RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 GNAT3A8MTJ3 354 aa10.5□□□□□ -0.73
SMAD1-209ENST00000511125 IL2RBP14784 551 aa10.5□□□□□ -0.73
SMAD1-209ENST00000511125 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
SMAD1-209ENST00000511125 COL5A2P05997 1499 aaPredicted RBP10.5□□□□□ -0.73
SMAD1-209ENST00000511125 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
SMAD1-209ENST00000511125 SLC39A6Q13433 755 aa10.5□□□□□ -0.73
SMAD1-209ENST00000511125 GAS2L2Q8NHY3 880 aa10.5□□□□□ -0.73
SMAD1-209ENST00000511125 CYP27B1O15528 508 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 ZCRB1Q8TBF4 217 aaKnown RBP10.49□□□□□ -0.73
SMAD1-209ENST00000511125 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 KCNQ3O43525 872 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 DUSP27Q5VZP5 1158 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 UNC5CLQ8IV45 518 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 LRP6O75581 1613 aa10.49□□□□□ -0.73
SMAD1-209ENST00000511125 MEGF6O75095 1541 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 TEFQ10587 303 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 TSPYL6Q8N831 410 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 NFATC2IPQ8NCF5 419 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
SMAD1-209ENST00000511125 FRAT1Q92837 279 aaPredicted RBP10.48□□□□□ -0.73
SMAD1-209ENST00000511125 ZNF428Q96B54 188 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 TSPYL4Q9UJ04 414 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 KIF24Q5T7B8 1368 aa10.48□□□□□ -0.73
SMAD1-209ENST00000511125 BCAR3O75815 825 aa10.47□□□□□ -0.73
SMAD1-209ENST00000511125 ZNF521Q96K83 1311 aa10.47□□□□□ -0.73
SMAD1-209ENST00000511125 EP400Q96L91 3159 aa10.47□□□□□ -0.73
SMAD1-209ENST00000511125 KDRP35968 1356 aa10.47□□□□□ -0.73
SMAD1-209ENST00000511125 EXOC5O00471 708 aa10.47□□□□□ -0.73
SMAD1-209ENST00000511125 E9PSI1 815 aa10.46□□□□□ -0.73
SMAD1-209ENST00000511125 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.73
SMAD1-209ENST00000511125 FKBP8Q14318 412 aa10.46□□□□□ -0.73
SMAD1-209ENST00000511125 SPATA31A6Q5VVP1 1343 aa10.46□□□□□ -0.74
SMAD1-209ENST00000511125 PHKG2P15735 406 aa10.46□□□□□ -0.74
SMAD1-209ENST00000511125 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.74
SMAD1-209ENST00000511125 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
SMAD1-209ENST00000511125 EIF2S2P20042 333 aaKnown RBP10.45□□□□□ -0.74
SMAD1-209ENST00000511125 DDB1Q16531 1140 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 AMOTQ4VCS5 1084 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 IFNL2Q8IZJ0 200 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 C8orf58Q8NAV2 365 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 FBXO41Q8TF61 875 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 CRB1P82279 1406 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 PIP4K2AP48426 406 aaPredicted RBP10.45□□□□□ -0.74
SMAD1-209ENST00000511125 AKAP4Q5JQC9 854 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 SPATA31A1Q5TZJ5 1347 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
SMAD1-209ENST00000511125 LMOD3Q0VAK6 560 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 WDR63Q8IWG1 891 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 CLUAP1Q96AJ1 413 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 PHF23Q9BUL5 403 aaPredicted RBP10.45□□□□□ -0.74
SMAD1-209ENST00000511125 MYH16Q9H6N6 1097 aa10.45□□□□□ -0.74
SMAD1-209ENST00000511125 COL18A1P39060 1754 aa10.44□□□□□ -0.74
SMAD1-209ENST00000511125 IQSEC2Q5JU85 1478 aa10.44□□□□□ -0.74
SMAD1-209ENST00000511125 CABP4P57796 275 aa10.44□□□□□ -0.74
SMAD1-209ENST00000511125 CRYBG1Q9Y4K1 1723 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 CANXP27824 592 aaKnown RBP10.43□□□□□ -0.74
SMAD1-209ENST00000511125 KCNQ4P56696 695 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 PDE3BQ13370 1112 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 TNNQ9UQP3 1299 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 ABCA3Q99758 1704 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 ANXA1P04083 346 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 PTF1AQ7RTS3 328 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 FNBP4Q8N3X1 1017 aaPredicted RBP10.43□□□□□ -0.74
SMAD1-209ENST00000511125 NGEFQ8N5V2 710 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 SPATA31A5Q5VU36 1347 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 SPATA31A7Q8IWB4 1347 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 BCL9LQ86UU0 1499 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 KCNQ2O43526 872 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 GNAI1P63096 354 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
SMAD1-209ENST00000511125 CCDC27Q2M243 656 aa10.43□□□□□ -0.74
SMAD1-209ENST00000511125 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
SMAD1-209ENST00000511125 GJD4Q96KN9 370 aaPredicted RBP10.43□□□□□ -0.74
SMAD1-209ENST00000511125 PRIM1P49642 420 aaKnown RBP10.42□□□□□ -0.74
SMAD1-209ENST00000511125 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
SMAD1-209ENST00000511125 ZNF330Q9Y3S2 320 aaPredicted RBP10.42□□□□□ -0.74
SMAD1-209ENST00000511125 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 MARCH10Q8NA82 808 aaPredicted RBP10.41□□□□□ -0.74
SMAD1-209ENST00000511125 ARXQ96QS3 562 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
SMAD1-209ENST00000511125 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
SMAD1-209ENST00000511125 RGPD1P0DJD0 1748 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 VPS72Q15906 364 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
SMAD1-209ENST00000511125 PCDH11XQ9BZA7 1347 aa10.4□□□□□ -0.74
SMAD1-209ENST00000511125 PCDH11YQ9BZA8 1340 aa10.4□□□□□ -0.74
SMAD1-209ENST00000511125 NEFLP07196 543 aa10.4□□□□□ -0.74
SMAD1-209ENST00000511125 IFT57Q9NWB7 429 aa10.4□□□□□ -0.74
SMAD1-209ENST00000511125 TRPC5Q9UL62 973 aaPredicted RBP10.4□□□□□ -0.74
SMAD1-209ENST00000511125 ASAP1Q9ULH1 1129 aa10.4□□□□□ -0.74
SMAD1-209ENST00000511125 DLG5Q8TDM6 1919 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms