RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GET4Q7L5D6 327 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 NBPF11Q86T75 865 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 CREBRFQ8IUR6 639 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 CCDC146Q8IYE0 955 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 SPDYE1Q8NFV5 336 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 LNPKQ9C0E8 428 aa6.41□□□□□ -1.38
TRAPPC11-208ENST00000511955 PTPRTO14522 1441 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 DHX57Q6P158 1386 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 TMEM2Q9UHN6 1383 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 TRPM2O94759 1503 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 UBR1Q8IWV7 1749 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 LMOD3Q0VAK6 560 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 RBM33Q96EV2 1170 aaKnown RBP6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 SPACA7Q96KW9 195 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 WWC3Q9ULE0 1092 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 COMMD10Q9Y6G5 202 aa6.4□□□□□ -1.38
TRAPPC11-208ENST00000511955 ADGRB3O60242 1522 aa6.4□□□□□ -1.39
TRAPPC11-208ENST00000511955 ZNF142P52746 1687 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC11-208ENST00000511955 MYO5BQ9ULV0 1848 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 DHX16O60231 1041 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 BDNFP23560 247 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 NBPF1Q3BBV0 1214 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 C4orf46Q504U0 113 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 GLMNQ92990 594 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 ANKRD30BQ9BXX2 1392 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 ZNF335Q9H4Z2 1342 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 AXDND1Q5T1B0 1012 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 DCAF11Q8TEB1 546 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 TBC1D2Q9BYX2 928 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 G3BP2Q9UN86 482 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 RIMS2Q9UQ26 1411 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 TMEM131LA2VDJ0 1609 aa6.39□□□□□ -1.39
TRAPPC11-208ENST00000511955 EGFLAMQ63HQ2 1017 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 KCNB2Q92953 911 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 STAC3Q96MF2 364 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 STRCQ7RTU9 1775 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 SCAF11Q99590 1463 aaKnown RBP6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 ERBB3P21860 1342 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 APPP05067 770 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 NOP9Q86U38 636 aaKnown RBP6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 CCDC85AQ96PX6 553 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
TRAPPC11-208ENST00000511955 NPHP4O75161 1426 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 CCDC189A1A4V9 331 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 POM121CA8CG34 1229 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 MLLT3P42568 568 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 GYS2P54840 703 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 ZKSCAN2Q63HK3 967 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 ADGRF5Q8IZF2 1346 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 TLDC2A0PJX2 215 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 VGFO15240 615 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 MMP14P50281 582 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 HDGFP51858 240 aaKnown RBP6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 AMOTL1Q8IY63 956 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 CACTIN-AS1Q8N1I8 211 aa6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 FBXO9Q9UK97 447 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC11-208ENST00000511955 NEURL4Q96JN8 1562 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 PRR12Q9ULL5 1215 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 FRMD4BQ9Y2L6 1034 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 SUPT16HQ9Y5B9 1047 aaKnown RBP6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 KIF1BO60333 1816 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 ZFYVE9O95405 1425 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 GOLGA6CA6NDK9 693 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 GOLGA6BA6NDN3 693 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 GOLGA6DP0CG33 693 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 IBSPP21815 317 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 TMEM132EQ6IEE7 984 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 TSPAN18Q96SJ8 248 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 GOLGA6AQ9NYA3 693 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 STK26Q9P289 416 aa6.36□□□□□ -1.39
TRAPPC11-208ENST00000511955 SLIT1O75093 1534 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 POLR1AO95602 1720 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 RECKO95980 971 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 BIRC2Q13490 618 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 REM2Q8IYK8 340 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 L3MBTL2Q969R5 705 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 SPATA31E1Q6ZUB1 1445 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 RPGRIP1LQ68CZ1 1315 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 ARHGAP23Q9P227 1491 aa6.35□□□□□ -1.39
TRAPPC11-208ENST00000511955 GOLIM4O00461 696 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 HOXA2O43364 376 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 NRDCO43847 1150 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 ERCC5P28715 1186 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 RPS6KC1Q96S38 1066 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 TANGO6Q9C0B7 1094 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 NEXMIFQ5QGS0 1516 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 IQGAP1P46940 1657 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 CFAP70Q5T0N1 1121 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 ATL2Q8NHH9 583 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 PNISRQ8TF01 805 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms