RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 LILRA1O75019 489 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 GDF11O95390 407 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 ADD1P35611 737 aaKnown RBP9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 PTGIRP43119 386 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 RAB15P59190 212 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 SVOPQ8N4V2 548 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
AC012055.1-201ENST00000511346 TMEM259Q4ZIN3 620 aa9.21□□□□□ -0.94
AC012055.1-201ENST00000511346 FOXD4L5Q5VV16 416 aaPredicted RBP9.21□□□□□ -0.94
AC012055.1-201ENST00000511346 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
AC012055.1-201ENST00000511346 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
AC012055.1-201ENST00000511346 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
AC012055.1-201ENST00000511346 ARHGEF15O94989 841 aa9.18□□□□□ -0.94
AC012055.1-201ENST00000511346 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
AC012055.1-201ENST00000511346 SUZ12Q15022 739 aaKnown RBP9.17□□□□□ -0.94
AC012055.1-201ENST00000511346 LYSMD3Q7Z3D4 306 aa9.17□□□□□ -0.94
AC012055.1-201ENST00000511346 TRIM52Q96A61 297 aa9.17□□□□□ -0.94
AC012055.1-201ENST00000511346 GJD4Q96KN9 370 aaPredicted RBP9.16□□□□□ -0.94
AC012055.1-201ENST00000511346 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
AC012055.1-201ENST00000511346 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
AC012055.1-201ENST00000511346 RNF144AP50876 292 aaPredicted RBP9.15□□□□□ -0.94
AC012055.1-201ENST00000511346 SRSF11Q05519 484 aaKnown RBP9.14□□□□□ -0.95
AC012055.1-201ENST00000511346 CYLDQ9NQC7 956 aa9.14□□□□□ -0.95
AC012055.1-201ENST00000511346 CUEDC1Q9NWM3 386 aaPredicted RBP9.14□□□□□ -0.95
AC012055.1-201ENST00000511346 MARSP56192 900 aaKnown RBP9.13□□□□□ -0.95
AC012055.1-201ENST00000511346 IRS1P35568 1242 aa9.12□□□□□ -0.95
AC012055.1-201ENST00000511346 GAS6Q14393 721 aa9.12□□□□□ -0.95
AC012055.1-201ENST00000511346 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
AC012055.1-201ENST00000511346 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
AC012055.1-201ENST00000511346 ZBBXA8MT70 800 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 ATP5J2-PTCD1G3V325 749 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 SOCS7O14512 581 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 GPC1P35052 558 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 SCARF2Q96GP6 870 aaPredicted RBP9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 GMCL1Q96IK5 515 aa9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
AC012055.1-201ENST00000511346 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
AC012055.1-201ENST00000511346 RHOQP17081 205 aa9.1□□□□□ -0.95
AC012055.1-201ENST00000511346 CCDC125Q86Z20 511 aa9.1□□□□□ -0.95
AC012055.1-201ENST00000511346 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
AC012055.1-201ENST00000511346 CELA2BP08218 269 aaPredicted RBP9.09□□□□□ -0.95
AC012055.1-201ENST00000511346 MAP3K10Q02779 954 aa9.09□□□□□ -0.95
AC012055.1-201ENST00000511346 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
AC012055.1-201ENST00000511346 ZNF837Q96EG3 531 aaPredicted RBP9.09□□□□□ -0.95
AC012055.1-201ENST00000511346 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
AC012055.1-201ENST00000511346 FBXO45P0C2W1 286 aa9.08□□□□□ -0.96
AC012055.1-201ENST00000511346 A0A1W2PRU2 124 aa9.07□□□□□ -0.96
AC012055.1-201ENST00000511346 MEN1O00255 615 aa9.07□□□□□ -0.96
AC012055.1-201ENST00000511346 GPR37L1O60883 481 aa9.07□□□□□ -0.96
AC012055.1-201ENST00000511346 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
AC012055.1-201ENST00000511346 MBIPQ9NS73 344 aa9.07□□□□□ -0.96
AC012055.1-201ENST00000511346 IGHA1P01876 353 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 CC2D2BQ6DHV5 1058 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 FOXR1Q6PIV2 292 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 MTMR14Q8NCE2 650 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 ENAMQ9NRM1 1142 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 DYRK1BQ9Y463 629 aa9.06□□□□□ -0.96
AC012055.1-201ENST00000511346 FOXK2Q01167 660 aa9.05□□□□□ -0.96
AC012055.1-201ENST00000511346 DBN1Q16643 649 aa9.05□□□□□ -0.96
AC012055.1-201ENST00000511346 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
AC012055.1-201ENST00000511346 ZMYND15Q9H091 742 aa9.05□□□□□ -0.96
AC012055.1-201ENST00000511346 H7C1W4 665 aa9.04□□□□□ -0.96
AC012055.1-201ENST00000511346 GPR25O00155 361 aa9.04□□□□□ -0.96
AC012055.1-201ENST00000511346 MCCD1P59942 119 aaPredicted RBP9.04□□□□□ -0.96
AC012055.1-201ENST00000511346 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
AC012055.1-201ENST00000511346 IGF1RP08069 1367 aa9.03□□□□□ -0.96
AC012055.1-201ENST00000511346 POU4F2Q12837 409 aa9.03□□□□□ -0.96
AC012055.1-201ENST00000511346 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
AC012055.1-201ENST00000511346 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
AC012055.1-201ENST00000511346 SNRKQ9NRH2 765 aa9.03□□□□□ -0.96
AC012055.1-201ENST00000511346 PDIA4P13667 645 aaKnown RBP9.02□□□□□ -0.97
AC012055.1-201ENST00000511346 CLN3Q13286 438 aa9.02□□□□□ -0.97
AC012055.1-201ENST00000511346 SLC27A3Q5K4L6 730 aa9.02□□□□□ -0.97
AC012055.1-201ENST00000511346 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
AC012055.1-201ENST00000511346 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 NR1H3Q13133 447 aa9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 WDR44Q5JSH3 913 aa9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 ZNF592Q92610 1267 aa9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 GTPBP3Q969Y2 492 aaKnown RBP9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 GAS2L1Q99501 681 aaPredicted RBP9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 NDUFB9Q9Y6M9 179 aa9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
AC012055.1-201ENST00000511346 SPATA31C2B4DYI2 1134 aa9□□□□□ -0.97
AC012055.1-201ENST00000511346 BCRP11274 1271 aa9□□□□□ -0.97
AC012055.1-201ENST00000511346 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
AC012055.1-201ENST00000511346 NBPF15Q8N660 670 aa9□□□□□ -0.97
AC012055.1-201ENST00000511346 TRERF1Q96PN7 1200 aa9□□□□□ -0.97
AC012055.1-201ENST00000511346 PHF20L1A8MW92 1017 aa8.99□□□□□ -0.97
AC012055.1-201ENST00000511346 APBB1O00213 710 aa8.99□□□□□ -0.97
AC012055.1-201ENST00000511346 TRAK2O60296 914 aa8.99□□□□□ -0.97
AC012055.1-201ENST00000511346 SCTRP47872 440 aa8.99□□□□□ -0.97
AC012055.1-201ENST00000511346 ZNF330Q9Y3S2 320 aaPredicted RBP8.99□□□□□ -0.97
AC012055.1-201ENST00000511346 CDK11BP21127 795 aaKnown RBP8.98□□□□□ -0.97
AC012055.1-201ENST00000511346 ACDQ96AP0 544 aa8.98□□□□□ -0.97
AC012055.1-201ENST00000511346 ARID3AQ99856 593 aa8.98□□□□□ -0.97
AC012055.1-201ENST00000511346 OSBPL3Q9H4L5 887 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms