RNA–Protein interactions for RNA: ENST00000510809.1

ITGA3-212, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-212ENST00000510809 BARGINQ6ZT62 677 aa21.36■■□□□ 1.01
ITGA3-212ENST00000510809 GJD4Q96KN9 370 aaPredicted RBP21.36■■□□□ 1.01
ITGA3-212ENST00000510809 SHANK3Q9BYB0 1731 aa21.35■■□□□ 1.01
ITGA3-212ENST00000510809 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
ITGA3-212ENST00000510809 QTRT2Q9H974 415 aaKnown RBP21.35■■□□□ 1.01
ITGA3-212ENST00000510809 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
ITGA3-212ENST00000510809 PLEKHF1Q96S99 279 aa21.34■■□□□ 1.01
ITGA3-212ENST00000510809 TNS2Q63HR2 1409 aa21.34■■□□□ 1.01
ITGA3-212ENST00000510809 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
ITGA3-212ENST00000510809 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
ITGA3-212ENST00000510809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.31■■□□□ 1
ITGA3-212ENST00000510809 RBM6P78332 1123 aaKnown RBP21.3■■□□□ 1
ITGA3-212ENST00000510809 PLEKHO1Q53GL0 409 aaPredicted RBP21.3■■□□□ 1
ITGA3-212ENST00000510809 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
ITGA3-212ENST00000510809 RGS17Q9UGC6 210 aaPredicted RBP21.3■■□□□ 1
ITGA3-212ENST00000510809 SPG7Q9UQ90 795 aa21.3■■□□□ 1
ITGA3-212ENST00000510809 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
ITGA3-212ENST00000510809 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
ITGA3-212ENST00000510809 A0A0G2JS52 829 aa21.28■■□□□ 1
ITGA3-212ENST00000510809 MYT1Q01538 1121 aa21.28■■□□□ 1
ITGA3-212ENST00000510809 PCDH11XQ9BZA7 1347 aa21.28■■□□□ 1
ITGA3-212ENST00000510809 PCDH11YQ9BZA8 1340 aa21.28■■□□□ 1
ITGA3-212ENST00000510809 NFE2L2Q16236 605 aa21.26■□□□□ 0.99
ITGA3-212ENST00000510809 ZNF530Q6P9A1 599 aaPredicted RBP21.26■□□□□ 0.99
ITGA3-212ENST00000510809 ZCRB1Q8TBF4 217 aaKnown RBP21.26■□□□□ 0.99
ITGA3-212ENST00000510809 APAF1O14727 1248 aa21.25■□□□□ 0.99
ITGA3-212ENST00000510809 RXRBP28702 533 aa21.25■□□□□ 0.99
ITGA3-212ENST00000510809 DDB1Q16531 1140 aa21.25■□□□□ 0.99
ITGA3-212ENST00000510809 MTHFSDQ2M296 383 aaKnown RBP21.25■□□□□ 0.99
ITGA3-212ENST00000510809 MAP3K5Q99683 1374 aa21.24■□□□□ 0.99
ITGA3-212ENST00000510809 ONECUT3O60422 494 aaPredicted RBP21.24■□□□□ 0.99
ITGA3-212ENST00000510809 TMPOP42166 694 aaKnown RBP21.24■□□□□ 0.99
ITGA3-212ENST00000510809 C1orf141Q5JVX7 400 aa21.24■□□□□ 0.99
ITGA3-212ENST00000510809 POTEAQ6S8J7 498 aa21.24■□□□□ 0.99
ITGA3-212ENST00000510809 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
ITGA3-212ENST00000510809 EXOC5O00471 708 aa21.23■□□□□ 0.99
ITGA3-212ENST00000510809 ADAMTS7Q9UKP4 1686 aa21.23■□□□□ 0.99
ITGA3-212ENST00000510809 BRWD3Q6RI45 1802 aa21.22■□□□□ 0.99
ITGA3-212ENST00000510809 RGS12O14924 1447 aa21.22■□□□□ 0.99
ITGA3-212ENST00000510809 LMOD3Q0VAK6 560 aa21.22■□□□□ 0.99
ITGA3-212ENST00000510809 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
ITGA3-212ENST00000510809 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
ITGA3-212ENST00000510809 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
ITGA3-212ENST00000510809 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
ITGA3-212ENST00000510809 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
ITGA3-212ENST00000510809 RRP7AQ9Y3A4 280 aaKnown RBP21.21■□□□□ 0.99
ITGA3-212ENST00000510809 PHKG2P15735 406 aa21.2■□□□□ 0.98
ITGA3-212ENST00000510809 NCBP3Q53F19 620 aaKnown RBP21.2■□□□□ 0.98
ITGA3-212ENST00000510809 DOT1LQ8TEK3 1739 aa21.19■□□□□ 0.98
ITGA3-212ENST00000510809 GNAT3A8MTJ3 354 aa21.19■□□□□ 0.98
ITGA3-212ENST00000510809 CYP27B1O15528 508 aa21.19■□□□□ 0.98
ITGA3-212ENST00000510809 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
ITGA3-212ENST00000510809 RIPK4P57078 832 aa21.19■□□□□ 0.98
ITGA3-212ENST00000510809 HNRNPUQ00839 825 aaKnown RBP eCLIP21.19■□□□□ 0.98
ITGA3-212ENST00000510809 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
ITGA3-212ENST00000510809 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
ITGA3-212ENST00000510809 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
ITGA3-212ENST00000510809 DDX54Q8TDD1 881 aaKnown RBP21.18■□□□□ 0.98
ITGA3-212ENST00000510809 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
ITGA3-212ENST00000510809 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
ITGA3-212ENST00000510809 KDM6AO15550 1401 aaPredicted RBP21.17■□□□□ 0.98
ITGA3-212ENST00000510809 MRC1P22897 1456 aa21.16■□□□□ 0.98
ITGA3-212ENST00000510809 SENP3-EIF4A1A0A087X0R7 540 aa21.16■□□□□ 0.98
ITGA3-212ENST00000510809 CCDC27Q2M243 656 aa21.16■□□□□ 0.98
ITGA3-212ENST00000510809 NKX1-1Q15270 411 aaPredicted RBP21.14■□□□□ 0.97
ITGA3-212ENST00000510809 MARCH10Q8NA82 808 aaPredicted RBP21.14■□□□□ 0.97
ITGA3-212ENST00000510809 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
ITGA3-212ENST00000510809 SIPA1L3O60292 1781 aaPredicted RBP21.13■□□□□ 0.97
ITGA3-212ENST00000510809 CEMIPQ8WUJ3 1361 aa21.13■□□□□ 0.97
ITGA3-212ENST00000510809 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
ITGA3-212ENST00000510809 BCL9O00512 1426 aa21.12■□□□□ 0.97
ITGA3-212ENST00000510809 ZBED9Q6R2W3 1325 aa21.12■□□□□ 0.97
ITGA3-212ENST00000510809 KRT27Q7Z3Y8 459 aa21.12■□□□□ 0.97
ITGA3-212ENST00000510809 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
ITGA3-212ENST00000510809 SALL2Q9Y467 1007 aaPredicted RBP21.12■□□□□ 0.97
ITGA3-212ENST00000510809 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
ITGA3-212ENST00000510809 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
ITGA3-212ENST00000510809 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
ITGA3-212ENST00000510809 MCM10Q7L590 875 aa21.11■□□□□ 0.97
ITGA3-212ENST00000510809 ITGB4P16144 1822 aa21.11■□□□□ 0.97
ITGA3-212ENST00000510809 RNMTO43148 476 aaKnown RBP21.1■□□□□ 0.97
ITGA3-212ENST00000510809 WWC1Q8IX03 1113 aa21.1■□□□□ 0.97
ITGA3-212ENST00000510809 ZNF521Q96K83 1311 aa21.09■□□□□ 0.97
ITGA3-212ENST00000510809 DCTN1Q14203 1278 aa21.09■□□□□ 0.97
ITGA3-212ENST00000510809 IL17REQ8NFR9 667 aa21.09■□□□□ 0.97
ITGA3-212ENST00000510809 SBF2Q86WG5 1849 aa21.08■□□□□ 0.97
ITGA3-212ENST00000510809 THUMPD2Q9BTF0 503 aaKnown RBP21.08■□□□□ 0.97
ITGA3-212ENST00000510809 TEFQ10587 303 aa21.07■□□□□ 0.96
ITGA3-212ENST00000510809 LGR6Q9HBX8 967 aa21.07■□□□□ 0.96
ITGA3-212ENST00000510809 ERVV-2B6SEH9 535 aa21.06■□□□□ 0.96
ITGA3-212ENST00000510809 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
ITGA3-212ENST00000510809 PAPPAQ13219 1627 aa21.06■□□□□ 0.96
ITGA3-212ENST00000510809 IL16Q14005 1332 aa21.05■□□□□ 0.96
ITGA3-212ENST00000510809 KDM3BQ7LBC6 1761 aa21.05■□□□□ 0.96
ITGA3-212ENST00000510809 SLC52A2Q9HAB3 445 aa21.05■□□□□ 0.96
ITGA3-212ENST00000510809 FAM196AQ6ZSG2 479 aa21.04■□□□□ 0.96
ITGA3-212ENST00000510809 KAT6BQ8WYB5 2073 aa21.03■□□□□ 0.96
ITGA3-212ENST00000510809 CABP4P57796 275 aa21.03■□□□□ 0.96
ITGA3-212ENST00000510809 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
ITGA3-212ENST00000510809 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms