RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 IFT172Q9UG01 1749 aa7□□□□□ -1.29
CPNE4-207ENST00000506687 CLSPNQ9HAW4 1339 aa7□□□□□ -1.29
CPNE4-207ENST00000506687 NRXN3Q9Y4C0 1643 aa6.99□□□□□ -1.29
CPNE4-207ENST00000506687 BRD1O95696 1058 aa6.99□□□□□ -1.29
CPNE4-207ENST00000506687 GOLGA2Q08379 1002 aa6.99□□□□□ -1.29
CPNE4-207ENST00000506687 TNS4Q8IZW8 715 aa6.99□□□□□ -1.29
CPNE4-207ENST00000506687 FARP1Q9Y4F1 1045 aaPredicted RBP6.99□□□□□ -1.29
CPNE4-207ENST00000506687 CAMTA1Q9Y6Y1 1673 aa6.99□□□□□ -1.29
CPNE4-207ENST00000506687 CHD2O14647 1828 aaKnown RBP6.99□□□□□ -1.29
CPNE4-207ENST00000506687 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-207ENST00000506687 CLCN1P35523 988 aa6.98□□□□□ -1.29
CPNE4-207ENST00000506687 MDM2Q00987 491 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-207ENST00000506687 CCDC27Q2M243 656 aa6.98□□□□□ -1.29
CPNE4-207ENST00000506687 L3MBTL2Q969R5 705 aa6.98□□□□□ -1.29
CPNE4-207ENST00000506687 C14orf93Q9H972 538 aaKnown RBP6.98□□□□□ -1.29
CPNE4-207ENST00000506687 C1orf167Q5SNV9 1468 aa6.98□□□□□ -1.29
CPNE4-207ENST00000506687 COL22A1Q8NFW1 1626 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-207ENST00000506687 METP08581 1390 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 PIK3C2GO75747 1445 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 APBA3O96018 575 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 MAP3K9P80192 1104 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 KIF12Q96FN5 646 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 SYT17Q9BSW7 474 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 RBM42Q9BTD8 480 aaKnown RBP6.97□□□□□ -1.29
CPNE4-207ENST00000506687 BEGAINQ9BUH8 593 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 GDPD2Q9HCC8 539 aa6.97□□□□□ -1.29
CPNE4-207ENST00000506687 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.96□□□□□ -1.29
CPNE4-207ENST00000506687 PTPRUQ92729 1446 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 ADGRL3Q9HAR2 1447 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 PITPNM1O00562 1244 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 BANK1Q8NDB2 785 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 ORAI2Q96SN7 254 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPNE4-207ENST00000506687 TMUB1Q9BVT8 246 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 LAMC1P11047 1609 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 UTRNP46939 3433 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 NPHP3Q7Z494 1330 aa6.96□□□□□ -1.3
CPNE4-207ENST00000506687 POM121CA8CG34 1229 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 RFC5P40937 340 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 PTGDRQ13258 359 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 FAM98CQ17RN3 349 aaKnown RBP6.95□□□□□ -1.3
CPNE4-207ENST00000506687 CFAP70Q5T0N1 1121 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 FAM182BQ5T319 152 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 DDX12PQ92771 950 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 GLMNQ92990 594 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-207ENST00000506687 ADGRB2O60241 1585 aa6.95□□□□□ -1.3
CPNE4-207ENST00000506687 PRAG1Q86YV5 1406 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 TBC1D12O60347 775 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 TRIM37O94972 964 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 RFX1P22670 979 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 PTGER2P43116 358 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 FAM196AQ6ZSG2 479 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 PBXIP1Q96AQ6 731 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 IVNS1ABPQ9Y6Y0 642 aa6.94□□□□□ -1.3
CPNE4-207ENST00000506687 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 BRWD3Q6RI45 1802 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 CARNS1A5YM72 827 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 PAK3O75914 559 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-207ENST00000506687 ABL2P42684 1182 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 FOXK1P85037 733 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 GPR162Q16538 588 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 TMEM132EQ6IEE7 984 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 CCER1Q8TC90 406 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-207ENST00000506687 TMC2Q8TDI7 906 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 SIRT1Q96EB6 747 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 ADGRB1O14514 1584 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 ABCC11Q96J66 1382 aa6.93□□□□□ -1.3
CPNE4-207ENST00000506687 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-207ENST00000506687 EIF5BO60841 1220 aaKnown RBP6.92□□□□□ -1.3
CPNE4-207ENST00000506687 PRIM1P49642 420 aaKnown RBP6.92□□□□□ -1.3
CPNE4-207ENST00000506687 CLK2P49760 499 aaKnown RBP6.92□□□□□ -1.3
CPNE4-207ENST00000506687 APLP1P51693 650 aa6.92□□□□□ -1.3
CPNE4-207ENST00000506687 NBPF1Q3BBV0 1214 aa6.92□□□□□ -1.3
CPNE4-207ENST00000506687 PLPP6Q8IY26 295 aa6.92□□□□□ -1.3
CPNE4-207ENST00000506687 DNAJC5GQ8N7S2 189 aa6.92□□□□□ -1.3
CPNE4-207ENST00000506687 USTQ9Y2C2 406 aa6.92□□□□□ -1.3
CPNE4-207ENST00000506687 XRN1Q8IZH2 1706 aaKnown RBP6.92□□□□□ -1.3
CPNE4-207ENST00000506687 LRPPRCP42704 1394 aaKnown RBP6.92□□□□□ -1.3
CPNE4-207ENST00000506687 TECPR2O15040 1411 aa6.92□□□□□ -1.3
CPNE4-207ENST00000506687 NRKQ7Z2Y5 1582 aa6.91□□□□□ -1.3
CPNE4-207ENST00000506687 KIAA1210Q9ULL0 1709 aa6.91□□□□□ -1.3
CPNE4-207ENST00000506687 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
CPNE4-207ENST00000506687 TMEM259Q4ZIN3 620 aa6.91□□□□□ -1.3
CPNE4-207ENST00000506687 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPNE4-207ENST00000506687 MTMR14Q8NCE2 650 aa6.91□□□□□ -1.3
CPNE4-207ENST00000506687 ROBO2Q9HCK4 1378 aa6.91□□□□□ -1.3
CPNE4-207ENST00000506687 YTHDC2Q9H6S0 1430 aaKnown RBP6.91□□□□□ -1.3
CPNE4-207ENST00000506687 PHOX2BQ99453 314 aa6.9□□□□□ -1.3
CPNE4-207ENST00000506687 TMEM106CQ9BVX2 250 aa6.9□□□□□ -1.3
CPNE4-207ENST00000506687 GPRASP1Q5JY77 1395 aa6.9□□□□□ -1.31
CPNE4-207ENST00000506687 AATKQ6ZMQ8 1374 aa6.9□□□□□ -1.31
CPNE4-207ENST00000506687 TONSLQ96HA7 1378 aa6.9□□□□□ -1.31
CPNE4-207ENST00000506687 DLC1Q96QB1 1528 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms