RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 NUP160Q12769 1436 aa13.14□□□□□ -0.31
PFDN1-202ENST00000507185 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
PFDN1-202ENST00000507185 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-202ENST00000507185 BMP2P12643 396 aa13.13□□□□□ -0.31
PFDN1-202ENST00000507185 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
PFDN1-202ENST00000507185 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
PFDN1-202ENST00000507185 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
PFDN1-202ENST00000507185 NXF1Q9UBU9 619 aaKnown RBP13.13□□□□□ -0.31
PFDN1-202ENST00000507185 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
PFDN1-202ENST00000507185 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
PFDN1-202ENST00000507185 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
PFDN1-202ENST00000507185 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-202ENST00000507185 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
PFDN1-202ENST00000507185 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
PFDN1-202ENST00000507185 SLC16A10Q8TF71 515 aa13.1□□□□□ -0.31
PFDN1-202ENST00000507185 TSEN34Q9BSV6 310 aaKnown RBP13.1□□□□□ -0.31
PFDN1-202ENST00000507185 MAN1A2O60476 641 aa13.08□□□□□ -0.32
PFDN1-202ENST00000507185 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
PFDN1-202ENST00000507185 ZBBXA8MT70 800 aa13.07□□□□□ -0.32
PFDN1-202ENST00000507185 RAB15P59190 212 aa13.07□□□□□ -0.32
PFDN1-202ENST00000507185 CBLBQ13191 982 aa13.07□□□□□ -0.32
PFDN1-202ENST00000507185 NPAS3Q8IXF0 933 aa13.06□□□□□ -0.32
PFDN1-202ENST00000507185 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
PFDN1-202ENST00000507185 Q6ZVU0 165 aa13.05□□□□□ -0.32
PFDN1-202ENST00000507185 APBB1O00213 710 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 SOCS7O14512 581 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 FBXO45P0C2W1 286 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 VEGFBP49765 207 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 PCDHB9Q9Y5E1 797 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 ABCC10Q5T3U5 1492 aa13.03□□□□□ -0.32
PFDN1-202ENST00000507185 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
PFDN1-202ENST00000507185 SOS2Q07890 1332 aaPredicted RBP13.02□□□□□ -0.33
PFDN1-202ENST00000507185 SHROOM2Q13796 1616 aa13.02□□□□□ -0.33
PFDN1-202ENST00000507185 ERVH48-1M5A8F1 160 aa13.01□□□□□ -0.33
PFDN1-202ENST00000507185 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
PFDN1-202ENST00000507185 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
PFDN1-202ENST00000507185 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
PFDN1-202ENST00000507185 ESPNB1AK53 854 aa13□□□□□ -0.33
PFDN1-202ENST00000507185 WIPF1O43516 503 aa13□□□□□ -0.33
PFDN1-202ENST00000507185 LCE2CQ5TA81 110 aa13□□□□□ -0.33
PFDN1-202ENST00000507185 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
PFDN1-202ENST00000507185 IRF7Q92985 503 aa13□□□□□ -0.33
PFDN1-202ENST00000507185 TTLL8A6PVC2 850 aa12.99□□□□□ -0.33
PFDN1-202ENST00000507185 H3BM21 787 aa12.99□□□□□ -0.33
PFDN1-202ENST00000507185 ZNF784Q8NCA9 323 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-202ENST00000507185 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
PFDN1-202ENST00000507185 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
PFDN1-202ENST00000507185 RELBQ01201 579 aa12.98□□□□□ -0.33
PFDN1-202ENST00000507185 NR1H3Q13133 447 aa12.98□□□□□ -0.33
PFDN1-202ENST00000507185 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
PFDN1-202ENST00000507185 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
PFDN1-202ENST00000507185 SPINT1O43278 529 aa12.97□□□□□ -0.33
PFDN1-202ENST00000507185 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
PFDN1-202ENST00000507185 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
PFDN1-202ENST00000507185 KDM6BO15054 1643 aa12.96□□□□□ -0.33
PFDN1-202ENST00000507185 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-202ENST00000507185 KIF13AQ9H1H9 1805 aa12.96□□□□□ -0.33
PFDN1-202ENST00000507185 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
PFDN1-202ENST00000507185 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.95□□□□□ -0.34
PFDN1-202ENST00000507185 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
PFDN1-202ENST00000507185 ARXQ96QS3 562 aa12.95□□□□□ -0.34
PFDN1-202ENST00000507185 MAPKBP1O60336 1514 aa12.94□□□□□ -0.34
PFDN1-202ENST00000507185 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
PFDN1-202ENST00000507185 LILRA1O75019 489 aa12.94□□□□□ -0.34
PFDN1-202ENST00000507185 INSM1Q01101 510 aaPredicted RBP12.94□□□□□ -0.34
PFDN1-202ENST00000507185 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
PFDN1-202ENST00000507185 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
PFDN1-202ENST00000507185 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
PFDN1-202ENST00000507185 PRM3Q9NNZ6 103 aa12.93□□□□□ -0.34
PFDN1-202ENST00000507185 ADH1AP07327 375 aa12.92□□□□□ -0.34
PFDN1-202ENST00000507185 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
PFDN1-202ENST00000507185 GMPRP36959 345 aa12.92□□□□□ -0.34
PFDN1-202ENST00000507185 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
PFDN1-202ENST00000507185 INSM2Q96T92 566 aaPredicted RBP12.92□□□□□ -0.34
PFDN1-202ENST00000507185 ZNF395Q9H8N7 513 aaPredicted RBP12.92□□□□□ -0.34
PFDN1-202ENST00000507185 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
PFDN1-202ENST00000507185 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
PFDN1-202ENST00000507185 PTPRGP23470 1445 aa12.91□□□□□ -0.34
PFDN1-202ENST00000507185 GPR37L1O60883 481 aa12.91□□□□□ -0.34
PFDN1-202ENST00000507185 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
PFDN1-202ENST00000507185 POLMQ9NP87 494 aaPredicted RBP12.91□□□□□ -0.34
PFDN1-202ENST00000507185 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
PFDN1-202ENST00000507185 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
PFDN1-202ENST00000507185 CTSOP43234 321 aaPredicted RBP12.9□□□□□ -0.34
PFDN1-202ENST00000507185 PTGIRP43119 386 aa12.89□□□□□ -0.35
PFDN1-202ENST00000507185 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
PFDN1-202ENST00000507185 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
PFDN1-202ENST00000507185 PTSQ03393 145 aa12.87□□□□□ -0.35
PFDN1-202ENST00000507185 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
PFDN1-202ENST00000507185 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
PFDN1-202ENST00000507185 IGF1RP08069 1367 aa12.85□□□□□ -0.35
PFDN1-202ENST00000507185 KDF1Q8NAX2 398 aaPredicted RBP12.85□□□□□ -0.35
PFDN1-202ENST00000507185 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
PFDN1-202ENST00000507185 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
PFDN1-202ENST00000507185 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
PFDN1-202ENST00000507185 ASXL2Q76L83 1435 aa12.84□□□□□ -0.35
PFDN1-202ENST00000507185 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
PFDN1-202ENST00000507185 TNIKQ9UKE5 1360 aa12.83□□□□□ -0.36
PFDN1-202ENST00000507185 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms