RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 PRDM11Q9NQV5 511 aa12.46□□□□□ -0.42
CDH6-202ENST00000504835 SBF2Q86WG5 1849 aa12.45□□□□□ -0.42
CDH6-202ENST00000504835 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
CDH6-202ENST00000504835 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
CDH6-202ENST00000504835 HRCP23327 699 aa12.45□□□□□ -0.42
CDH6-202ENST00000504835 PTGER2P43116 358 aa12.45□□□□□ -0.42
CDH6-202ENST00000504835 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
CDH6-202ENST00000504835 SOX12O15370 315 aa12.44□□□□□ -0.42
CDH6-202ENST00000504835 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
CDH6-202ENST00000504835 CDK19Q9BWU1 502 aa12.44□□□□□ -0.42
CDH6-202ENST00000504835 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
CDH6-202ENST00000504835 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
CDH6-202ENST00000504835 ACEP12821 1306 aa12.43□□□□□ -0.42
CDH6-202ENST00000504835 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
CDH6-202ENST00000504835 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
CDH6-202ENST00000504835 ZC3H6P61129 1189 aaKnown RBP12.43□□□□□ -0.42
CDH6-202ENST00000504835 COL18A1P39060 1754 aa12.42□□□□□ -0.42
CDH6-202ENST00000504835 EZH2Q15910 746 aaKnown RBP12.42□□□□□ -0.42
CDH6-202ENST00000504835 NBPF8Q3BBV2 869 aa12.42□□□□□ -0.42
CDH6-202ENST00000504835 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
CDH6-202ENST00000504835 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
CDH6-202ENST00000504835 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
CDH6-202ENST00000504835 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
CDH6-202ENST00000504835 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
CDH6-202ENST00000504835 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
CDH6-202ENST00000504835 USP19O94966 1318 aa12.4□□□□□ -0.42
CDH6-202ENST00000504835 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
CDH6-202ENST00000504835 AKAP12Q02952 1782 aa12.4□□□□□ -0.42
CDH6-202ENST00000504835 TRIM37O94972 964 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 CPDO75976 1380 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
CDH6-202ENST00000504835 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
CDH6-202ENST00000504835 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
CDH6-202ENST00000504835 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
CDH6-202ENST00000504835 FAM196AQ6ZSG2 479 aa12.38□□□□□ -0.43
CDH6-202ENST00000504835 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
CDH6-202ENST00000504835 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
CDH6-202ENST00000504835 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
CDH6-202ENST00000504835 SLIT3O75094 1523 aa12.37□□□□□ -0.43
CDH6-202ENST00000504835 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
CDH6-202ENST00000504835 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
CDH6-202ENST00000504835 APBA3O96018 575 aa12.35□□□□□ -0.43
CDH6-202ENST00000504835 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
CDH6-202ENST00000504835 GCP02774 474 aa12.35□□□□□ -0.43
CDH6-202ENST00000504835 EVA1CP58658 441 aa12.35□□□□□ -0.43
CDH6-202ENST00000504835 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
CDH6-202ENST00000504835 USP6P35125 1406 aa12.34□□□□□ -0.43
CDH6-202ENST00000504835 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
CDH6-202ENST00000504835 CASZ1Q86V15 1759 aa12.33□□□□□ -0.44
CDH6-202ENST00000504835 SRPK2P78362 688 aaKnown RBP12.33□□□□□ -0.44
CDH6-202ENST00000504835 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
CDH6-202ENST00000504835 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
CDH6-202ENST00000504835 THRAP3Q9Y2W1 955 aaKnown RBP12.32□□□□□ -0.44
CDH6-202ENST00000504835 CRB1P82279 1406 aa12.32□□□□□ -0.44
CDH6-202ENST00000504835 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
CDH6-202ENST00000504835 BRD4O60885 1362 aaPredicted RBP12.32□□□□□ -0.44
CDH6-202ENST00000504835 ARSIQ5FYB1 569 aa12.3□□□□□ -0.44
CDH6-202ENST00000504835 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
CDH6-202ENST00000504835 CABP1Q9NZU7 370 aa12.3□□□□□ -0.44
CDH6-202ENST00000504835 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
CDH6-202ENST00000504835 USP54Q70EL1 1684 aa12.3□□□□□ -0.44
CDH6-202ENST00000504835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
CDH6-202ENST00000504835 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
CDH6-202ENST00000504835 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
CDH6-202ENST00000504835 LTN1O94822 1766 aa12.29□□□□□ -0.44
CDH6-202ENST00000504835 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
CDH6-202ENST00000504835 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
CDH6-202ENST00000504835 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
CDH6-202ENST00000504835 NFAT5O94916 1531 aa12.29□□□□□ -0.44
CDH6-202ENST00000504835 PTF1AQ7RTS3 328 aa12.29□□□□□ -0.44
CDH6-202ENST00000504835 NLRP6P59044 892 aa12.28□□□□□ -0.44
CDH6-202ENST00000504835 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
CDH6-202ENST00000504835 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
CDH6-202ENST00000504835 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.44
CDH6-202ENST00000504835 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.44
CDH6-202ENST00000504835 L3MBTL2Q969R5 705 aa12.27□□□□□ -0.44
CDH6-202ENST00000504835 MYOM1P52179 1685 aa12.26□□□□□ -0.45
CDH6-202ENST00000504835 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
CDH6-202ENST00000504835 WDR17Q8IZU2 1322 aa12.25□□□□□ -0.45
CDH6-202ENST00000504835 NHSQ6T4R5 1651 aa12.25□□□□□ -0.45
CDH6-202ENST00000504835 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
CDH6-202ENST00000504835 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
CDH6-202ENST00000504835 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
CDH6-202ENST00000504835 KAT6BQ8WYB5 2073 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 BCL9O00512 1426 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 DDB1Q16531 1140 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 TOM1L2Q6ZVM7 507 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 ARHGEF25Q86VW2 580 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 MARCH10Q8NA82 808 aaPredicted RBP12.24□□□□□ -0.45
CDH6-202ENST00000504835 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 ABCC6O95255 1503 aa12.24□□□□□ -0.45
CDH6-202ENST00000504835 PLSCR1O15162 318 aa12.23□□□□□ -0.45
CDH6-202ENST00000504835 LSM11P83369 360 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH6-202ENST00000504835 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
CDH6-202ENST00000504835 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
CDH6-202ENST00000504835 BTAF1O14981 1849 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms