RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 POLKQ9UBT6 870 aa15.17■□□□□ 0.02
SGCA-205ENST00000505964 NFAT5O94916 1531 aa15.17■□□□□ 0.02
SGCA-205ENST00000505964 COL3A1P02461 1466 aaPredicted RBP15.16■□□□□ 0.02
SGCA-205ENST00000505964 PROM2Q8N271 834 aa15.16■□□□□ 0.02
SGCA-205ENST00000505964 KCNH5Q8NCM2 988 aa15.16■□□□□ 0.02
SGCA-205ENST00000505964 PTGER2P43116 358 aa15.15■□□□□ 0.02
SGCA-205ENST00000505964 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
SGCA-205ENST00000505964 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
SGCA-205ENST00000505964 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
SGCA-205ENST00000505964 SENP3-EIF4A1A0A087X0R7 540 aa15.13■□□□□ 0.01
SGCA-205ENST00000505964 FHDC1Q9C0D6 1143 aaPredicted RBP15.13■□□□□ 0.01
SGCA-205ENST00000505964 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
SGCA-205ENST00000505964 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 FLT4P35916 1363 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 FBLN1P23142 703 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 RRS1Q15050 365 aaKnown RBP15.11■□□□□ 0.01
SGCA-205ENST00000505964 TXNRD1Q16881 649 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 SYT17Q9BSW7 474 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 STK32BQ9NY57 414 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 AXIN2Q9Y2T1 843 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 ABCC6O95255 1503 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 MAP3K19Q56UN5 1328 aa15.11■□□□□ 0.01
SGCA-205ENST00000505964 SOX12O15370 315 aa15.1■□□□□ 0.01
SGCA-205ENST00000505964 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
SGCA-205ENST00000505964 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
SGCA-205ENST00000505964 BTAF1O14981 1849 aa15.09■□□□□ 0.01
SGCA-205ENST00000505964 SLC15A2Q16348 729 aa15.09■□□□□ 0.01
SGCA-205ENST00000505964 WDR17Q8IZU2 1322 aa15.09■□□□□ 0.01
SGCA-205ENST00000505964 NHSQ6T4R5 1651 aa15.09■□□□□ 0.01
SGCA-205ENST00000505964 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
SGCA-205ENST00000505964 AMPHP49418 695 aa15.07■□□□□ 0
SGCA-205ENST00000505964 ARHGEF25Q86VW2 580 aa15.07■□□□□ 0
SGCA-205ENST00000505964 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
SGCA-205ENST00000505964 CSB-PGBD3P0DP91 1061 aa15.06■□□□□ 0
SGCA-205ENST00000505964 HOXC9P31274 260 aa15.06■□□□□ 0
SGCA-205ENST00000505964 IL13P35225 146 aa15.06■□□□□ 0
SGCA-205ENST00000505964 C1QTNF8P60827 252 aa15.06■□□□□ 0
SGCA-205ENST00000505964 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
SGCA-205ENST00000505964 MTFR1LQ9H019 292 aa15.06■□□□□ 0
SGCA-205ENST00000505964 BCL9O00512 1426 aa15.06■□□□□ 0
SGCA-205ENST00000505964 PAPPAQ13219 1627 aa15.06■□□□□ 0
SGCA-205ENST00000505964 IP6K1Q92551 441 aa15.05■□□□□ -0
SGCA-205ENST00000505964 ACSBG1Q96GR2 724 aa15.05■□□□□ -0
SGCA-205ENST00000505964 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
SGCA-205ENST00000505964 FAM208AQ9UK61 1670 aaKnown RBP15.05■□□□□ -0
SGCA-205ENST00000505964 TUBGCP6Q96RT7 1819 aa15.05■□□□□ -0
SGCA-205ENST00000505964 HSP90AB2PQ58FF8 381 aa15.04■□□□□ -0
SGCA-205ENST00000505964 TNS2Q63HR2 1409 aa15.03■□□□□ -0
SGCA-205ENST00000505964 EXOC5O00471 708 aa15.03■□□□□ -0
SGCA-205ENST00000505964 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
SGCA-205ENST00000505964 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
SGCA-205ENST00000505964 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
SGCA-205ENST00000505964 ARXQ96QS3 562 aa15.03■□□□□ -0
SGCA-205ENST00000505964 CDCA7Q9BWT1 371 aaPredicted RBP15.03■□□□□ -0
SGCA-205ENST00000505964 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
SGCA-205ENST00000505964 PNNQ9H307 717 aaKnown RBP15.03■□□□□ -0
SGCA-205ENST00000505964 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
SGCA-205ENST00000505964 KLHL34Q8N239 644 aa15.02■□□□□ -0
SGCA-205ENST00000505964 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
SGCA-205ENST00000505964 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
SGCA-205ENST00000505964 FCHSD2O94868 740 aa15.01□□□□□ -0.01
SGCA-205ENST00000505964 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
SGCA-205ENST00000505964 GPR162Q16538 588 aa15□□□□□ -0.01
SGCA-205ENST00000505964 ZNF827Q17R98 1081 aa15□□□□□ -0.01
SGCA-205ENST00000505964 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
SGCA-205ENST00000505964 RUNDC1Q96C34 613 aa15□□□□□ -0.01
SGCA-205ENST00000505964 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
SGCA-205ENST00000505964 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
SGCA-205ENST00000505964 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
SGCA-205ENST00000505964 IGSF1Q8N6C5 1336 aa14.98□□□□□ -0.01
SGCA-205ENST00000505964 SHANK3Q9BYB0 1731 aa14.98□□□□□ -0.01
SGCA-205ENST00000505964 KDRP35968 1356 aa14.98□□□□□ -0.01
SGCA-205ENST00000505964 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
SGCA-205ENST00000505964 LRRC4BQ9NT99 713 aa14.97□□□□□ -0.01
SGCA-205ENST00000505964 NCAPD2Q15021 1401 aa14.97□□□□□ -0.01
SGCA-205ENST00000505964 DLG5Q8TDM6 1919 aa14.97□□□□□ -0.01
SGCA-205ENST00000505964 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
SGCA-205ENST00000505964 MAP3K5Q99683 1374 aa14.97□□□□□ -0.01
SGCA-205ENST00000505964 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
SGCA-205ENST00000505964 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
SGCA-205ENST00000505964 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
SGCA-205ENST00000505964 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
SGCA-205ENST00000505964 EYA1Q99502 592 aa14.95□□□□□ -0.02
SGCA-205ENST00000505964 NLRP2Q9NX02 1062 aa14.95□□□□□ -0.02
SGCA-205ENST00000505964 ERBB3P21860 1342 aa14.94□□□□□ -0.02
SGCA-205ENST00000505964 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
SGCA-205ENST00000505964 NEFMP07197 916 aa14.94□□□□□ -0.02
SGCA-205ENST00000505964 IFFO2Q5TF58 517 aa14.94□□□□□ -0.02
SGCA-205ENST00000505964 SULT6B1Q6IMI4 303 aa14.94□□□□□ -0.02
SGCA-205ENST00000505964 ANKRD24Q8TF21 1146 aa14.94□□□□□ -0.02
SGCA-205ENST00000505964 DOT1LQ8TEK3 1739 aa14.93□□□□□ -0.02
SGCA-205ENST00000505964 APAF1O14727 1248 aa14.93□□□□□ -0.02
SGCA-205ENST00000505964 HMOX1P09601 288 aa14.93□□□□□ -0.02
SGCA-205ENST00000505964 PRKAR2BP31323 418 aa14.93□□□□□ -0.02
SGCA-205ENST00000505964 KCNQ4P56696 695 aa14.93□□□□□ -0.02
SGCA-205ENST00000505964 NLGN2Q8NFZ4 835 aa14.93□□□□□ -0.02
SGCA-205ENST00000505964 IL2RBP14784 551 aa14.92□□□□□ -0.02
SGCA-205ENST00000505964 LTV1Q96GA3 475 aaPredicted RBP14.92□□□□□ -0.02
SGCA-205ENST00000505964 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms