RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
CHD1-207ENST00000511628 DNMT3LQ9UJW3 386 aa6.63□□□□□ -1.35
CHD1-207ENST00000511628 GTF2E1P29083 439 aaPredicted RBP6.62□□□□□ -1.35
CHD1-207ENST00000511628 ERVK-9P63128 1117 aa6.62□□□□□ -1.35
CHD1-207ENST00000511628 SLC27A3Q5K4L6 730 aa6.62□□□□□ -1.35
CHD1-207ENST00000511628 IRF7Q92985 503 aa6.62□□□□□ -1.35
CHD1-207ENST00000511628 SIRT1Q96EB6 747 aa6.62□□□□□ -1.35
CHD1-207ENST00000511628 USP4Q13107 963 aa6.61□□□□□ -1.35
CHD1-207ENST00000511628 NPAS3Q8IXF0 933 aa6.61□□□□□ -1.35
CHD1-207ENST00000511628 POM121Q96HA1 1249 aa6.61□□□□□ -1.35
CHD1-207ENST00000511628 SCTRP47872 440 aa6.6□□□□□ -1.35
CHD1-207ENST00000511628 NFX1Q12986 1120 aaKnown RBP6.6□□□□□ -1.35
CHD1-207ENST00000511628 LYSMD3Q7Z3D4 306 aa6.6□□□□□ -1.35
CHD1-207ENST00000511628 CCDC85AQ96PX6 553 aaPredicted RBP6.6□□□□□ -1.35
CHD1-207ENST00000511628 A0A1W2PRU2 124 aa6.59□□□□□ -1.35
CHD1-207ENST00000511628 PTSQ03393 145 aa6.59□□□□□ -1.35
CHD1-207ENST00000511628 PRICKLE2Q7Z3G6 844 aa6.59□□□□□ -1.35
CHD1-207ENST00000511628 RNF217Q8TC41 542 aa6.59□□□□□ -1.35
CHD1-207ENST00000511628 CDCA7Q9BWT1 371 aaPredicted RBP6.59□□□□□ -1.35
CHD1-207ENST00000511628 ARHGEF10LQ9HCE6 1279 aa6.59□□□□□ -1.35
CHD1-207ENST00000511628 H3BM21 787 aa6.58□□□□□ -1.36
CHD1-207ENST00000511628 MAP7D1Q3KQU3 841 aa6.58□□□□□ -1.36
CHD1-207ENST00000511628 RAB6BQ9NRW1 208 aa6.58□□□□□ -1.36
CHD1-207ENST00000511628 PPFIA3O75145 1194 aa6.57□□□□□ -1.36
CHD1-207ENST00000511628 GNRH1P01148 92 aa6.57□□□□□ -1.36
CHD1-207ENST00000511628 SKIP12755 728 aa6.57□□□□□ -1.36
CHD1-207ENST00000511628 ESCO1Q5FWF5 840 aa6.57□□□□□ -1.36
CHD1-207ENST00000511628 PLPP7Q8NBV4 271 aa6.57□□□□□ -1.36
CHD1-207ENST00000511628 OSBPL3Q9H4L5 887 aa6.57□□□□□ -1.36
CHD1-207ENST00000511628 CDC14CA4D256 554 aa6.56□□□□□ -1.36
CHD1-207ENST00000511628 RHOQP17081 205 aa6.56□□□□□ -1.36
CHD1-207ENST00000511628 GPC1P35052 558 aa6.56□□□□□ -1.36
CHD1-207ENST00000511628 RNF144AP50876 292 aaPredicted RBP6.56□□□□□ -1.36
CHD1-207ENST00000511628 CLN3Q13286 438 aa6.56□□□□□ -1.36
CHD1-207ENST00000511628 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
CHD1-207ENST00000511628 CCDC155Q8N6L0 562 aa6.56□□□□□ -1.36
CHD1-207ENST00000511628 CLUAP1Q96AJ1 413 aa6.56□□□□□ -1.36
CHD1-207ENST00000511628 TRAK2O60296 914 aa6.55□□□□□ -1.36
CHD1-207ENST00000511628 INSM1Q01101 510 aaPredicted RBP6.55□□□□□ -1.36
CHD1-207ENST00000511628 PSME1Q06323 249 aa6.55□□□□□ -1.36
CHD1-207ENST00000511628 EML3Q32P44 896 aa6.55□□□□□ -1.36
CHD1-207ENST00000511628 TSGA10IPQ3SY00 556 aa6.55□□□□□ -1.36
CHD1-207ENST00000511628 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
CHD1-207ENST00000511628 PROSER2Q86WR7 435 aaPredicted RBP6.55□□□□□ -1.36
CHD1-207ENST00000511628 PHTF2Q8N3S3 785 aa6.55□□□□□ -1.36
CHD1-207ENST00000511628 KDF1Q8NAX2 398 aaPredicted RBP6.55□□□□□ -1.36
CHD1-207ENST00000511628 CNKSR1Q969H4 720 aa6.55□□□□□ -1.36
CHD1-207ENST00000511628 GMPRP36959 345 aa6.54□□□□□ -1.36
CHD1-207ENST00000511628 GNASQ5JWF2 1037 aa6.54□□□□□ -1.36
CHD1-207ENST00000511628 HDGFL1Q5TGJ6 251 aa6.54□□□□□ -1.36
CHD1-207ENST00000511628 RIPOR1Q6ZS17 1223 aa6.54□□□□□ -1.36
CHD1-207ENST00000511628 POM121CA8CG34 1229 aa6.53□□□□□ -1.36
CHD1-207ENST00000511628 POU4F2Q12837 409 aa6.53□□□□□ -1.36
CHD1-207ENST00000511628 ZSCAN10Q96SZ4 725 aaPredicted RBP6.53□□□□□ -1.36
CHD1-207ENST00000511628 GAS2L1Q99501 681 aaPredicted RBP6.53□□□□□ -1.36
CHD1-207ENST00000511628 ESYT1Q9BSJ8 1104 aa6.53□□□□□ -1.36
CHD1-207ENST00000511628 ALG2Q9H553 416 aa6.53□□□□□ -1.36
CHD1-207ENST00000511628 NOD1Q9Y239 953 aa6.53□□□□□ -1.36
CHD1-207ENST00000511628 SLC35F4A4IF30 521 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 PIK3CDO00329 1044 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 ITGA6P23229 1130 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 CENPCQ03188 943 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 FOXR1Q6PIV2 292 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 SV2AQ7L0J3 742 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 TAS1R3Q7RTX0 852 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 VWA5B2Q8N398 1253 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 TIMMDC1Q9NPL8 285 aa6.52□□□□□ -1.37
CHD1-207ENST00000511628 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
CHD1-207ENST00000511628 LZTS3O60299 673 aaPredicted RBP6.51□□□□□ -1.37
CHD1-207ENST00000511628 TLR1Q15399 786 aa6.51□□□□□ -1.37
CHD1-207ENST00000511628 NFATC2IPQ8NCF5 419 aa6.51□□□□□ -1.37
CHD1-207ENST00000511628 RBM19Q9Y4C8 960 aaKnown RBP6.51□□□□□ -1.37
CHD1-207ENST00000511628 FAM181BA6NEQ2 426 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 USP17L5A8MUK1 530 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
CHD1-207ENST00000511628 WIPF1O43516 503 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 IL2RAP01589 272 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 PHKA2P46019 1235 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 GDF10P55107 478 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
CHD1-207ENST00000511628 NBPF10Q6P3W6 841 aaKnown RBP6.5□□□□□ -1.37
CHD1-207ENST00000511628 TRIM50Q86XT4 487 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 DEPDC4Q8N2C3 294 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 NBPF15Q8N660 670 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 XAGE2Q96GT9 111 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 CALR3Q96L12 384 aaKnown RBP6.5□□□□□ -1.37
CHD1-207ENST00000511628 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 SERTAD1Q9UHV2 236 aa6.5□□□□□ -1.37
CHD1-207ENST00000511628 H7C1W4 665 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 GTF2IP78347 998 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 NCOA4Q13772 614 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 GLMNQ92990 594 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 ETNK1Q9HBU6 452 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 CHIC2Q9UKJ5 165 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 DYRK1BQ9Y463 629 aa6.49□□□□□ -1.37
CHD1-207ENST00000511628 STAU1O95793 577 aaKnown RBP6.48□□□□□ -1.37
CHD1-207ENST00000511628 CSB-PGBD3P0DP91 1061 aa6.48□□□□□ -1.37
CHD1-207ENST00000511628 VSIG8P0DPA2 414 aa6.48□□□□□ -1.37
CHD1-207ENST00000511628 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
CHD1-207ENST00000511628 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms