RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PTCH1Q13635 1447 aa5.66□□□□□ -1.5
USP46-205ENST00000504078 BCL9LQ86UU0 1499 aa5.66□□□□□ -1.5
USP46-205ENST00000504078 NUTM2FA1L443 756 aa5.66□□□□□ -1.5
USP46-205ENST00000504078 ZNF326Q5BKZ1 582 aaKnown RBP5.66□□□□□ -1.5
USP46-205ENST00000504078 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
USP46-205ENST00000504078 LRRC59Q96AG4 307 aaKnown RBP5.66□□□□□ -1.5
USP46-205ENST00000504078 DDX27Q96GQ7 796 aaKnown RBP5.66□□□□□ -1.5
USP46-205ENST00000504078 TRPC5Q9UL62 973 aaPredicted RBP5.66□□□□□ -1.5
USP46-205ENST00000504078 ROBO2Q9HCK4 1378 aa5.66□□□□□ -1.5
USP46-205ENST00000504078 BLMP54132 1417 aaPredicted RBP5.65□□□□□ -1.5
USP46-205ENST00000504078 PXDNQ92626 1479 aa5.65□□□□□ -1.5
USP46-205ENST00000504078 CDC42BPGQ6DT37 1551 aa5.65□□□□□ -1.5
USP46-205ENST00000504078 ITGAEP38570 1179 aa5.65□□□□□ -1.5
USP46-205ENST00000504078 MYT1Q01538 1121 aa5.65□□□□□ -1.5
USP46-205ENST00000504078 LARP6Q9BRS8 491 aaKnown RBP5.65□□□□□ -1.5
USP46-205ENST00000504078 MFSD10Q14728 455 aa5.64□□□□□ -1.51
USP46-205ENST00000504078 PKDCCQ504Y2 493 aa5.64□□□□□ -1.51
USP46-205ENST00000504078 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
USP46-205ENST00000504078 SOS2Q07890 1332 aaPredicted RBP5.64□□□□□ -1.51
USP46-205ENST00000504078 NRAPQ86VF7 1730 aa5.63□□□□□ -1.51
USP46-205ENST00000504078 TNS1Q9HBL0 1735 aaKnown RBP5.63□□□□□ -1.51
USP46-205ENST00000504078 HDGFP51858 240 aaKnown RBP5.63□□□□□ -1.51
USP46-205ENST00000504078 EMILIN3Q9NT22 766 aa5.63□□□□□ -1.51
USP46-205ENST00000504078 STK17AQ9UEE5 414 aa5.63□□□□□ -1.51
USP46-205ENST00000504078 NUP155O75694 1391 aa5.63□□□□□ -1.51
USP46-205ENST00000504078 KIF1BO60333 1816 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 FAM182BQ5T319 152 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 FNBP4Q8N3X1 1017 aaPredicted RBP5.62□□□□□ -1.51
USP46-205ENST00000504078 ZNF516Q92618 1163 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 GJD4Q96KN9 370 aaPredicted RBP5.62□□□□□ -1.51
USP46-205ENST00000504078 CCDC9Q9Y3X0 531 aaKnown RBP5.62□□□□□ -1.51
USP46-205ENST00000504078 NAIPQ13075 1403 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 SLIT2O94813 1529 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 FMN2Q9NZ56 1722 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 IFT172Q9UG01 1749 aa5.62□□□□□ -1.51
USP46-205ENST00000504078 POTECB2RU33 542 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PPLO60437 1756 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 RGPD1P0DJD0 1748 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PRR20EP86478 221 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PRR20CP86479 221 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PRR20DP86480 221 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PRR20BP86481 221 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PRR20AP86496 221 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 SF3B2Q13435 895 aaKnown RBP5.61□□□□□ -1.51
USP46-205ENST00000504078 ESCO1Q5FWF5 840 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 TRIM67Q6ZTA4 783 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 SAMD7Q7Z3H4 446 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 NECTIN2Q92692 538 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 PLEKHH1Q9ULM0 1364 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 CAMTA1Q9Y6Y1 1673 aa5.61□□□□□ -1.51
USP46-205ENST00000504078 KIF1AQ12756 1690 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 NPHP3Q7Z494 1330 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 FOXO3O43524 673 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 HRCP23327 699 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 HAP1P54257 671 aaPredicted RBP5.6□□□□□ -1.51
USP46-205ENST00000504078 R3HDM1Q15032 1099 aaKnown RBP5.6□□□□□ -1.51
USP46-205ENST00000504078 NKX1-1Q15270 411 aaPredicted RBP5.6□□□□□ -1.51
USP46-205ENST00000504078 SEPT12Q8IYM1 358 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 CABLES1Q8TDN4 633 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 TSKSQ9UJT2 592 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 RGPD8O14715 1765 aaPredicted RBP5.6□□□□□ -1.51
USP46-205ENST00000504078 KNDC1Q76NI1 1749 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 NWD2Q9ULI1 1742 aa5.6□□□□□ -1.51
USP46-205ENST00000504078 ADGRB2O60241 1585 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 TNS3Q68CZ2 1445 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 SLC19A1P41440 591 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 PPARGC1BQ86YN6 1023 aaKnown RBP5.59□□□□□ -1.51
USP46-205ENST00000504078 UNC5CLQ8IV45 518 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 NKX2-3Q8TAU0 364 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 STK26Q9P289 416 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 NUP188Q5SRE5 1749 aa5.59□□□□□ -1.51
USP46-205ENST00000504078 HFM1A2PYH4 1435 aa5.58□□□□□ -1.52
USP46-205ENST00000504078 YY1P25490 414 aa5.58□□□□□ -1.52
USP46-205ENST00000504078 EN1Q05925 392 aaPredicted RBP5.58□□□□□ -1.52
USP46-205ENST00000504078 LMOD2Q6P5Q4 547 aa5.58□□□□□ -1.52
USP46-205ENST00000504078 THSD7AQ9UPZ6 1657 aa5.58□□□□□ -1.52
USP46-205ENST00000504078 CCDC144AA2RUR9 1427 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 PRAG1Q86YV5 1406 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 ROCK1Q13464 1354 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 RREB1Q92766 1687 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 BAG6P46379 1132 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 INSM1Q01101 510 aaPredicted RBP5.57□□□□□ -1.52
USP46-205ENST00000504078 KRT27Q7Z3Y8 459 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 WAPLQ7Z5K2 1190 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 ZNF598Q86UK7 904 aaKnown RBP5.57□□□□□ -1.52
USP46-205ENST00000504078 CCDC125Q86Z20 511 aa5.57□□□□□ -1.52
USP46-205ENST00000504078 SPATA31A3Q5VYP0 1347 aa5.56□□□□□ -1.52
USP46-205ENST00000504078 WFS1O76024 890 aa5.56□□□□□ -1.52
USP46-205ENST00000504078 APLP1P51693 650 aa5.56□□□□□ -1.52
USP46-205ENST00000504078 SPRYD7Q5W111 196 aa5.56□□□□□ -1.52
USP46-205ENST00000504078 TRPM3Q9HCF6 1732 aaPredicted RBP5.56□□□□□ -1.52
USP46-205ENST00000504078 CRYBG1Q9Y4K1 1723 aa5.56□□□□□ -1.52
USP46-205ENST00000504078 RRBP1Q9P2E9 1410 aaKnown RBP5.56□□□□□ -1.52
USP46-205ENST00000504078 NRKQ7Z2Y5 1582 aa5.55□□□□□ -1.52
USP46-205ENST00000504078 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
USP46-205ENST00000504078 WIPF1O43516 503 aa5.55□□□□□ -1.52
USP46-205ENST00000504078 SAFB2Q14151 953 aaKnown RBP eCLIP5.55□□□□□ -1.52
USP46-205ENST00000504078 VPS72Q15906 364 aa5.55□□□□□ -1.52
USP46-205ENST00000504078 EZH2Q15910 746 aaKnown RBP5.55□□□□□ -1.52
USP46-205ENST00000504078 CDCA7LQ96GN5 454 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms