RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PLPP7Q8NBV4 271 aa10.69□□□□□ -0.7
DHFR-204ENST00000508282 INSM2Q96T92 566 aaPredicted RBP10.69□□□□□ -0.7
DHFR-204ENST00000508282 ZNF775Q96BV0 537 aaPredicted RBP10.68□□□□□ -0.7
DHFR-204ENST00000508282 TTLL8A6PVC2 850 aa10.67□□□□□ -0.7
DHFR-204ENST00000508282 CTSOP43234 321 aaPredicted RBP10.67□□□□□ -0.7
DHFR-204ENST00000508282 MAP7D1Q3KQU3 841 aa10.67□□□□□ -0.7
DHFR-204ENST00000508282 DNMT3LQ9UJW3 386 aa10.67□□□□□ -0.7
DHFR-204ENST00000508282 MYCP01106 439 aaPredicted RBP10.66□□□□□ -0.7
DHFR-204ENST00000508282 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
DHFR-204ENST00000508282 CYP2U1Q7Z449 544 aa10.66□□□□□ -0.7
DHFR-204ENST00000508282 UCN2Q96RP3 112 aa10.66□□□□□ -0.7
DHFR-204ENST00000508282 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
DHFR-204ENST00000508282 MAN1A2O60476 641 aa10.65□□□□□ -0.7
DHFR-204ENST00000508282 SKIP12755 728 aa10.65□□□□□ -0.7
DHFR-204ENST00000508282 USP4Q13107 963 aa10.65□□□□□ -0.7
DHFR-204ENST00000508282 NFATC2IPQ8NCF5 419 aa10.65□□□□□ -0.7
DHFR-204ENST00000508282 GLMNQ92990 594 aa10.65□□□□□ -0.7
DHFR-204ENST00000508282 POLMQ9NP87 494 aaPredicted RBP10.65□□□□□ -0.7
DHFR-204ENST00000508282 A0A1W2PRU2 124 aa10.64□□□□□ -0.71
DHFR-204ENST00000508282 FIGNL2A6NMB9 653 aa10.63□□□□□ -0.71
DHFR-204ENST00000508282 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
DHFR-204ENST00000508282 ARHGEF10LQ9HCE6 1279 aa10.63□□□□□ -0.71
DHFR-204ENST00000508282 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
DHFR-204ENST00000508282 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
DHFR-204ENST00000508282 RAB6BQ9NRW1 208 aa10.61□□□□□ -0.71
DHFR-204ENST00000508282 MEN1O00255 615 aa10.6□□□□□ -0.71
DHFR-204ENST00000508282 GNRH1P01148 92 aa10.6□□□□□ -0.71
DHFR-204ENST00000508282 CLN3Q13286 438 aa10.6□□□□□ -0.71
DHFR-204ENST00000508282 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.713e-17■■■□□ 16.1
DHFR-204ENST00000508282 SIRT1Q96EB6 747 aa10.6□□□□□ -0.71
DHFR-204ENST00000508282 ZMYND15Q9H091 742 aa10.6□□□□□ -0.71
DHFR-204ENST00000508282 ZNF777Q9ULD5 760 aaPredicted RBP10.6□□□□□ -0.71
DHFR-204ENST00000508282 USP17L5A8MUK1 530 aa10.59□□□□□ -0.71
DHFR-204ENST00000508282 RNF144AP50876 292 aaPredicted RBP10.59□□□□□ -0.71
DHFR-204ENST00000508282 NCOA4Q13772 614 aa10.59□□□□□ -0.71
DHFR-204ENST00000508282 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
DHFR-204ENST00000508282 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
DHFR-204ENST00000508282 STAU1O95793 577 aaKnown RBP10.58□□□□□ -0.72
DHFR-204ENST00000508282 IL2RAP01589 272 aa10.58□□□□□ -0.72
DHFR-204ENST00000508282 EML3Q32P44 896 aa10.58□□□□□ -0.72
DHFR-204ENST00000508282 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
DHFR-204ENST00000508282 TERTO14746 1132 aaKnown RBP10.57□□□□□ -0.72
DHFR-204ENST00000508282 ATP9BO43861 1147 aa10.57□□□□□ -0.72
DHFR-204ENST00000508282 LZTS3O60299 673 aaPredicted RBP10.57□□□□□ -0.72
DHFR-204ENST00000508282 GPC1P35052 558 aa10.56□□□□□ -0.72
DHFR-204ENST00000508282 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
DHFR-204ENST00000508282 CNKSR1Q969H4 720 aa10.56□□□□□ -0.72
DHFR-204ENST00000508282 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
DHFR-204ENST00000508282 ESYT1Q9BSJ8 1104 aa10.56□□□□□ -0.72
DHFR-204ENST00000508282 HRH3Q9Y5N1 445 aa10.56□□□□□ -0.72
DHFR-204ENST00000508282 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 VEGFBP49765 207 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 SCNN1DP51172 638 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 PTSQ03393 145 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 USP17L2Q6R6M4 530 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 ETNK1Q9HBU6 452 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 TFIP11Q9UBB9 837 aaKnown RBP10.55□□□□□ -0.72
DHFR-204ENST00000508282 PCDHGA11Q9Y5H2 935 aa10.55□□□□□ -0.72
DHFR-204ENST00000508282 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
DHFR-204ENST00000508282 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
DHFR-204ENST00000508282 LYSMD3Q7Z3D4 306 aa10.54□□□□□ -0.72
DHFR-204ENST00000508282 PRICKLE2Q7Z3G6 844 aa10.54□□□□□ -0.72
DHFR-204ENST00000508282 GRIP2Q9C0E4 1043 aa10.54□□□□□ -0.72
DHFR-204ENST00000508282 NOD1Q9Y239 953 aa10.54□□□□□ -0.72
DHFR-204ENST00000508282 ESCO1Q5FWF5 840 aa10.53□□□□□ -0.72
DHFR-204ENST00000508282 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
DHFR-204ENST00000508282 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
DHFR-204ENST00000508282 H3BM21 787 aa10.52□□□□□ -0.73
DHFR-204ENST00000508282 GTF2IP78347 998 aa10.52□□□□□ -0.73
DHFR-204ENST00000508282 CENPCQ03188 943 aa10.52□□□□□ -0.73
DHFR-204ENST00000508282 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
DHFR-204ENST00000508282 LCE2CQ5TA81 110 aa10.52□□□□□ -0.73
DHFR-204ENST00000508282 NPAS3Q8IXF0 933 aa10.52□□□□□ -0.73
DHFR-204ENST00000508282 MAFBQ9Y5Q3 323 aaPredicted RBP10.52□□□□□ -0.73
DHFR-204ENST00000508282 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
DHFR-204ENST00000508282 SLC35F4A4IF30 521 aa10.51□□□□□ -0.73
DHFR-204ENST00000508282 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
DHFR-204ENST00000508282 WFS1O76024 890 aa10.51□□□□□ -0.73
DHFR-204ENST00000508282 GDF10P55107 478 aa10.51□□□□□ -0.73
DHFR-204ENST00000508282 FHDC1Q9C0D6 1143 aaPredicted RBP10.51□□□□□ -0.73
DHFR-204ENST00000508282 TMEM229AB2RXF0 380 aa10.5□□□□□ -0.73
DHFR-204ENST00000508282 INHAP05111 366 aa10.5□□□□□ -0.73
DHFR-204ENST00000508282 RHOQP17081 205 aa10.5□□□□□ -0.73
DHFR-204ENST00000508282 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
DHFR-204ENST00000508282 WASLO00401 505 aaPredicted RBP10.49□□□□□ -0.73
DHFR-204ENST00000508282 POU4F2Q12837 409 aa10.49□□□□□ -0.73
DHFR-204ENST00000508282 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
DHFR-204ENST00000508282 CLDN10P78369 228 aa10.48□□□□□ -0.73
DHFR-204ENST00000508282 TRIM50Q86XT4 487 aa10.48□□□□□ -0.73
DHFR-204ENST00000508282 KIAA1024Q9UPX6 916 aa10.48□□□□□ -0.73
DHFR-204ENST00000508282 SPATA31C2B4DYI2 1134 aa10.47□□□□□ -0.73
DHFR-204ENST00000508282 ZBTB7BO15156 539 aaPredicted RBP10.47□□□□□ -0.73
DHFR-204ENST00000508282 PSME1Q06323 249 aa10.47□□□□□ -0.73
DHFR-204ENST00000508282 C14orf37Q86TY3 774 aa10.47□□□□□ -0.73
DHFR-204ENST00000508282 SLC16A10Q8TF71 515 aa10.47□□□□□ -0.73
DHFR-204ENST00000508282 ZSCAN10Q96SZ4 725 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms