RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 KLRG1Q96E93 195 aa9.12□□□□□ -0.95
NIPBL-206ENST00000509429 LRP8Q14114 963 aa9.11□□□□□ -0.95
NIPBL-206ENST00000509429 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
NIPBL-206ENST00000509429 KCTD15Q96SI1 283 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-206ENST00000509429 ARID1BQ8NFD5 2236 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-206ENST00000509429 TXKP42681 527 aa9.1□□□□□ -0.95
NIPBL-206ENST00000509429 DYRK1BQ9Y463 629 aa9.1□□□□□ -0.95
NIPBL-206ENST00000509429 DYRK3O43781 588 aa9.09□□□□□ -0.95
NIPBL-206ENST00000509429 CARD14Q9BXL6 1004 aa9.09□□□□□ -0.95
NIPBL-206ENST00000509429 ADH1AP07327 375 aa9.08□□□□□ -0.96
NIPBL-206ENST00000509429 PTGIRP43119 386 aa9.08□□□□□ -0.96
NIPBL-206ENST00000509429 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
NIPBL-206ENST00000509429 MCTP1Q6DN14 999 aa9.08□□□□□ -0.96
NIPBL-206ENST00000509429 GOLGA6L1Q8N7Z2 621 aa9.08□□□□□ -0.96
NIPBL-206ENST00000509429 CDV3Q9UKY7 258 aaKnown RBP9.08□□□□□ -0.96
NIPBL-206ENST00000509429 CFHR5Q9BXR6 569 aa9.07□□□□□ -0.96
NIPBL-206ENST00000509429 PRSS36Q5K4E3 855 aa9.06□□□□□ -0.96
NIPBL-206ENST00000509429 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-206ENST00000509429 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-206ENST00000509429 PAX4O43316 350 aa9.05□□□□□ -0.96
NIPBL-206ENST00000509429 HYAL3O43820 417 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-206ENST00000509429 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-206ENST00000509429 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
NIPBL-206ENST00000509429 GJA5P36382 358 aa9.04□□□□□ -0.96
NIPBL-206ENST00000509429 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
NIPBL-206ENST00000509429 GIGYF2Q6Y7W6 1299 aaKnown RBP9.04□□□□□ -0.96
NIPBL-206ENST00000509429 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-206ENST00000509429 DGKGP49619 791 aa9.03□□□□□ -0.96
NIPBL-206ENST00000509429 KRI1Q8N9T8 703 aaKnown RBP9.03□□□□□ -0.96
NIPBL-206ENST00000509429 NUCKS1Q9H1E3 243 aaKnown RBP9.03□□□□□ -0.96
NIPBL-206ENST00000509429 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
NIPBL-206ENST00000509429 BTBD6Q96KE9 485 aa9.02□□□□□ -0.97
NIPBL-206ENST00000509429 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
NIPBL-206ENST00000509429 FZD5Q13467 585 aa9.01□□□□□ -0.97
NIPBL-206ENST00000509429 SLC10A4Q96EP9 437 aa9.01□□□□□ -0.97
NIPBL-206ENST00000509429 ADD1P35611 737 aaKnown RBP9□□□□□ -0.97
NIPBL-206ENST00000509429 SLCO4C1Q6ZQN7 724 aa9□□□□□ -0.97
NIPBL-206ENST00000509429 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
NIPBL-206ENST00000509429 HRCP23327 699 aa8.99□□□□□ -0.97
NIPBL-206ENST00000509429 SSTR3P32745 418 aaPredicted RBP8.99□□□□□ -0.97
NIPBL-206ENST00000509429 FMNL2Q96PY5 1086 aa8.99□□□□□ -0.97
NIPBL-206ENST00000509429 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
NIPBL-206ENST00000509429 TMPRSS4Q9NRS4 437 aa8.99□□□□□ -0.97
NIPBL-206ENST00000509429 PHF24Q9UPV7 400 aa8.99□□□□□ -0.97
NIPBL-206ENST00000509429 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
NIPBL-206ENST00000509429 PCDHB15Q9Y5E8 787 aa8.98□□□□□ -0.97
NIPBL-206ENST00000509429 LILRA1O75019 489 aa8.97□□□□□ -0.97
NIPBL-206ENST00000509429 SPATA31C1P0DKV0 1188 aa8.97□□□□□ -0.97
NIPBL-206ENST00000509429 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
NIPBL-206ENST00000509429 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
NIPBL-206ENST00000509429 GPC1P35052 558 aa8.96□□□□□ -0.98
NIPBL-206ENST00000509429 GGA1Q9UJY5 639 aa8.96□□□□□ -0.98
NIPBL-206ENST00000509429 EPXP11678 715 aa8.95□□□□□ -0.98
NIPBL-206ENST00000509429 POU4F2Q12837 409 aa8.95□□□□□ -0.98
NIPBL-206ENST00000509429 RSBN1LQ6PCB5 846 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-206ENST00000509429 TSHZ2Q9NRE2 1034 aa8.95□□□□□ -0.98
NIPBL-206ENST00000509429 F11P03951 625 aa8.94□□□□□ -0.98
NIPBL-206ENST00000509429 LAMC2Q13753 1193 aa8.94□□□□□ -0.98
NIPBL-206ENST00000509429 ARHGAP9Q9BRR9 750 aa8.94□□□□□ -0.98
NIPBL-206ENST00000509429 THBS1P07996 1170 aa8.91□□□□□ -0.98
NIPBL-206ENST00000509429 BMP4P12644 408 aa8.91□□□□□ -0.98
NIPBL-206ENST00000509429 PDXDC2PQ6P474 469 aa8.91□□□□□ -0.98
NIPBL-206ENST00000509429 RIC3Q7Z5B4 369 aa8.91□□□□□ -0.98
NIPBL-206ENST00000509429 TSC1Q92574 1164 aa8.91□□□□□ -0.98
NIPBL-206ENST00000509429 WDR44Q5JSH3 913 aa8.9□□□□□ -0.98
NIPBL-206ENST00000509429 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
NIPBL-206ENST00000509429 NBPF15Q8N660 670 aa8.9□□□□□ -0.98
NIPBL-206ENST00000509429 C2CD2LO14523 706 aa8.89□□□□□ -0.99
NIPBL-206ENST00000509429 ZBTB33Q86T24 672 aa8.89□□□□□ -0.99
NIPBL-206ENST00000509429 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
NIPBL-206ENST00000509429 PLVAPQ9BX97 442 aa8.89□□□□□ -0.99
NIPBL-206ENST00000509429 TIMMDC1Q9NPL8 285 aa8.89□□□□□ -0.99
NIPBL-206ENST00000509429 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
NIPBL-206ENST00000509429 CABLES1Q8TDN4 633 aa8.88□□□□□ -0.99
NIPBL-206ENST00000509429 TRIM11Q96F44 468 aa8.88□□□□□ -0.99
NIPBL-206ENST00000509429 ERVH48-1M5A8F1 160 aa8.87□□□□□ -0.99
NIPBL-206ENST00000509429 DIXDC1Q155Q3 683 aa8.87□□□□□ -0.99
NIPBL-206ENST00000509429 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
NIPBL-206ENST00000509429 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
NIPBL-206ENST00000509429 MEN1O00255 615 aa8.86□□□□□ -0.99
NIPBL-206ENST00000509429 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
NIPBL-206ENST00000509429 H2AFB2P0C5Z0 115 aa8.86□□□□□ -0.99
NIPBL-206ENST00000509429 NBPF20Q3BBV1 942 aa8.86□□□□□ -0.99
NIPBL-206ENST00000509429 APBA3O96018 575 aa8.85□□□□□ -0.99
NIPBL-206ENST00000509429 RAB15P59190 212 aa8.85□□□□□ -0.99
NIPBL-206ENST00000509429 SPATA31C2B4DYI2 1134 aa8.84□□□□□ -0.99
NIPBL-206ENST00000509429 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
NIPBL-206ENST00000509429 ARAFP10398 606 aa8.84□□□□□ -0.99
NIPBL-206ENST00000509429 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
NIPBL-206ENST00000509429 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
NIPBL-206ENST00000509429 ATXN7L1Q9ULK2 861 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-206ENST00000509429 ELNP15502 786 aa8.83□□□□□ -1
NIPBL-206ENST00000509429 UBAP2LQ14157 1087 aaKnown RBP8.83□□□□□ -1
NIPBL-206ENST00000509429 TRIM52Q96A61 297 aa8.83□□□□□ -1
NIPBL-206ENST00000509429 KRTAP4-11Q9BYQ6 195 aa8.83□□□□□ -1
NIPBL-206ENST00000509429 NEURL1BA8MQ27 555 aa8.82□□□□□ -1
NIPBL-206ENST00000509429 A0A1W2PRU2 124 aa8.81□□□□□ -1
NIPBL-206ENST00000509429 CTBSQ01459 385 aa8.81□□□□□ -1
NIPBL-206ENST00000509429 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
NIPBL-206ENST00000509429 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms