RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
RFC1-210ENST00000505077 TRPC5Q9UL62 973 aaPredicted RBP13.65□□□□□ -0.22
RFC1-210ENST00000505077 OVOS2A0A0G2JMS6 1433 aa13.64□□□□□ -0.23
RFC1-210ENST00000505077 MEGF6O75095 1541 aa13.64□□□□□ -0.23
RFC1-210ENST00000505077 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 NEFMP07197 916 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 SULT6B1Q6IMI4 303 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 TCP11L2Q8N4U5 519 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 RSPH6AQ9H0K4 717 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
RFC1-210ENST00000505077 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
RFC1-210ENST00000505077 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
RFC1-210ENST00000505077 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
RFC1-210ENST00000505077 IL2RBP14784 551 aa13.61□□□□□ -0.23
RFC1-210ENST00000505077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.61□□□□□ -0.234e-7■■■■□ 20.9
RFC1-210ENST00000505077 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
RFC1-210ENST00000505077 SBF2Q86WG5 1849 aa13.61□□□□□ -0.23
RFC1-210ENST00000505077 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
RFC1-210ENST00000505077 ITGB4P16144 1822 aa13.6□□□□□ -0.23
RFC1-210ENST00000505077 HMOX1P09601 288 aa13.6□□□□□ -0.23
RFC1-210ENST00000505077 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
RFC1-210ENST00000505077 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
RFC1-210ENST00000505077 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
RFC1-210ENST00000505077 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
RFC1-210ENST00000505077 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
RFC1-210ENST00000505077 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
RFC1-210ENST00000505077 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
RFC1-210ENST00000505077 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
RFC1-210ENST00000505077 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
RFC1-210ENST00000505077 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
RFC1-210ENST00000505077 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
RFC1-210ENST00000505077 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
RFC1-210ENST00000505077 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
RFC1-210ENST00000505077 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
RFC1-210ENST00000505077 RBM6P78332 1123 aaKnown RBP13.57□□□□□ -0.24
RFC1-210ENST00000505077 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
RFC1-210ENST00000505077 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
RFC1-210ENST00000505077 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
RFC1-210ENST00000505077 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
RFC1-210ENST00000505077 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
RFC1-210ENST00000505077 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
RFC1-210ENST00000505077 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
RFC1-210ENST00000505077 NHSQ6T4R5 1651 aa13.55□□□□□ -0.24
RFC1-210ENST00000505077 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
RFC1-210ENST00000505077 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
RFC1-210ENST00000505077 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
RFC1-210ENST00000505077 MRC1P22897 1456 aa13.54□□□□□ -0.24
RFC1-210ENST00000505077 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
RFC1-210ENST00000505077 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
RFC1-210ENST00000505077 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 NFE2L2Q16236 605 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 DDB1Q16531 1140 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 CCDC146Q8IYE0 955 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 RGS17Q9UGC6 210 aaPredicted RBP13.53□□□□□ -0.24
RFC1-210ENST00000505077 EP400Q96L91 3159 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 PAPPAQ13219 1627 aa13.53□□□□□ -0.24
RFC1-210ENST00000505077 EXOC5O00471 708 aa13.52□□□□□ -0.25
RFC1-210ENST00000505077 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
RFC1-210ENST00000505077 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.25
RFC1-210ENST00000505077 RXRBP28702 533 aa13.52□□□□□ -0.25
RFC1-210ENST00000505077 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.25
RFC1-210ENST00000505077 BCL9O00512 1426 aa13.52□□□□□ -0.25
RFC1-210ENST00000505077 RGS12O14924 1447 aa13.52□□□□□ -0.25
RFC1-210ENST00000505077 UBR2Q8IWV8 1755 aa13.51□□□□□ -0.25
RFC1-210ENST00000505077 TMPOP42166 694 aaKnown RBP13.51□□□□□ -0.25
RFC1-210ENST00000505077 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
RFC1-210ENST00000505077 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
RFC1-210ENST00000505077 AKAP4Q5JQC9 854 aa13.51□□□□□ -0.25
RFC1-210ENST00000505077 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
RFC1-210ENST00000505077 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
RFC1-210ENST00000505077 BTAF1O14981 1849 aa13.5□□□□□ -0.25
RFC1-210ENST00000505077 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
RFC1-210ENST00000505077 APAF1O14727 1248 aa13.5□□□□□ -0.25
RFC1-210ENST00000505077 A0A0G2JS52 829 aa13.49□□□□□ -0.25
RFC1-210ENST00000505077 PHKG2P15735 406 aa13.49□□□□□ -0.25
RFC1-210ENST00000505077 MYT1Q01538 1121 aa13.49□□□□□ -0.25
RFC1-210ENST00000505077 RGPD3A6NKT7 1758 aaPredicted RBP13.49□□□□□ -0.25
RFC1-210ENST00000505077 RGPD4Q7Z3J3 1758 aa13.49□□□□□ -0.25
RFC1-210ENST00000505077 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
RFC1-210ENST00000505077 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
RFC1-210ENST00000505077 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
RFC1-210ENST00000505077 CYP27B1O15528 508 aa13.48□□□□□ -0.25
RFC1-210ENST00000505077 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
RFC1-210ENST00000505077 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
RFC1-210ENST00000505077 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
RFC1-210ENST00000505077 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
RFC1-210ENST00000505077 SEPT12Q8IYM1 358 aa13.48□□□□□ -0.25
RFC1-210ENST00000505077 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
RFC1-210ENST00000505077 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
RFC1-210ENST00000505077 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
RFC1-210ENST00000505077 ZBED9Q6R2W3 1325 aa13.47□□□□□ -0.25
RFC1-210ENST00000505077 RIPK4P57078 832 aa13.47□□□□□ -0.25
RFC1-210ENST00000505077 ZNF831Q5JPB2 1677 aa13.47□□□□□ -0.25
RFC1-210ENST00000505077 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.25
RFC1-210ENST00000505077 LAMB4A4D0S4 1761 aa13.46□□□□□ -0.25
RFC1-210ENST00000505077 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms