ENST00000511988 MAPK8IP3Q9UPT6 1336 aa13.47□□□□□ -0.25
SUB1-210ENST00000511988 FAM83GA6ND36 823 aa13.47□□□□□ -0.25
SUB1-210ENST00000511988 NEFMP07197 916 aa13.47□□□□□ -0.25
SUB1-210ENST00000511988 RUNDC1Q96C34 613 aa13.47□□□□□ -0.25
SUB1-210ENST00000511988 CRB1P82279 1406 aa13.47□□□□□ -0.25
SUB1-210ENST00000511988 CSB-PGBD3P0DP91 1061 aa13.46□□□□□ -0.25
SUB1-210ENST00000511988 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
SUB1-210ENST00000511988 FAM98CQ17RN3 349 aaKnown RBP13.46□□□□□ -0.25
SUB1-210ENST00000511988 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
SUB1-210ENST00000511988 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
SUB1-210ENST00000511988 PKD1L3Q7Z443 1732 aa13.46□□□□□ -0.25
SUB1-210ENST00000511988 HMOX1P09601 288 aa13.45□□□□□ -0.26
SUB1-210ENST00000511988 PRKAR2BP31323 418 aa13.45□□□□□ -0.26
SUB1-210ENST00000511988 YTHDC1Q96MU7 727 aaKnown RBP13.45□□□□□ -0.26
SUB1-210ENST00000511988 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
SUB1-210ENST00000511988 BTG4Q9NY30 223 aa13.45□□□□□ -0.26
SUB1-210ENST00000511988 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
SUB1-210ENST00000511988 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
SUB1-210ENST00000511988 AEBP1Q8IUX7 1158 aa13.44□□□□□ -0.26
SUB1-210ENST00000511988 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
SUB1-210ENST00000511988 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
SUB1-210ENST00000511988 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
SUB1-210ENST00000511988 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
SUB1-210ENST00000511988 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
SUB1-210ENST00000511988 EVA1CP58658 441 aa13.43□□□□□ -0.26
SUB1-210ENST00000511988 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
SUB1-210ENST00000511988 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
SUB1-210ENST00000511988 CARD10Q9BWT7 1032 aa13.43□□□□□ -0.26
SUB1-210ENST00000511988 CAPN15O75808 1086 aa13.42□□□□□ -0.26
SUB1-210ENST00000511988 TRIM37O94972 964 aa13.42□□□□□ -0.26
SUB1-210ENST00000511988 TOM1L2Q6ZVM7 507 aa13.42□□□□□ -0.26
SUB1-210ENST00000511988 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
SUB1-210ENST00000511988 OVOS2A0A0G2JMS6 1433 aa13.41□□□□□ -0.26
SUB1-210ENST00000511988 MEGF6O75095 1541 aa13.41□□□□□ -0.26
SUB1-210ENST00000511988 APAF1O14727 1248 aa13.41□□□□□ -0.26
SUB1-210ENST00000511988 APBA3O96018 575 aa13.41□□□□□ -0.26
SUB1-210ENST00000511988 TCP11L2Q8N4U5 519 aa13.41□□□□□ -0.26
SUB1-210ENST00000511988 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
SUB1-210ENST00000511988 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
SUB1-210ENST00000511988 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
SUB1-210ENST00000511988 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
SUB1-210ENST00000511988 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
SUB1-210ENST00000511988 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
SUB1-210ENST00000511988 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
SUB1-210ENST00000511988 TATP17735 454 aaPredicted RBP13.38□□□□□ -0.27
SUB1-210ENST00000511988 TMPOP42166 694 aaKnown RBP13.38□□□□□ -0.27
SUB1-210ENST00000511988 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
SUB1-210ENST00000511988 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
SUB1-210ENST00000511988 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
SUB1-210ENST00000511988 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
SUB1-210ENST00000511988 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
SUB1-210ENST00000511988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
SUB1-210ENST00000511988 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
SUB1-210ENST00000511988 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
SUB1-210ENST00000511988 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
SUB1-210ENST00000511988 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
SUB1-210ENST00000511988 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
SUB1-210ENST00000511988 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
SUB1-210ENST00000511988 NUP188Q5SRE5 1749 aa13.36□□□□□ -0.27
SUB1-210ENST00000511988 MAP3K5Q99683 1374 aa13.36□□□□□ -0.27
SUB1-210ENST00000511988 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
SUB1-210ENST00000511988 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
SUB1-210ENST00000511988 CHD4Q14839 1912 aa13.36□□□□□ -0.27
SUB1-210ENST00000511988 TNS2Q63HR2 1409 aa13.36□□□□□ -0.27
SUB1-210ENST00000511988 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
SUB1-210ENST00000511988 THSD7AQ9UPZ6 1657 aa13.35□□□□□ -0.27
SUB1-210ENST00000511988 SLC34A2O95436 690 aa13.35□□□□□ -0.27
SUB1-210ENST00000511988 IL2RBP14784 551 aa13.35□□□□□ -0.27
SUB1-210ENST00000511988 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
SUB1-210ENST00000511988 RREB1Q92766 1687 aa13.34□□□□□ -0.27
SUB1-210ENST00000511988 RIPK4P57078 832 aa13.34□□□□□ -0.27
SUB1-210ENST00000511988 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
SUB1-210ENST00000511988 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
SUB1-210ENST00000511988 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
SUB1-210ENST00000511988 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
SUB1-210ENST00000511988 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
SUB1-210ENST00000511988 CALD1Q05682 793 aaKnown RBP13.33□□□□□ -0.28
SUB1-210ENST00000511988 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
SUB1-210ENST00000511988 ZNF530Q6P9A1 599 aaPredicted RBP13.33□□□□□ -0.28
SUB1-210ENST00000511988 BARGINQ6ZT62 677 aa13.33□□□□□ -0.28
SUB1-210ENST00000511988 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
SUB1-210ENST00000511988 SYT17Q9BSW7 474 aa13.33□□□□□ -0.28
SUB1-210ENST00000511988 FHDC1Q9C0D6 1143 aaPredicted RBP13.33□□□□□ -0.28
SUB1-210ENST00000511988 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
SUB1-210ENST00000511988 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
SUB1-210ENST00000511988 ZBTB7AO95365 584 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms