RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.89
PDGFRA-206ENST00000508170 ZHX3Q9H4I2 956 aa9.46□□□□□ -0.89
PDGFRA-206ENST00000508170 EID1Q9Y6B2 187 aa9.46□□□□□ -0.89
PDGFRA-206ENST00000508170 TNFRSF10BO14763 440 aa9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 LZTS3O60299 673 aaPredicted RBP9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 OSBPP22059 807 aa9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 GNL2Q13823 731 aaKnown RBP9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 SYCP2LQ5T4T6 812 aa9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 OTUD6BQ8N6M0 293 aa9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 SVIPQ8NHG7 77 aa9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 TYW1Q9NV66 732 aaKnown RBP9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 PUF60Q9UHX1 559 aaKnown RBP9.46□□□□□ -0.9
PDGFRA-206ENST00000508170 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
PDGFRA-206ENST00000508170 KCTD2Q14681 263 aa9.45□□□□□ -0.9
PDGFRA-206ENST00000508170 MAPRE1Q15691 268 aaKnown RBP9.45□□□□□ -0.9
PDGFRA-206ENST00000508170 PPP1R15BQ5SWA1 713 aa9.45□□□□□ -0.9
PDGFRA-206ENST00000508170 OSCARQ8IYS5 282 aa9.45□□□□□ -0.9
PDGFRA-206ENST00000508170 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
PDGFRA-206ENST00000508170 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 CBLBQ13191 982 aa9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 WDR75Q8IWA0 830 aaKnown RBP9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 CHST12Q9NRB3 414 aa9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 FEZ2Q9UHY8 353 aaPredicted RBP9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 EFCAB3Q8N7B9 438 aa9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 FRMD6Q96NE9 622 aa9.44□□□□□ -0.9
PDGFRA-206ENST00000508170 AP1G2O75843 785 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 PTGDRQ13258 359 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 APBA2Q99767 749 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 HDAC5Q9UQL6 1122 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 COL6A1P12109 1028 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 TERF1P54274 439 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 L1TD1Q5T7N2 865 aaKnown RBP9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 ZNF710Q8N1W2 664 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 MRFAP1L1Q96HT8 127 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 FAM161BQ96MY7 647 aa9.43□□□□□ -0.9
PDGFRA-206ENST00000508170 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
PDGFRA-206ENST00000508170 ZRSR2Q15696 482 aaKnown RBP9.42□□□□□ -0.9
PDGFRA-206ENST00000508170 FERMT3Q86UX7 667 aa9.42□□□□□ -0.9
PDGFRA-206ENST00000508170 PAF1Q8N7H5 531 aa9.42□□□□□ -0.9
PDGFRA-206ENST00000508170 MUC3BQ9H195 1237 aa9.42□□□□□ -0.9
PDGFRA-206ENST00000508170 PLIN1O60240 522 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 ARID5AQ03989 594 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 CEP120Q8N960 986 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 RNF34Q969K3 372 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 PRKAB1Q9Y478 270 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 H3BRB1 525 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 VPS72Q15906 364 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 PPM1EQ8WY54 764 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 LRRC27Q9C0I9 530 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 ANAPC4Q9UJX5 808 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 LZTS1Q9Y250 596 aa9.41□□□□□ -0.9
PDGFRA-206ENST00000508170 BICDL2A1A5D9 508 aa9.4□□□□□ -0.9
PDGFRA-206ENST00000508170 COL19A1Q14993 1142 aa9.4□□□□□ -0.9
PDGFRA-206ENST00000508170 SAMD3Q8N6K7 520 aa9.4□□□□□ -0.9
PDGFRA-206ENST00000508170 IFT122Q9HBG6 1241 aa9.4□□□□□ -0.9
PDGFRA-206ENST00000508170 ATP9BO43861 1147 aa9.4□□□□□ -0.91
PDGFRA-206ENST00000508170 FAM200BP0CF97 657 aa9.4□□□□□ -0.91
PDGFRA-206ENST00000508170 CC2D1AQ6P1N0 951 aaPredicted RBP9.4□□□□□ -0.91
PDGFRA-206ENST00000508170 RELTQ969Z4 430 aa9.4□□□□□ -0.91
PDGFRA-206ENST00000508170 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 PPP1R12AO14974 1030 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 NDUFV2P19404 249 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 ATP2B4P23634 1241 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 MNX1P50219 401 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 PLEKHG4Q58EX7 1191 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 SNRNP27Q8WVK2 155 aaKnown RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 ZNF211Q13398 564 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 BRD3Q15059 726 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 SLFNL1Q499Z3 407 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 MCF2L2Q86YR7 1114 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 NGDNQ8NEJ9 315 aaKnown RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
PDGFRA-206ENST00000508170 NPHP1O15259 732 aa9.38□□□□□ -0.91
PDGFRA-206ENST00000508170 CBFA2T2O43439 604 aa9.38□□□□□ -0.91
PDGFRA-206ENST00000508170 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
PDGFRA-206ENST00000508170 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
PDGFRA-206ENST00000508170 METTL5Q9NRN9 209 aaKnown RBP9.38□□□□□ -0.91
PDGFRA-206ENST00000508170 DCTN4Q9UJW0 460 aa9.38□□□□□ -0.91
PDGFRA-206ENST00000508170 KIF3BO15066 747 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 ABL1P00519 1130 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 PSEN1P49768 467 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 RAPGEF1Q13905 1077 aa9.37□□□□□ -0.91
PDGFRA-206ENST00000508170 USP48Q86UV5 1035 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms