RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ATP13A2Q9NQ11 1180 aa5.46□□□□□ -1.54
TRAPPC11-205ENST00000506426 TERTO14746 1132 aaKnown RBP5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 RPIAP49247 311 aa5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 PTK7Q13308 1070 aa5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 SH3BP5LQ7L8J4 393 aa5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 TRIM50Q86XT4 487 aa5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 ANKMY2Q8IV38 441 aa5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 CHIC2Q9UKJ5 165 aa5.45□□□□□ -1.54
TRAPPC11-205ENST00000506426 ARID4AP29374 1257 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 ATP1A2P50993 1020 aa5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 FOXD4L5Q5VV16 416 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 PTCRAQ6ISU1 281 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 FOXD4L4Q8WXT5 416 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 HPS1Q92902 700 aa5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 NOD1Q9Y239 953 aa5.44□□□□□ -1.54
TRAPPC11-205ENST00000506426 SSFA2P28290 1259 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 INSM1Q01101 510 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 AGERQ15109 404 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 CTC1Q2NKJ3 1217 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 RNF20Q5VTR2 975 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 TXNDC2Q86VQ3 553 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 BPHLQ86WA6 291 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 OGFOD1Q8N543 542 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 CLP1Q92989 425 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 MRGPRX2Q96LB1 330 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 DNAAF2Q9NVR5 837 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 DOLKQ9UPQ8 538 aa5.43□□□□□ -1.54
TRAPPC11-205ENST00000506426 MAGEB6P1A0A0J9YX57 407 aa5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 DPYDQ12882 1025 aa5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 TSGA10IPQ3SY00 556 aa5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 LARGE2Q8N3Y3 721 aa5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 BAP1Q92560 729 aa5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 CARD14Q9BXL6 1004 aa5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 RBM19Q9Y4C8 960 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-205ENST00000506426 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 GIGYF1O75420 1035 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 RBM25P49756 843 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 VEGFBP49765 207 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 FAM69CQ0P6D2 419 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 SWI5Q1ZZU3 235 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 PHLDB3Q6NSJ2 640 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 SH3RF1Q7Z6J0 888 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 CCDC125Q86Z20 511 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 SIRT1Q96EB6 747 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 ZNF594Q96JF6 807 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 TRIM47Q96LD4 638 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 AMOTL2Q9Y2J4 779 aa5.41□□□□□ -1.54
TRAPPC11-205ENST00000506426 ATP2B4P23634 1241 aa5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 CLDN10P78369 228 aa5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 ERFEQ4G0M1 354 aa5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 OXLD1Q5BKU9 147 aa5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 ZNF511Q8NB15 262 aa5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 SNIP1Q8TAD8 396 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 SLC10A4Q96EP9 437 aa5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 CCDC85AQ96PX6 553 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-205ENST00000506426 WNT7AO00755 349 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 ZBTB7BO15156 539 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 GMPRP36959 345 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 SEC13P55735 322 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 GTF2IP78347 998 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 TRIM32Q13049 653 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 USP4Q13107 963 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 NBPF20Q3BBV1 942 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 LINC01559Q495D7 138 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 SIX5Q8N196 739 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 FOXJ1Q92949 421 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 SLAIN2Q9P270 581 aa5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 CDV3Q9UKY7 258 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-205ENST00000506426 E9PSI1 815 aa5.38□□□□□ -1.55
TRAPPC11-205ENST00000506426 ZBTB24O43167 697 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-205ENST00000506426 CCDC102BQ68D86 513 aa5.38□□□□□ -1.55
TRAPPC11-205ENST00000506426 SEPT12Q8IYM1 358 aa5.38□□□□□ -1.55
TRAPPC11-205ENST00000506426 C1orf216Q8TAB5 229 aa5.38□□□□□ -1.55
TRAPPC11-205ENST00000506426 DKK1O94907 266 aa5.37□□□□□ -1.55
TRAPPC11-205ENST00000506426 BMP1P13497 986 aa5.37□□□□□ -1.55
TRAPPC11-205ENST00000506426 PSME1Q06323 249 aa5.37□□□□□ -1.55
TRAPPC11-205ENST00000506426 C4orf48Q5BLP8 95 aa5.37□□□□□ -1.55
TRAPPC11-205ENST00000506426 C1QTNF2Q9BXJ5 285 aa5.37□□□□□ -1.55
TRAPPC11-205ENST00000506426 PCDHB11Q9Y5F2 797 aa5.37□□□□□ -1.55
TRAPPC11-205ENST00000506426 SOWAHDA6NJG2 315 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 ESPNB1AK53 854 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 PRMT3O60678 531 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 ERCC3P19447 782 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 SH3BP2P78314 561 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 SKOR1P84550 965 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 TRMT44Q8IYL2 757 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 TPCN2Q8NHX9 752 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 ZNF428Q96B54 188 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 KIAA1024Q9UPX6 916 aa5.36□□□□□ -1.55
TRAPPC11-205ENST00000506426 ERBB4Q15303 1308 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 SFI1A8K8P3 1242 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 MYCP01106 439 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 SERPINB4P48594 390 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 TRIM52Q96A61 297 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 PRIMPOLQ96LW4 560 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 HINFPQ9BQA5 517 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 ESF1Q9H501 851 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms