RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
SH3D21-206ENST00000508854 MAP3K19Q56UN5 1328 aa14.06□□□□□ -0.16
SH3D21-206ENST00000508854 PNPLA7Q6ZV29 1317 aa14.06□□□□□ -0.16
SH3D21-206ENST00000508854 C1QTNF8P60827 252 aa14.05□□□□□ -0.16
SH3D21-206ENST00000508854 RTL1A6NKG5 1358 aa14.05□□□□□ -0.16
SH3D21-206ENST00000508854 ST20-MTHFSA0A0A6YYL1 179 aa14.04□□□□□ -0.16
SH3D21-206ENST00000508854 GRIN3BO60391 1043 aa14.04□□□□□ -0.16
SH3D21-206ENST00000508854 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
SH3D21-206ENST00000508854 CCNL1Q9UK58 526 aaPredicted RBP14.04□□□□□ -0.16
SH3D21-206ENST00000508854 USP47Q96K76 1375 aa14.04□□□□□ -0.16
SH3D21-206ENST00000508854 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
SH3D21-206ENST00000508854 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
SH3D21-206ENST00000508854 MSH5O43196 834 aa14.03□□□□□ -0.16
SH3D21-206ENST00000508854 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
SH3D21-206ENST00000508854 FLAD1Q8NFF5 587 aa14.03□□□□□ -0.16
SH3D21-206ENST00000508854 TESK2Q96S53 571 aa14.03□□□□□ -0.16
SH3D21-206ENST00000508854 COL24A1Q17RW2 1714 aa14.03□□□□□ -0.16
SH3D21-206ENST00000508854 LY75O60449 1722 aa14.02□□□□□ -0.16
SH3D21-206ENST00000508854 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
SH3D21-206ENST00000508854 GIGYF1O75420 1035 aaPredicted RBP14.01□□□□□ -0.17
SH3D21-206ENST00000508854 TMF1P82094 1093 aa14.01□□□□□ -0.17
SH3D21-206ENST00000508854 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
SH3D21-206ENST00000508854 DOT1LQ8TEK3 1739 aa14.01□□□□□ -0.17
SH3D21-206ENST00000508854 NSD2O96028 1365 aa14□□□□□ -0.17
SH3D21-206ENST00000508854 KCNQ4P56696 695 aa14□□□□□ -0.17
SH3D21-206ENST00000508854 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
SH3D21-206ENST00000508854 NBPF4Q96M43 638 aa14□□□□□ -0.17
SH3D21-206ENST00000508854 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
SH3D21-206ENST00000508854 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
SH3D21-206ENST00000508854 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
SH3D21-206ENST00000508854 FYB1O15117 783 aa13.99□□□□□ -0.17
SH3D21-206ENST00000508854 MEGF6O75095 1541 aa13.99□□□□□ -0.17
SH3D21-206ENST00000508854 FBLN1P23142 703 aa13.98□□□□□ -0.17
SH3D21-206ENST00000508854 RRS1Q15050 365 aaKnown RBP13.98□□□□□ -0.17
SH3D21-206ENST00000508854 COL23A1Q86Y22 540 aaPredicted RBP13.98□□□□□ -0.17
SH3D21-206ENST00000508854 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
SH3D21-206ENST00000508854 INSRP06213 1382 aa13.97□□□□□ -0.17
SH3D21-206ENST00000508854 TUBGCP6Q96RT7 1819 aa13.97□□□□□ -0.17
SH3D21-206ENST00000508854 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
SH3D21-206ENST00000508854 NLGN2Q8NFZ4 835 aa13.97□□□□□ -0.17
SH3D21-206ENST00000508854 CD2APQ9Y5K6 639 aa13.97□□□□□ -0.17
SH3D21-206ENST00000508854 GOLGB1Q14789 3259 aaKnown RBP13.96□□□□□ -0.17
SH3D21-206ENST00000508854 SHANK3Q9BYB0 1731 aa13.96□□□□□ -0.17
SH3D21-206ENST00000508854 GGNBP2Q9H3C7 697 aa13.96□□□□□ -0.17
SH3D21-206ENST00000508854 FLT4P35916 1363 aa13.96□□□□□ -0.18
SH3D21-206ENST00000508854 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
SH3D21-206ENST00000508854 USHBP1Q8N6Y0 703 aa13.95□□□□□ -0.18
SH3D21-206ENST00000508854 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
SH3D21-206ENST00000508854 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
SH3D21-206ENST00000508854 AK7Q96M32 723 aa13.94□□□□□ -0.18
SH3D21-206ENST00000508854 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
SH3D21-206ENST00000508854 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
SH3D21-206ENST00000508854 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
SH3D21-206ENST00000508854 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
SH3D21-206ENST00000508854 C5P01031 1676 aa13.92□□□□□ -0.18
SH3D21-206ENST00000508854 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
SH3D21-206ENST00000508854 CYP27B1O15528 508 aa13.9□□□□□ -0.18
SH3D21-206ENST00000508854 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
SH3D21-206ENST00000508854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
SH3D21-206ENST00000508854 SSFA2P28290 1259 aa13.89□□□□□ -0.19
SH3D21-206ENST00000508854 GPBP1L1Q9HC44 474 aaPredicted RBP13.89□□□□□ -0.19
SH3D21-206ENST00000508854 TAF1LQ8IZX4 1826 aa13.89□□□□□ -0.19
SH3D21-206ENST00000508854 PPM1GO15355 546 aaPredicted RBP13.88□□□□□ -0.19
SH3D21-206ENST00000508854 PIGBQ92521 554 aa13.88□□□□□ -0.19
SH3D21-206ENST00000508854 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.87□□□□□ -0.19
SH3D21-206ENST00000508854 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 SIK1P57059 783 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 ATP10DQ9P241 1426 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 ITGB4P16144 1822 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 WASHC2AQ641Q2 1341 aa13.87□□□□□ -0.19
SH3D21-206ENST00000508854 PHF14O94880 888 aa13.86□□□□□ -0.19
SH3D21-206ENST00000508854 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
SH3D21-206ENST00000508854 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
SH3D21-206ENST00000508854 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
SH3D21-206ENST00000508854 NCAPD2Q15021 1401 aa13.85□□□□□ -0.19
SH3D21-206ENST00000508854 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
SH3D21-206ENST00000508854 PLEKHG2Q9H7P9 1386 aa13.84□□□□□ -0.19
SH3D21-206ENST00000508854 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
SH3D21-206ENST00000508854 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
SH3D21-206ENST00000508854 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
SH3D21-206ENST00000508854 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
SH3D21-206ENST00000508854 ATP6V1AP38606 617 aa13.83□□□□□ -0.2
SH3D21-206ENST00000508854 EYA1Q99502 592 aa13.83□□□□□ -0.2
SH3D21-206ENST00000508854 TOGARAM1Q9Y4F4 1720 aa13.82□□□□□ -0.2
SH3D21-206ENST00000508854 GNPATO15228 680 aa13.82□□□□□ -0.2
SH3D21-206ENST00000508854 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
SH3D21-206ENST00000508854 PHKG2P15735 406 aa13.82□□□□□ -0.2
SH3D21-206ENST00000508854 IFFO2Q5TF58 517 aa13.82□□□□□ -0.2
SH3D21-206ENST00000508854 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
SH3D21-206ENST00000508854 ADCY9O60503 1353 aa13.82□□□□□ -0.2
SH3D21-206ENST00000508854 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
SH3D21-206ENST00000508854 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
SH3D21-206ENST00000508854 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
SH3D21-206ENST00000508854 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
SH3D21-206ENST00000508854 ERVV-2B6SEH9 535 aa13.8□□□□□ -0.2
SH3D21-206ENST00000508854 HSPA6P17066 643 aa13.8□□□□□ -0.2
SH3D21-206ENST00000508854 ADRA2BP18089 450 aa13.8□□□□□ -0.2
SH3D21-206ENST00000508854 TGFB2P61812 414 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms