RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ITGA6P23229 1130 aa10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 RNF144AP50876 292 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 CC2D2BQ6DHV5 1058 aa10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 CUEDC1Q9NWM3 386 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 PCDHB11Q9Y5F2 797 aa10.82□□□□□ -0.68
DEPDC1B-203ENST00000505017 MCCD1P59942 119 aaPredicted RBP10.81□□□□□ -0.68
DEPDC1B-203ENST00000505017 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
DEPDC1B-203ENST00000505017 PRICKLE2Q7Z3G6 844 aa10.79□□□□□ -0.68
DEPDC1B-203ENST00000505017 VWA5B2Q8N398 1253 aa10.79□□□□□ -0.68
DEPDC1B-203ENST00000505017 PHTF2Q8N3S3 785 aa10.79□□□□□ -0.68
DEPDC1B-203ENST00000505017 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
DEPDC1B-203ENST00000505017 RHOQP17081 205 aa10.78□□□□□ -0.68
DEPDC1B-203ENST00000505017 LYSMD3Q7Z3D4 306 aa10.78□□□□□ -0.68
DEPDC1B-203ENST00000505017 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
DEPDC1B-203ENST00000505017 COL25A1Q9BXS0 654 aaPredicted RBP10.78□□□□□ -0.68
DEPDC1B-203ENST00000505017 APBB1O00213 710 aa10.77□□□□□ -0.69
DEPDC1B-203ENST00000505017 MEN1O00255 615 aa10.77□□□□□ -0.69
DEPDC1B-203ENST00000505017 CNTNAP3BQ96NU0 1288 aa10.77□□□□□ -0.69
DEPDC1B-203ENST00000505017 CNTNAP3Q9BZ76 1288 aa10.77□□□□□ -0.69
DEPDC1B-203ENST00000505017 MCM6Q14566 821 aa10.76□□□□□ -0.69
DEPDC1B-203ENST00000505017 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
DEPDC1B-203ENST00000505017 VAC14Q08AM6 782 aa10.75□□□□□ -0.69
DEPDC1B-203ENST00000505017 CLN3Q13286 438 aa10.75□□□□□ -0.69
DEPDC1B-203ENST00000505017 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
DEPDC1B-203ENST00000505017 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
DEPDC1B-203ENST00000505017 GPC1P35052 558 aa10.74□□□□□ -0.69
DEPDC1B-203ENST00000505017 RAB6BQ9NRW1 208 aa10.74□□□□□ -0.69
DEPDC1B-203ENST00000505017 HRH3Q9Y5N1 445 aa10.74□□□□□ -0.69
DEPDC1B-203ENST00000505017 CDC14CA4D256 554 aa10.73□□□□□ -0.69
DEPDC1B-203ENST00000505017 IL2RAP01589 272 aa10.73□□□□□ -0.69
DEPDC1B-203ENST00000505017 CYP2U1Q7Z449 544 aa10.73□□□□□ -0.69
DEPDC1B-203ENST00000505017 CHIC2Q9UKJ5 165 aa10.73□□□□□ -0.69
DEPDC1B-203ENST00000505017 STAU1O95793 577 aaKnown RBP10.72□□□□□ -0.69
DEPDC1B-203ENST00000505017 POU4F2Q12837 409 aa10.72□□□□□ -0.69
DEPDC1B-203ENST00000505017 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
DEPDC1B-203ENST00000505017 ABL2P42684 1182 aa10.71□□□□□ -0.69
DEPDC1B-203ENST00000505017 GAS6Q14393 721 aa10.71□□□□□ -0.69
DEPDC1B-203ENST00000505017 SV2AQ7L0J3 742 aa10.71□□□□□ -0.69
DEPDC1B-203ENST00000505017 WHAMMQ8TF30 809 aa10.71□□□□□ -0.69
DEPDC1B-203ENST00000505017 DBN1Q16643 649 aa10.69□□□□□ -0.7
DEPDC1B-203ENST00000505017 SPATA31C2B4DYI2 1134 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 GNRH1P01148 92 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 SLURP2P0DP57 97 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 NBPF10Q6P3W6 841 aaKnown RBP10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 ZNF837Q96EG3 531 aaPredicted RBP10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 NISCHQ9Y2I1 1504 aa10.68□□□□□ -0.7
DEPDC1B-203ENST00000505017 FAM181BA6NEQ2 426 aa10.67□□□□□ -0.7
DEPDC1B-203ENST00000505017 GSK3AP49840 483 aa10.67□□□□□ -0.7
DEPDC1B-203ENST00000505017 ZNF385CQ66K41 422 aaPredicted RBP10.67□□□□□ -0.7
DEPDC1B-203ENST00000505017 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
DEPDC1B-203ENST00000505017 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
DEPDC1B-203ENST00000505017 FHDC1Q9C0D6 1143 aaPredicted RBP10.67□□□□□ -0.7
DEPDC1B-203ENST00000505017 THBS1P07996 1170 aa10.66□□□□□ -0.7
DEPDC1B-203ENST00000505017 CENPCQ03188 943 aa10.66□□□□□ -0.7
DEPDC1B-203ENST00000505017 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
DEPDC1B-203ENST00000505017 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
DEPDC1B-203ENST00000505017 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
DEPDC1B-203ENST00000505017 DYRK1BQ9Y463 629 aa10.66□□□□□ -0.7
DEPDC1B-203ENST00000505017 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
DEPDC1B-203ENST00000505017 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.7
DEPDC1B-203ENST00000505017 RNF135Q8IUD6 432 aa10.64□□□□□ -0.71
DEPDC1B-203ENST00000505017 ETNK1Q9HBU6 452 aa10.64□□□□□ -0.71
DEPDC1B-203ENST00000505017 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
DEPDC1B-203ENST00000505017 GPR25O00155 361 aa10.63□□□□□ -0.71
DEPDC1B-203ENST00000505017 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
DEPDC1B-203ENST00000505017 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
DEPDC1B-203ENST00000505017 MYCP01106 439 aaPredicted RBP10.62□□□□□ -0.71
DEPDC1B-203ENST00000505017 WDR44Q5JSH3 913 aa10.62□□□□□ -0.71
DEPDC1B-203ENST00000505017 WASLO00401 505 aaPredicted RBP10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 SCNN1DP51172 638 aa10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 WASHC4Q2M389 1173 aa10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 RIPOR1Q6ZS17 1223 aa10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 TAS1R3Q7RTX0 852 aa10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 GAS2L1Q99501 681 aaPredicted RBP10.61□□□□□ -0.71
DEPDC1B-203ENST00000505017 ARHGEF15O94989 841 aa10.6□□□□□ -0.71
DEPDC1B-203ENST00000505017 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
DEPDC1B-203ENST00000505017 USP4Q13107 963 aa10.6□□□□□ -0.71
DEPDC1B-203ENST00000505017 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
DEPDC1B-203ENST00000505017 ADAMTS8Q9UP79 889 aa10.6□□□□□ -0.71
DEPDC1B-203ENST00000505017 PHKA2P46019 1235 aa10.59□□□□□ -0.71
DEPDC1B-203ENST00000505017 PLPP7Q8NBV4 271 aa10.59□□□□□ -0.71
DEPDC1B-203ENST00000505017 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
DEPDC1B-203ENST00000505017 ALG2Q9H553 416 aa10.59□□□□□ -0.71
DEPDC1B-203ENST00000505017 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
DEPDC1B-203ENST00000505017 LYPD4Q6UWN0 246 aa10.58□□□□□ -0.72
DEPDC1B-203ENST00000505017 ZSCAN10Q96SZ4 725 aaPredicted RBP10.58□□□□□ -0.72
DEPDC1B-203ENST00000505017 UBAP2LQ14157 1087 aaKnown RBP10.57□□□□□ -0.72
DEPDC1B-203ENST00000505017 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
DEPDC1B-203ENST00000505017 GMCL1Q96IK5 515 aa10.57□□□□□ -0.72
DEPDC1B-203ENST00000505017 F11P03951 625 aa10.56□□□□□ -0.72
DEPDC1B-203ENST00000505017 SRSF11Q05519 484 aaKnown RBP10.56□□□□□ -0.72
DEPDC1B-203ENST00000505017 ADAMTS19Q8TE59 1207 aa10.56□□□□□ -0.72
DEPDC1B-203ENST00000505017 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms