RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PDCL3Q9H2J4 239 aa12.46□□□□□ -0.41
NEK1-206ENST00000510533 MYL6BP14649 208 aa12.46□□□□□ -0.41
NEK1-206ENST00000510533 CASTP20810 708 aaKnown RBP12.46□□□□□ -0.42
NEK1-206ENST00000510533 NFE2L2Q16236 605 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 GOLGA6L7A0A1B0GV03 622 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 ATP2B2Q01814 1243 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
NEK1-206ENST00000510533 ZRSR2Q15696 482 aaKnown RBP12.45□□□□□ -0.42
NEK1-206ENST00000510533 WASF1Q92558 559 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
NEK1-206ENST00000510533 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 MPHOSPH8Q99549 860 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 UBAC1Q9BSL1 405 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 UBXN4Q92575 508 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 PLEKHH2Q8IVE3 1493 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 SEPT7Q16181 437 aaKnown RBP12.44□□□□□ -0.42
NEK1-206ENST00000510533 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
NEK1-206ENST00000510533 NUTM1Q86Y26 1132 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
NEK1-206ENST00000510533 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 WWC2Q6AWC2 1192 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
NEK1-206ENST00000510533 KIF2AO00139 706 aaPredicted RBP12.43□□□□□ -0.42
NEK1-206ENST00000510533 TDO2P48775 406 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 FAM193AP78312 1265 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 CFAP100Q494V2 611 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 ARHGAP29Q52LW3 1261 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 CCDC102AQ96A19 550 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
NEK1-206ENST00000510533 PLCD4Q9BRC7 762 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 SLC52A1Q9NWF4 448 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 MX1P20591 662 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 CAMK4Q16566 473 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 PROSER2Q86WR7 435 aaPredicted RBP12.43□□□□□ -0.42
NEK1-206ENST00000510533 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
NEK1-206ENST00000510533 LRRFIP2Q9Y608 721 aaKnown RBP12.43□□□□□ -0.42
NEK1-206ENST00000510533 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
NEK1-206ENST00000510533 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
NEK1-206ENST00000510533 CCDC83Q8IWF9 413 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
NEK1-206ENST00000510533 CCDC183Q5T5S1 534 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 KIAA1328Q86T90 577 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 FERMT3Q86UX7 667 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
NEK1-206ENST00000510533 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
NEK1-206ENST00000510533 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
NEK1-206ENST00000510533 GLRX3O76003 335 aaKnown RBP12.41□□□□□ -0.42
NEK1-206ENST00000510533 SSBP05455 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK1-206ENST00000510533 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK1-206ENST00000510533 USP8P40818 1118 aa12.41□□□□□ -0.42
NEK1-206ENST00000510533 PTPN14Q15678 1187 aa12.41□□□□□ -0.42
NEK1-206ENST00000510533 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
NEK1-206ENST00000510533 ANKRD62A6NC57 917 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
NEK1-206ENST00000510533 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
NEK1-206ENST00000510533 GBP3Q9H0R5 595 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 DAPK1P53355 1430 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
NEK1-206ENST00000510533 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
NEK1-206ENST00000510533 TAF4BQ92750 862 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 ANO10Q9NW15 660 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 ZSCAN12O43309 604 aa12.4□□□□□ -0.42
NEK1-206ENST00000510533 SEPT11Q9NVA2 429 aaKnown RBP12.4□□□□□ -0.42
NEK1-206ENST00000510533 ERICH4A6NGS2 130 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 TROQ12816 1431 aaPredicted RBP12.39□□□□□ -0.43
NEK1-206ENST00000510533 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
NEK1-206ENST00000510533 RAI14Q9P0K7 980 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
NEK1-206ENST00000510533 PLEKHH1Q9ULM0 1364 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 DUSP27Q5VZP5 1158 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 SMARCA5O60264 1052 aaPredicted RBP12.39□□□□□ -0.43
NEK1-206ENST00000510533 PAF1Q8N7H5 531 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 KRI1Q8N9T8 703 aaKnown RBP12.39□□□□□ -0.43
NEK1-206ENST00000510533 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
NEK1-206ENST00000510533 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
NEK1-206ENST00000510533 IDH1O75874 414 aaKnown RBP12.38□□□□□ -0.43
NEK1-206ENST00000510533 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
NEK1-206ENST00000510533 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
NEK1-206ENST00000510533 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
NEK1-206ENST00000510533 ZNF397Q8NF99 534 aaPredicted RBP12.38□□□□□ -0.43
NEK1-206ENST00000510533 LRP2BPQ9P2M1 347 aa12.38□□□□□ -0.43
NEK1-206ENST00000510533 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms