RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 MCM10Q7L590 875 aa10.01□□□□□ -0.81
SSBP2-213ENST00000509743 MRPL50Q8N5N7 158 aaKnown RBP10.01□□□□□ -0.81
SSBP2-213ENST00000509743 C8orf58Q8NAV2 365 aa10.01□□□□□ -0.81
SSBP2-213ENST00000509743 API5Q9BZZ5 524 aaKnown RBP10.01□□□□□ -0.81
SSBP2-213ENST00000509743 RWDD1Q9H446 243 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-213ENST00000509743 TRPM3Q9HCF6 1732 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-213ENST00000509743 SOS1Q07889 1333 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-213ENST00000509743 TNS3Q68CZ2 1445 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 LMOD2Q6P5Q4 547 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 ITPRIPQ8IWB1 547 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 TSPYL6Q8N831 410 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 LTV1Q96GA3 475 aaPredicted RBP10□□□□□ -0.81
SSBP2-213ENST00000509743 TNNQ9UQP3 1299 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 ABCC6O95255 1503 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 PLEKHG2Q9H7P9 1386 aa10□□□□□ -0.81
SSBP2-213ENST00000509743 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
SSBP2-213ENST00000509743 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
SSBP2-213ENST00000509743 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
SSBP2-213ENST00000509743 LRRC37A3O60309 1634 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 ZBTB7CA1YPR0 619 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 PLEKHO1Q53GL0 409 aaPredicted RBP9.98□□□□□ -0.81
SSBP2-213ENST00000509743 TMEM57Q8N5G2 664 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 TSPYL4Q9UJ04 414 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 ABCC4O15439 1325 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 OVOS2A0A0G2JMS6 1433 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 PXDNQ92626 1479 aa9.98□□□□□ -0.81
SSBP2-213ENST00000509743 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
SSBP2-213ENST00000509743 IGHDP01880 384 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 CHMP4AQ9BY43 222 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 ZBTB40Q9NUA8 1239 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 PTPRCP08575 1304 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 SPATA31A3Q5VYP0 1347 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
SSBP2-213ENST00000509743 ALS2Q96Q42 1657 aa9.96□□□□□ -0.81
SSBP2-213ENST00000509743 ELL2O00472 640 aaPredicted RBP9.96□□□□□ -0.82
SSBP2-213ENST00000509743 PDE4AP27815 886 aa9.96□□□□□ -0.82
SSBP2-213ENST00000509743 HDAC1Q13547 482 aaPredicted RBP9.96□□□□□ -0.82
SSBP2-213ENST00000509743 TAF7Q15545 349 aaPredicted RBP9.96□□□□□ -0.82
SSBP2-213ENST00000509743 USHBP1Q8N6Y0 703 aa9.96□□□□□ -0.82
SSBP2-213ENST00000509743 BACH2Q9BYV9 841 aa9.96□□□□□ -0.82
SSBP2-213ENST00000509743 CPDO75976 1380 aa9.96□□□□□ -0.82
SSBP2-213ENST00000509743 STRCP1A6NGW2 1772 aa9.96□□□□□ -0.82
SSBP2-213ENST00000509743 AKAP4Q5JQC9 854 aa9.95□□□□□ -0.82
SSBP2-213ENST00000509743 BRINP3Q76B58 766 aa9.95□□□□□ -0.82
SSBP2-213ENST00000509743 ERBB3P21860 1342 aa9.95□□□□□ -0.82
SSBP2-213ENST00000509743 ZNF335Q9H4Z2 1342 aaPredicted RBP9.95□□□□□ -0.82
SSBP2-213ENST00000509743 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
SSBP2-213ENST00000509743 ANP32AP39687 249 aaKnown RBP9.94□□□□□ -0.82
SSBP2-213ENST00000509743 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
SSBP2-213ENST00000509743 ZNF530Q6P9A1 599 aaPredicted RBP9.94□□□□□ -0.82
SSBP2-213ENST00000509743 IL17REQ8NFR9 667 aa9.94□□□□□ -0.82
SSBP2-213ENST00000509743 LRRC59Q96AG4 307 aaKnown RBP9.94□□□□□ -0.82
SSBP2-213ENST00000509743 STK31Q9BXU1 1019 aa9.94□□□□□ -0.82
SSBP2-213ENST00000509743 LTN1O94822 1766 aa9.93□□□□□ -0.82
SSBP2-213ENST00000509743 SOS2Q07890 1332 aaPredicted RBP9.93□□□□□ -0.82
SSBP2-213ENST00000509743 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
SSBP2-213ENST00000509743 HOXB7P09629 217 aa9.93□□□□□ -0.82
SSBP2-213ENST00000509743 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
SSBP2-213ENST00000509743 CCDC30Q5VVM6 783 aa9.93□□□□□ -0.82
SSBP2-213ENST00000509743 INTS3Q68E01 1043 aaKnown RBP9.93□□□□□ -0.82
SSBP2-213ENST00000509743 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
SSBP2-213ENST00000509743 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
SSBP2-213ENST00000509743 RGS3P49796 1198 aa9.92□□□□□ -0.82
SSBP2-213ENST00000509743 ZC3H6P61129 1189 aaKnown RBP9.92□□□□□ -0.82
SSBP2-213ENST00000509743 KRT24Q2M2I5 525 aa9.92□□□□□ -0.82
SSBP2-213ENST00000509743 SMC5Q8IY18 1101 aa9.92□□□□□ -0.82
SSBP2-213ENST00000509743 RAPGEF4Q8WZA2 1011 aa9.92□□□□□ -0.82
SSBP2-213ENST00000509743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.82
SSBP2-213ENST00000509743 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
SSBP2-213ENST00000509743 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
SSBP2-213ENST00000509743 RGS12O14924 1447 aa9.91□□□□□ -0.82
SSBP2-213ENST00000509743 SLC4A2P04920 1241 aa9.91□□□□□ -0.82
SSBP2-213ENST00000509743 TEFQ10587 303 aa9.91□□□□□ -0.82
SSBP2-213ENST00000509743 DDX17Q92841 729 aaKnown RBP9.91□□□□□ -0.82
SSBP2-213ENST00000509743 MIS18AQ9NYP9 233 aa9.91□□□□□ -0.82
SSBP2-213ENST00000509743 PDZRN3Q9UPQ7 1066 aa9.91□□□□□ -0.82
SSBP2-213ENST00000509743 DLG5Q8TDM6 1919 aa9.9□□□□□ -0.82
SSBP2-213ENST00000509743 RNMTO43148 476 aaKnown RBP9.9□□□□□ -0.82
SSBP2-213ENST00000509743 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
SSBP2-213ENST00000509743 TATP17735 454 aaPredicted RBP9.9□□□□□ -0.82
SSBP2-213ENST00000509743 CCT4P50991 539 aaKnown RBP9.9□□□□□ -0.82
SSBP2-213ENST00000509743 SKAP1Q86WV1 359 aa9.9□□□□□ -0.82
SSBP2-213ENST00000509743 GCC1Q96CN9 775 aa9.9□□□□□ -0.82
SSBP2-213ENST00000509743 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
SSBP2-213ENST00000509743 SPG7Q9UQ90 795 aa9.9□□□□□ -0.82
SSBP2-213ENST00000509743 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
SSBP2-213ENST00000509743 C8orf34Q49A92 452 aa9.89□□□□□ -0.83
SSBP2-213ENST00000509743 PXDNLA1KZ92 1463 aa9.88□□□□□ -0.83
SSBP2-213ENST00000509743 EIF4A1P60842 406 aaKnown RBP9.88□□□□□ -0.83
SSBP2-213ENST00000509743 HDGFL1Q5TGJ6 251 aa9.88□□□□□ -0.83
SSBP2-213ENST00000509743 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
SSBP2-213ENST00000509743 LGR6Q9HBX8 967 aa9.88□□□□□ -0.83
SSBP2-213ENST00000509743 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
SSBP2-213ENST00000509743 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
SSBP2-213ENST00000509743 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
SSBP2-213ENST00000509743 NUCB1Q02818 461 aa9.87□□□□□ -0.83
SSBP2-213ENST00000509743 FLIIQ13045 1269 aa9.87□□□□□ -0.83
SSBP2-213ENST00000509743 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms