RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 NME9Q86XW9 330 aa7.6□□□□□ -1.19
KDM3B-204ENST00000507996 FYB1O15117 783 aa7.6□□□□□ -1.19
KDM3B-204ENST00000507996 XPCQ01831 940 aaPredicted RBP7.6□□□□□ -1.19
KDM3B-204ENST00000507996 ATF3P18847 181 aa7.59□□□□□ -1.19
KDM3B-204ENST00000507996 HMGN5P82970 282 aaKnown RBP7.59□□□□□ -1.19
KDM3B-204ENST00000507996 LMOD2Q6P5Q4 547 aa7.59□□□□□ -1.19
KDM3B-204ENST00000507996 XRN1Q8IZH2 1706 aaKnown RBP7.59□□□□□ -1.19
KDM3B-204ENST00000507996 PDE3AQ14432 1141 aa7.59□□□□□ -1.19
KDM3B-204ENST00000507996 ZNF710Q8N1W2 664 aa7.59□□□□□ -1.19
KDM3B-204ENST00000507996 ORAI2Q96SN7 254 aa7.59□□□□□ -1.19
KDM3B-204ENST00000507996 TMEM94Q12767 1356 aa7.59□□□□□ -1.2
KDM3B-204ENST00000507996 ATP7BP35670 1465 aa7.59□□□□□ -1.2
KDM3B-204ENST00000507996 IGHDP01880 384 aa7.58□□□□□ -1.2
KDM3B-204ENST00000507996 KLHL40Q2TBA0 621 aa7.58□□□□□ -1.2
KDM3B-204ENST00000507996 PAXIP1Q6ZW49 1069 aaPredicted RBP7.58□□□□□ -1.2
KDM3B-204ENST00000507996 CD163L1Q9NR16 1453 aa7.58□□□□□ -1.2
KDM3B-204ENST00000507996 MTHFSP49914 203 aa7.58□□□□□ -1.2
KDM3B-204ENST00000507996 TNPO1Q92973 898 aaKnown RBP7.58□□□□□ -1.2
KDM3B-204ENST00000507996 C19orf44Q9H6X5 657 aa7.58□□□□□ -1.2
KDM3B-204ENST00000507996 FOXO3O43524 673 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 PSME1Q06323 249 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 WDR43Q15061 677 aaKnown RBP eCLIP7.57□□□□□ -1.2
KDM3B-204ENST00000507996 PHF8Q9UPP1 1060 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 RGPD8O14715 1765 aaPredicted RBP7.57□□□□□ -1.2
KDM3B-204ENST00000507996 CCDC39Q9UFE4 941 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 U3KPZ7 1027 aaPredicted RBP7.57□□□□□ -1.2
KDM3B-204ENST00000507996 STRCP1A6NGW2 1772 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 PLEKHG3A1L390 1219 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 COG3Q96JB2 828 aa7.57□□□□□ -1.2
KDM3B-204ENST00000507996 GABPB1Q06547 395 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-204ENST00000507996 DDX17Q92841 729 aaKnown RBP7.56□□□□□ -1.2
KDM3B-204ENST00000507996 DNAJC2Q99543 621 aaKnown RBP7.56□□□□□ -1.2
KDM3B-204ENST00000507996 ADGRL3Q9HAR2 1447 aa7.56□□□□□ -1.2
KDM3B-204ENST00000507996 TTC21BQ7Z4L5 1316 aa7.56□□□□□ -1.2
KDM3B-204ENST00000507996 NALCNQ8IZF0 1738 aa7.56□□□□□ -1.2
KDM3B-204ENST00000507996 ZBTB7CA1YPR0 619 aa7.56□□□□□ -1.2
KDM3B-204ENST00000507996 SLFN5Q08AF3 891 aa7.56□□□□□ -1.2
KDM3B-204ENST00000507996 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
KDM3B-204ENST00000507996 FAM193AP78312 1265 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 RRS1Q15050 365 aaKnown RBP7.55□□□□□ -1.2
KDM3B-204ENST00000507996 ATP2B3Q16720 1220 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 HSCBQ8IWL3 235 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 ABTB2Q8N961 1025 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 ADAMTS8Q9UP79 889 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 NPC1L1Q9UHC9 1359 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 CPSF1Q10570 1443 aaKnown RBP7.55□□□□□ -1.2
KDM3B-204ENST00000507996 NLRP6P59044 892 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 CCDC146Q8IYE0 955 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 CLUAP1Q96AJ1 413 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 FEZ1Q99689 392 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 ADGRB2O60241 1585 aa7.55□□□□□ -1.2
KDM3B-204ENST00000507996 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
KDM3B-204ENST00000507996 CFAP53Q96M91 514 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 C22orf23Q9BZE7 217 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 MSH6P52701 1360 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 EDC4Q6P2E9 1401 aaKnown RBP7.54□□□□□ -1.2
KDM3B-204ENST00000507996 CDC42BPGQ6DT37 1551 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 TULP2O00295 520 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 MMP14P50281 582 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 IRX5P78411 483 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-204ENST00000507996 GOLGA2Q08379 1002 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 CADPS2Q86UW7 1296 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 ANKRD7Q92527 254 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 USP32Q8NFA0 1604 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 NGEFQ8N5V2 710 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 ZFP91Q96JP5 570 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-204ENST00000507996 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 EMILIN1Q9Y6C2 1016 aa7.54□□□□□ -1.2
KDM3B-204ENST00000507996 USP6P35125 1406 aa7.53□□□□□ -1.2
KDM3B-204ENST00000507996 ITSN1Q15811 1721 aa7.53□□□□□ -1.2
KDM3B-204ENST00000507996 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
KDM3B-204ENST00000507996 NSD2O96028 1365 aa7.53□□□□□ -1.2
KDM3B-204ENST00000507996 CBX1P83916 185 aa7.53□□□□□ -1.2
KDM3B-204ENST00000507996 U2AF1L5P0DN76 240 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-204ENST00000507996 IRX3P78415 501 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-204ENST00000507996 U2AF1Q01081 240 aaKnown RBP eCLIP7.52□□□□□ -1.211e-7■■■□□ 14.6
KDM3B-204ENST00000507996 FMN2Q9NZ56 1722 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 NWD1Q149M9 1564 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 ANKARQ7Z5J8 1434 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 CDK11BP21127 795 aaKnown RBP7.52□□□□□ -1.21
KDM3B-204ENST00000507996 KIAA2012Q0VF49 1180 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 SYCP1Q15431 976 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 NEUROD2Q15784 382 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 SAMD1Q6SPF0 538 aaPredicted RBP7.52□□□□□ -1.21
KDM3B-204ENST00000507996 KRT28Q7Z3Y7 464 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 CREBRFQ8IUR6 639 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 POLKQ9UBT6 870 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 GOLGA6L22H0YM25 854 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 SPTLC3Q9NUV7 552 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 OGFRQ9NZT2 677 aa7.52□□□□□ -1.21
KDM3B-204ENST00000507996 CCDC66A2RUB6 948 aa7.51□□□□□ -1.21
KDM3B-204ENST00000507996 VGLL3A8MV65 326 aa7.51□□□□□ -1.21
KDM3B-204ENST00000507996 DNTTIP2Q5QJE6 756 aaKnown RBP7.51□□□□□ -1.21
KDM3B-204ENST00000507996 C1orf167Q5SNV9 1468 aa7.51□□□□□ -1.21
KDM3B-204ENST00000507996 POLR3AO14802 1390 aaPredicted RBP7.51□□□□□ -1.21
KDM3B-204ENST00000507996 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
KDM3B-204ENST00000507996 SLAIN2Q9P270 581 aa7.51□□□□□ -1.21
KDM3B-204ENST00000507996 KIF20BQ96Q89 1820 aa7.5□□□□□ -1.21
KDM3B-204ENST00000507996 AMPHP49418 695 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms