RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 RAB15P59190 212 aa7.99□□□□□ -1.13
SCAMP1-204ENST00000511551 TRIM22Q8IYM9 498 aa7.99□□□□□ -1.13
SCAMP1-204ENST00000511551 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
SCAMP1-204ENST00000511551 ENAMQ9NRM1 1142 aa7.99□□□□□ -1.13
SCAMP1-204ENST00000511551 USP17L8P0C7I0 530 aa7.98□□□□□ -1.13
SCAMP1-204ENST00000511551 GPC1P35052 558 aa7.98□□□□□ -1.13
SCAMP1-204ENST00000511551 PRICKLE2Q7Z3G6 844 aa7.98□□□□□ -1.13
SCAMP1-204ENST00000511551 FAM117AQ9C073 453 aa7.98□□□□□ -1.13
SCAMP1-204ENST00000511551 MBIPQ9NS73 344 aa7.98□□□□□ -1.13
SCAMP1-204ENST00000511551 ZNF837Q96EG3 531 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-204ENST00000511551 KDM4CQ9H3R0 1056 aa7.97□□□□□ -1.13
SCAMP1-204ENST00000511551 DBN1Q16643 649 aa7.96□□□□□ -1.14
SCAMP1-204ENST00000511551 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
SCAMP1-204ENST00000511551 CYLDQ9NQC7 956 aa7.96□□□□□ -1.14
SCAMP1-204ENST00000511551 ATP5J2-PTCD1G3V325 749 aa7.95□□□□□ -1.14
SCAMP1-204ENST00000511551 RHOQP17081 205 aa7.95□□□□□ -1.14
SCAMP1-204ENST00000511551 FOXR1Q6PIV2 292 aa7.95□□□□□ -1.14
SCAMP1-204ENST00000511551 DYRK1BQ9Y463 629 aa7.95□□□□□ -1.14
SCAMP1-204ENST00000511551 IGF1RP08069 1367 aa7.95□□□□□ -1.14
SCAMP1-204ENST00000511551 TRIM34Q9BYJ4 488 aa7.94□□□□□ -1.14
SCAMP1-204ENST00000511551 GPBP1L1Q9HC44 474 aaPredicted RBP7.94□□□□□ -1.14
SCAMP1-204ENST00000511551 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
SCAMP1-204ENST00000511551 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 PHF20L1A8MW92 1017 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 H7C1W4 665 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 BCRP11274 1271 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 RFC5P40937 340 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 BEND7Q8N7W2 519 aaPredicted RBP7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 DCAF5Q96JK2 942 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 ATP1B4Q9UN42 357 aaPredicted RBP7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 CNTNAP5Q8WYK1 1306 aa7.93□□□□□ -1.14
SCAMP1-204ENST00000511551 GIGYF1O75420 1035 aaPredicted RBP7.92□□□□□ -1.14
SCAMP1-204ENST00000511551 PLA2G4EQ3MJ16 856 aa7.92□□□□□ -1.14
SCAMP1-204ENST00000511551 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
SCAMP1-204ENST00000511551 ZBBXA8MT70 800 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 GPR25O00155 361 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 MSTNO14793 375 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 ITGB2P05107 769 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 WDR44Q5JSH3 913 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 RIPOR1Q6ZS17 1223 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 ACDQ96AP0 544 aa7.91□□□□□ -1.14
SCAMP1-204ENST00000511551 MEN1O00255 615 aa7.9□□□□□ -1.14
SCAMP1-204ENST00000511551 SPATA31C2B4DYI2 1134 aa7.89□□□□□ -1.15
SCAMP1-204ENST00000511551 POU4F2Q12837 409 aa7.89□□□□□ -1.15
SCAMP1-204ENST00000511551 CC2D2BQ6DHV5 1058 aa7.89□□□□□ -1.15
SCAMP1-204ENST00000511551 GTPBP3Q969Y2 492 aaKnown RBP7.89□□□□□ -1.15
SCAMP1-204ENST00000511551 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
SCAMP1-204ENST00000511551 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
SCAMP1-204ENST00000511551 ADAM23O75077 832 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 CLN3Q13286 438 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 NBPF10Q6P3W6 841 aaKnown RBP7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 TRERF1Q96PN7 1200 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 PCDHB9Q9Y5E1 797 aa7.88□□□□□ -1.15
SCAMP1-204ENST00000511551 FBXO45P0C2W1 286 aa7.87□□□□□ -1.15
SCAMP1-204ENST00000511551 SLC27A3Q5K4L6 730 aa7.87□□□□□ -1.15
SCAMP1-204ENST00000511551 PODNQ7Z5L7 613 aa7.87□□□□□ -1.15
SCAMP1-204ENST00000511551 GJD4Q96KN9 370 aaPredicted RBP7.87□□□□□ -1.15
SCAMP1-204ENST00000511551 NLRP3Q96P20 1036 aa7.87□□□□□ -1.15
SCAMP1-204ENST00000511551 GAS2L1Q99501 681 aaPredicted RBP7.87□□□□□ -1.15
SCAMP1-204ENST00000511551 OIP5O43482 229 aa7.86□□□□□ -1.15
SCAMP1-204ENST00000511551 TRAK2O60296 914 aa7.86□□□□□ -1.15
SCAMP1-204ENST00000511551 PROCP04070 461 aa7.86□□□□□ -1.15
SCAMP1-204ENST00000511551 MX2P20592 715 aa7.86□□□□□ -1.15
SCAMP1-204ENST00000511551 NSFL1CQ9UNZ2 370 aaKnown RBP7.86□□□□□ -1.15
SCAMP1-204ENST00000511551 F11P03951 625 aa7.85□□□□□ -1.15
SCAMP1-204ENST00000511551 CYP2U1Q7Z449 544 aa7.85□□□□□ -1.15
SCAMP1-204ENST00000511551 CFHR5Q9BXR6 569 aa7.85□□□□□ -1.15
SCAMP1-204ENST00000511551 SCTRP47872 440 aa7.84□□□□□ -1.15
SCAMP1-204ENST00000511551 NUCKS1Q9H1E3 243 aaKnown RBP7.84□□□□□ -1.15
SCAMP1-204ENST00000511551 TIMMDC1Q9NPL8 285 aa7.84□□□□□ -1.15
SCAMP1-204ENST00000511551 TAS1R3Q7RTX0 852 aa7.83□□□□□ -1.16
SCAMP1-204ENST00000511551 OSBPL3Q9H4L5 887 aa7.83□□□□□ -1.16
SCAMP1-204ENST00000511551 WASLO00401 505 aaPredicted RBP7.82□□□□□ -1.16
SCAMP1-204ENST00000511551 THBS1P07996 1170 aa7.82□□□□□ -1.16
SCAMP1-204ENST00000511551 MAP2K3P46734 347 aa7.82□□□□□ -1.16
SCAMP1-204ENST00000511551 XP32Q5T750 250 aa7.82□□□□□ -1.16
SCAMP1-204ENST00000511551 ZNF592Q92610 1267 aa7.82□□□□□ -1.16
SCAMP1-204ENST00000511551 OXCT2Q9BYC2 517 aaPredicted RBP7.82□□□□□ -1.16
SCAMP1-204ENST00000511551 NR1H3Q13133 447 aa7.81□□□□□ -1.16
SCAMP1-204ENST00000511551 PCMTD1Q96MG8 357 aaPredicted RBP7.81□□□□□ -1.16
SCAMP1-204ENST00000511551 GNRH1P01148 92 aa7.8□□□□□ -1.16
SCAMP1-204ENST00000511551 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
SCAMP1-204ENST00000511551 ESYT1Q9BSJ8 1104 aa7.8□□□□□ -1.16
SCAMP1-204ENST00000511551 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
SCAMP1-204ENST00000511551 PCDHB11Q9Y5F2 797 aa7.8□□□□□ -1.16
SCAMP1-204ENST00000511551 HRH3Q9Y5N1 445 aa7.8□□□□□ -1.16
SCAMP1-204ENST00000511551 CENPCQ03188 943 aa7.79□□□□□ -1.16
SCAMP1-204ENST00000511551 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
SCAMP1-204ENST00000511551 ALYREFQ86V81 257 aaKnown RBP7.79□□□□□ -1.16
SCAMP1-204ENST00000511551 KLRG1Q96E93 195 aa7.79□□□□□ -1.16
SCAMP1-204ENST00000511551 KRBA1A5PL33 1030 aa7.78□□□□□ -1.16
SCAMP1-204ENST00000511551 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
SCAMP1-204ENST00000511551 CNKSR1Q969H4 720 aa7.78□□□□□ -1.16
SCAMP1-204ENST00000511551 A0A1B0GTH6 734 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms