RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
CHD1-204ENST00000505982 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
CHD1-204ENST00000505982 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
CHD1-204ENST00000505982 WHAMMQ8TF30 809 aa11.23□□□□□ -0.61
CHD1-204ENST00000505982 APBB1O00213 710 aa11.22□□□□□ -0.61
CHD1-204ENST00000505982 LILRA1O75019 489 aa11.22□□□□□ -0.61
CHD1-204ENST00000505982 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
CHD1-204ENST00000505982 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
CHD1-204ENST00000505982 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
CHD1-204ENST00000505982 MARSP56192 900 aaKnown RBP11.21□□□□□ -0.61
CHD1-204ENST00000505982 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
CHD1-204ENST00000505982 LYSMD3Q7Z3D4 306 aa11.21□□□□□ -0.61
CHD1-204ENST00000505982 A6NJR5 290 aa11.2□□□□□ -0.62
CHD1-204ENST00000505982 RAD21O60216 631 aa11.2□□□□□ -0.62
CHD1-204ENST00000505982 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
CHD1-204ENST00000505982 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
CHD1-204ENST00000505982 ESPNB1AK53 854 aa11.19□□□□□ -0.62
CHD1-204ENST00000505982 ADAMTS2O95450 1211 aa11.18□□□□□ -0.62
CHD1-204ENST00000505982 IRS1P35568 1242 aa11.18□□□□□ -0.62
CHD1-204ENST00000505982 RFC5P40937 340 aa11.18□□□□□ -0.62
CHD1-204ENST00000505982 SRSF11Q05519 484 aaKnown RBP11.18□□□□□ -0.62
CHD1-204ENST00000505982 KDF1Q8NAX2 398 aaPredicted RBP11.18□□□□□ -0.62
CHD1-204ENST00000505982 SCARF2Q96GP6 870 aaPredicted RBP11.18□□□□□ -0.62
CHD1-204ENST00000505982 C1orf115Q9H7X2 142 aa11.17□□□□□ -0.62
CHD1-204ENST00000505982 TRAK2O60296 914 aa11.16□□□□□ -0.62
CHD1-204ENST00000505982 RNF144AP50876 292 aaPredicted RBP11.16□□□□□ -0.62
CHD1-204ENST00000505982 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
CHD1-204ENST00000505982 KANK3Q6NY19 840 aa11.16□□□□□ -0.62
CHD1-204ENST00000505982 DNMT3AQ9Y6K1 912 aaPredicted RBP11.16□□□□□ -0.62
CHD1-204ENST00000505982 PRICKLE2Q7Z3G6 844 aa11.15□□□□□ -0.62
CHD1-204ENST00000505982 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
CHD1-204ENST00000505982 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
CHD1-204ENST00000505982 LYPD4Q6UWN0 246 aa11.14□□□□□ -0.63
CHD1-204ENST00000505982 PROSER2Q86WR7 435 aaPredicted RBP11.14□□□□□ -0.63
CHD1-204ENST00000505982 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
CHD1-204ENST00000505982 GMCL1Q96IK5 515 aa11.14□□□□□ -0.63
CHD1-204ENST00000505982 ENAMQ9NRM1 1142 aa11.13□□□□□ -0.63
CHD1-204ENST00000505982 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
CHD1-204ENST00000505982 IGHA1P01876 353 aa11.12□□□□□ -0.63
CHD1-204ENST00000505982 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
CHD1-204ENST00000505982 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
CHD1-204ENST00000505982 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
CHD1-204ENST00000505982 CUEDC1Q9NWM3 386 aaPredicted RBP11.12□□□□□ -0.63
CHD1-204ENST00000505982 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
CHD1-204ENST00000505982 RHOQP17081 205 aa11.11□□□□□ -0.63
CHD1-204ENST00000505982 FOXK2Q01167 660 aa11.11□□□□□ -0.63
CHD1-204ENST00000505982 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
CHD1-204ENST00000505982 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
CHD1-204ENST00000505982 ZBBXA8MT70 800 aa11.1□□□□□ -0.63
CHD1-204ENST00000505982 GPC1P35052 558 aa11.1□□□□□ -0.63
CHD1-204ENST00000505982 GAS6Q14393 721 aa11.1□□□□□ -0.63
CHD1-204ENST00000505982 TRIM22Q8IYM9 498 aa11.1□□□□□ -0.63
CHD1-204ENST00000505982 GIGYF1O75420 1035 aaPredicted RBP11.09□□□□□ -0.63
CHD1-204ENST00000505982 ZNF837Q96EG3 531 aaPredicted RBP11.09□□□□□ -0.63
CHD1-204ENST00000505982 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
CHD1-204ENST00000505982 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
CHD1-204ENST00000505982 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
CHD1-204ENST00000505982 MEN1O00255 615 aa11.08□□□□□ -0.64
CHD1-204ENST00000505982 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
CHD1-204ENST00000505982 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
CHD1-204ENST00000505982 H7C1W4 665 aa11.07□□□□□ -0.64
CHD1-204ENST00000505982 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
CHD1-204ENST00000505982 RIPOR1Q6ZS17 1223 aa11.07□□□□□ -0.64
CHD1-204ENST00000505982 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
CHD1-204ENST00000505982 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
CHD1-204ENST00000505982 DYRK1BQ9Y463 629 aa11.06□□□□□ -0.64
CHD1-204ENST00000505982 DBN1Q16643 649 aa11.05□□□□□ -0.64
CHD1-204ENST00000505982 SLC27A3Q5K4L6 730 aa11.05□□□□□ -0.64
CHD1-204ENST00000505982 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
CHD1-204ENST00000505982 NLRP3Q96P20 1036 aa11.05□□□□□ -0.64
CHD1-204ENST00000505982 MCCD1P59942 119 aaPredicted RBP11.04□□□□□ -0.64
CHD1-204ENST00000505982 PRM3Q9NNZ6 103 aa11.04□□□□□ -0.64
CHD1-204ENST00000505982 IGF1RP08069 1367 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 PHF20L1A8MW92 1017 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 GPR25O00155 361 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 FBXO45P0C2W1 286 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 ERVK-9P63128 1117 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
CHD1-204ENST00000505982 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
CHD1-204ENST00000505982 POU4F2Q12837 409 aa11.02□□□□□ -0.65
CHD1-204ENST00000505982 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.65
CHD1-204ENST00000505982 MTMR14Q8NCE2 650 aa11.02□□□□□ -0.65
CHD1-204ENST00000505982 ZNF592Q92610 1267 aa11.02□□□□□ -0.65
CHD1-204ENST00000505982 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
CHD1-204ENST00000505982 BCRP11274 1271 aa11.01□□□□□ -0.65
CHD1-204ENST00000505982 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
CHD1-204ENST00000505982 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
CHD1-204ENST00000505982 NEDD1Q8NHV4 660 aa11.01□□□□□ -0.65
CHD1-204ENST00000505982 CCDC97Q96F63 343 aaPredicted RBP11.01□□□□□ -0.65
CHD1-204ENST00000505982 ESF1Q9H501 851 aaKnown RBP11.01□□□□□ -0.65
CHD1-204ENST00000505982 GDPD2Q9HCC8 539 aa11.01□□□□□ -0.65
CHD1-204ENST00000505982 PODNQ7Z5L7 613 aa11□□□□□ -0.65
CHD1-204ENST00000505982 GTPBP3Q969Y2 492 aaKnown RBP11□□□□□ -0.65
CHD1-204ENST00000505982 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
CHD1-204ENST00000505982 GRIP2Q9C0E4 1043 aa11□□□□□ -0.65
CHD1-204ENST00000505982 ABL2P42684 1182 aa10.99□□□□□ -0.65
CHD1-204ENST00000505982 CLN3Q13286 438 aa10.99□□□□□ -0.65
CHD1-204ENST00000505982 WDR44Q5JSH3 913 aa10.99□□□□□ -0.65
CHD1-204ENST00000505982 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 339.1 ms