RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SBF2Q86WG5 1849 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 AEBP1Q8IUX7 1158 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 MIER1Q8N108 512 aa6.69□□□□□ -1.34
LMNB1-208ENST00000504788 PNISRQ8TF01 805 aaKnown RBP6.69□□□□□ -1.34
LMNB1-208ENST00000504788 RGS12O14924 1447 aa6.68□□□□□ -1.34
LMNB1-208ENST00000504788 HAP1P54257 671 aaPredicted RBP6.68□□□□□ -1.34
LMNB1-208ENST00000504788 BARGINQ6ZT62 677 aa6.68□□□□□ -1.34
LMNB1-208ENST00000504788 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
LMNB1-208ENST00000504788 PLEKHF1Q96S99 279 aa6.68□□□□□ -1.34
LMNB1-208ENST00000504788 PPM1GO15355 546 aaPredicted RBP6.67□□□□□ -1.34
LMNB1-208ENST00000504788 DIAPH1O60610 1272 aaKnown RBP6.67□□□□□ -1.34
LMNB1-208ENST00000504788 FXR2P51116 673 aaKnown RBP eCLIP6.67□□□□□ -1.341e-6■■■■□ 19.3
LMNB1-208ENST00000504788 RSPH6AQ9H0K4 717 aa6.67□□□□□ -1.34
LMNB1-208ENST00000504788 TRPC5Q9UL62 973 aaPredicted RBP6.67□□□□□ -1.34
LMNB1-208ENST00000504788 SIPA1L3O60292 1781 aaPredicted RBP6.67□□□□□ -1.34
LMNB1-208ENST00000504788 ANP32CO43423 234 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 ZNF772Q68DY9 489 aaPredicted RBP6.66□□□□□ -1.34
LMNB1-208ENST00000504788 USHBP1Q8N6Y0 703 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 QTRT2Q9H974 415 aaKnown RBP6.66□□□□□ -1.34
LMNB1-208ENST00000504788 STRN4Q9NRL3 753 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 THRAP3Q9Y2W1 955 aaKnown RBP6.66□□□□□ -1.34
LMNB1-208ENST00000504788 SCN11AQ9UI33 1791 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 TNS2Q63HR2 1409 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 ZBTB7CA1YPR0 619 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 CCER2I3L3R5 266 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 MEX3CQ5U5Q3 659 aaKnown RBP6.66□□□□□ -1.34
LMNB1-208ENST00000504788 TCP11L2Q8N4U5 519 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 LTV1Q96GA3 475 aaPredicted RBP6.66□□□□□ -1.34
LMNB1-208ENST00000504788 PHACTR3Q96KR7 559 aa6.66□□□□□ -1.34
LMNB1-208ENST00000504788 ITGB4P16144 1822 aa6.65□□□□□ -1.34
LMNB1-208ENST00000504788 BCL9O00512 1426 aa6.65□□□□□ -1.34
LMNB1-208ENST00000504788 RBM6P78332 1123 aaKnown RBP6.65□□□□□ -1.34
LMNB1-208ENST00000504788 TOM1L2Q6ZVM7 507 aa6.65□□□□□ -1.34
LMNB1-208ENST00000504788 ADAMTS8Q9UP79 889 aa6.65□□□□□ -1.34
LMNB1-208ENST00000504788 SULT6B1Q6IMI4 303 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 NLRP2Q9NX02 1062 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 DOT1LQ8TEK3 1739 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 CYP27B1O15528 508 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 FCHSD2O94868 740 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 HMOX1P09601 288 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 EVA1CP58658 441 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 FAM98CQ17RN3 349 aaKnown RBP6.64□□□□□ -1.35
LMNB1-208ENST00000504788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.64□□□□□ -1.351e-6■■■□□ 16.7
LMNB1-208ENST00000504788 USP35Q9P2H5 1018 aa6.64□□□□□ -1.35
LMNB1-208ENST00000504788 TNS1Q9HBL0 1735 aaKnown RBP6.64□□□□□ -1.35
LMNB1-208ENST00000504788 PAPPAQ13219 1627 aa6.63□□□□□ -1.35
LMNB1-208ENST00000504788 KDM6AO15550 1401 aaPredicted RBP6.63□□□□□ -1.35
LMNB1-208ENST00000504788 NHSQ6T4R5 1651 aa6.63□□□□□ -1.35
LMNB1-208ENST00000504788 MRC1P22897 1456 aa6.63□□□□□ -1.35
LMNB1-208ENST00000504788 IL2RBP14784 551 aa6.63□□□□□ -1.35
LMNB1-208ENST00000504788 MARCH10Q8NA82 808 aaPredicted RBP6.63□□□□□ -1.35
LMNB1-208ENST00000504788 CFAP53Q96M91 514 aa6.63□□□□□ -1.35
LMNB1-208ENST00000504788 MRS2Q9HD23 443 aa6.63□□□□□ -1.35
LMNB1-208ENST00000504788 CSB-PGBD3P0DP91 1061 aa6.62□□□□□ -1.35
LMNB1-208ENST00000504788 PRKAR2BP31323 418 aa6.62□□□□□ -1.35
LMNB1-208ENST00000504788 NKX1-1Q15270 411 aaPredicted RBP6.62□□□□□ -1.35
LMNB1-208ENST00000504788 MTHFSDQ2M296 383 aaKnown RBP6.62□□□□□ -1.35
LMNB1-208ENST00000504788 UBR2Q8IWV8 1755 aa6.62□□□□□ -1.35
LMNB1-208ENST00000504788 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
LMNB1-208ENST00000504788 RXRBP28702 533 aa6.62□□□□□ -1.35
LMNB1-208ENST00000504788 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
LMNB1-208ENST00000504788 LHX8Q68G74 356 aa6.62□□□□□ -1.35
LMNB1-208ENST00000504788 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
LMNB1-208ENST00000504788 CDCA7Q9BWT1 371 aaPredicted RBP6.62□□□□□ -1.35
LMNB1-208ENST00000504788 CEMIPQ8WUJ3 1361 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 KDM3BQ7LBC6 1761 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 CICQ96RK0 1608 aaPredicted RBP6.61□□□□□ -1.35
LMNB1-208ENST00000504788 LY75O60449 1722 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 PITPNM1O00562 1244 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 U2SURPO15042 1029 aaKnown RBP6.61□□□□□ -1.35
LMNB1-208ENST00000504788 PHKG2P15735 406 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 ILDR2Q71H61 639 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 BTAF1O14981 1849 aa6.61□□□□□ -1.35
LMNB1-208ENST00000504788 MYCNP04198 464 aaPredicted RBP6.6□□□□□ -1.35
LMNB1-208ENST00000504788 PTF1AQ7RTS3 328 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 ZCRB1Q8TBF4 217 aaKnown RBP6.6□□□□□ -1.35
LMNB1-208ENST00000504788 NUDCQ9Y266 331 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 ZNF521Q96K83 1311 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 ZNF831Q5JPB2 1677 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 RGPD3A6NKT7 1758 aaPredicted RBP6.6□□□□□ -1.35
LMNB1-208ENST00000504788 RGPD4Q7Z3J3 1758 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 DDB1Q16531 1140 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 FAM182BQ5T319 152 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 IL17REQ8NFR9 667 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 RAPGEF4Q8WZA2 1011 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 TRIM35Q9UPQ4 493 aa6.6□□□□□ -1.35
LMNB1-208ENST00000504788 PCDH11XQ9BZA7 1347 aa6.59□□□□□ -1.35
LMNB1-208ENST00000504788 PCDH11YQ9BZA8 1340 aa6.59□□□□□ -1.35
LMNB1-208ENST00000504788 TATP17735 454 aaPredicted RBP6.59□□□□□ -1.35
LMNB1-208ENST00000504788 AMOTQ4VCS5 1084 aa6.59□□□□□ -1.35
LMNB1-208ENST00000504788 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
LMNB1-208ENST00000504788 CCDC9Q9Y3X0 531 aaKnown RBP6.59□□□□□ -1.35
LMNB1-208ENST00000504788 EXOC5O00471 708 aa6.58□□□□□ -1.36
LMNB1-208ENST00000504788 TMPOP42166 694 aaKnown RBP6.58□□□□□ -1.36
LMNB1-208ENST00000504788 CCDC146Q8IYE0 955 aa6.58□□□□□ -1.36
LMNB1-208ENST00000504788 LGR6Q9HBX8 967 aa6.58□□□□□ -1.36
LMNB1-208ENST00000504788 RREB1Q92766 1687 aa6.58□□□□□ -1.36
LMNB1-208ENST00000504788 MAP3K5Q99683 1374 aa6.58□□□□□ -1.36
LMNB1-208ENST00000504788 TAF1LQ8IZX4 1826 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 APAF1O14727 1248 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms