RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SERPINB4P48594 390 aa9.18□□□□□ -0.94
HMGB1P47-201ENST00000511281 TPCN2Q8NHX9 752 aa9.18□□□□□ -0.94
HMGB1P47-201ENST00000511281 RBM19Q9Y4C8 960 aaKnown RBP9.18□□□□□ -0.94
HMGB1P47-201ENST00000511281 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
HMGB1P47-201ENST00000511281 PCDHB11Q9Y5F2 797 aa9.17□□□□□ -0.94
HMGB1P47-201ENST00000511281 VARSP26640 1264 aaKnown RBP9.16□□□□□ -0.94
HMGB1P47-201ENST00000511281 WEE1P30291 646 aa9.16□□□□□ -0.94
HMGB1P47-201ENST00000511281 WNT7BP56706 349 aa9.16□□□□□ -0.94
HMGB1P47-201ENST00000511281 SFI1A8K8P3 1242 aa9.15□□□□□ -0.94
HMGB1P47-201ENST00000511281 PTPN5P54829 565 aa9.15□□□□□ -0.94
HMGB1P47-201ENST00000511281 KCTD15Q96SI1 283 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P47-201ENST00000511281 WASLO00401 505 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P47-201ENST00000511281 PRMT3O60678 531 aa9.14□□□□□ -0.95
HMGB1P47-201ENST00000511281 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
HMGB1P47-201ENST00000511281 ANKLE1Q8NAG6 615 aa9.14□□□□□ -0.95
HMGB1P47-201ENST00000511281 COL26A1Q96A83 441 aa9.14□□□□□ -0.95
HMGB1P47-201ENST00000511281 ITGBL1O95965 494 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P47-201ENST00000511281 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
HMGB1P47-201ENST00000511281 TRIM32Q13049 653 aa9.13□□□□□ -0.95
HMGB1P47-201ENST00000511281 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
HMGB1P47-201ENST00000511281 MPNDQ8N594 471 aa9.13□□□□□ -0.95
HMGB1P47-201ENST00000511281 ICMTO60725 284 aa9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 MYCP01106 439 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 SCNN1AP37088 669 aa9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 PSME1Q06323 249 aa9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 CDK15Q96Q40 435 aa9.12□□□□□ -0.95
HMGB1P47-201ENST00000511281 RPIAP49247 311 aa9.11□□□□□ -0.95
HMGB1P47-201ENST00000511281 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
HMGB1P47-201ENST00000511281 RNF223E7ERA6 249 aa9.1□□□□□ -0.95
HMGB1P47-201ENST00000511281 ZBTB24O43167 697 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P47-201ENST00000511281 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
HMGB1P47-201ENST00000511281 SKOR1P84550 965 aa9.1□□□□□ -0.95
HMGB1P47-201ENST00000511281 ECM1Q16610 540 aa9.1□□□□□ -0.95
HMGB1P47-201ENST00000511281 UNCXA6NJT0 531 aa9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 TMEM229AB2RXF0 380 aa9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 IGFBP4P22692 258 aa9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 SCTRP47872 440 aa9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 SF3B2Q13435 895 aaKnown RBP9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 TSEN2Q8NCE0 465 aaKnown RBP9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 ZNF358Q9NW07 568 aa9.09□□□□□ -0.95
HMGB1P47-201ENST00000511281 FOXO3O43524 673 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 C21orf2O43822 256 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 KCNC4Q03721 635 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 POTEGQ6S5H5 508 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 IGSF5Q9NSI5 407 aa9.08□□□□□ -0.96
HMGB1P47-201ENST00000511281 PPEF1O14829 653 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P47-201ENST00000511281 SCNN1DP51172 638 aa9.07□□□□□ -0.96
HMGB1P47-201ENST00000511281 NPAS4Q8IUM7 802 aa9.07□□□□□ -0.96
HMGB1P47-201ENST00000511281 GAS2L2Q8NHY3 880 aa9.07□□□□□ -0.96
HMGB1P47-201ENST00000511281 HINFPQ9BQA5 517 aa9.07□□□□□ -0.96
HMGB1P47-201ENST00000511281 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
HMGB1P47-201ENST00000511281 H3BRB1 525 aa9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 NPR3P17342 541 aa9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 GGCXP38435 758 aa9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 EPHA4P54764 986 aa9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 DHX9Q08211 1270 aaKnown RBP9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 GTF3C2Q8WUA4 911 aaPredicted RBP9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
HMGB1P47-201ENST00000511281 BACH1O14867 736 aa9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 GRM5P41594 1212 aa9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 COL19A1Q14993 1142 aa9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 GLYCTKQ8IVS8 523 aa9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 SLC4A9Q96Q91 983 aa9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 BIN2Q9UBW5 565 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P47-201ENST00000511281 ABL1P00519 1130 aa9.04□□□□□ -0.96
HMGB1P47-201ENST00000511281 ZNF16P17020 682 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P47-201ENST00000511281 ARHGAP4P98171 946 aa9.04□□□□□ -0.96
HMGB1P47-201ENST00000511281 ZNF211Q13398 564 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P47-201ENST00000511281 HELQQ8TDG4 1101 aa9.04□□□□□ -0.96
HMGB1P47-201ENST00000511281 SEPT3Q9UH03 358 aa9.04□□□□□ -0.96
HMGB1P47-201ENST00000511281 ANKRD33BA6NCL7 494 aa9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 INHAP05111 366 aa9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 GDF10P55107 478 aa9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 ASB16Q96NS5 453 aa9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 DCTN4Q9UJW0 460 aa9.03□□□□□ -0.96
HMGB1P47-201ENST00000511281 SIAH2O43255 324 aa9.02□□□□□ -0.97
HMGB1P47-201ENST00000511281 CDAN1Q8IWY9 1227 aa9.02□□□□□ -0.97
HMGB1P47-201ENST00000511281 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
HMGB1P47-201ENST00000511281 KIAA1522Q9P206 1035 aaPredicted RBP9.02□□□□□ -0.97
HMGB1P47-201ENST00000511281 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
HMGB1P47-201ENST00000511281 LILRA1O75019 489 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 GNRH1P01148 92 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 VAMP1P23763 118 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 RAB15P59190 212 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 FOXK2Q01167 660 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 POTEAQ6S8J7 498 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 CAPN12Q6ZSI9 719 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms